(data stored in ACNUC7421 zone)

HOGENOM: BACMD_1_PE101

ID   BACMD_1_PE101                        STANDARD;      PRT;   1197 AA.
AC   BACMD_1_PE101; D5D9P8;
DT   00-JAN-0000 (Rel. 1, Created)
DT   00-JAN-0000 (Rel. 2, Last sequence update)
DT   00-JAN-0000 (Rel. 3, Last annotation update)
DE   RecName: Full=DNA-directed RNA polymerase; EC=2.7.7 6; (BACMD_1.PE101).
GN   Name=rpoC; OrderedLocusNames=BMD_0127;
OS   BACILLUS MEGATERIUM DSM 319.
OC   Bacteria; Firmicutes; Bacillales; Bacillaceae; Bacillus.
OX   NCBI_TaxID=592022;
RN   [0]
RP   -.;
RG   -.;
RL   -.;
CC   -!- SEQ. DATA ORIGIN: Translated from the HOGENOM CDS BACMD_1.PE101.
CC       Bacillus megaterium DSM 319 chromosome, complete genome.
CC       sequence.
CC   -!- ANNOTATIONS ORIGIN:D5D9P8_BACMD
CC   -!- CATALYTIC ACTIVITY: Nucleoside triphosphate + RNA(n) = diphosphate
CC       + RNA(n+1).
CC   -!- SIMILARITY: Belongs to the RNA polymerase beta' chain family.
CC   -!- GENE_FAMILY: HOG000218387 [ FAMILY / ALN / TREE ]
DR   UniProtKB/Swiss-Prot; D5D9P8; -.
DR   EMBL; CP001982; ADF37068.1; -; Genomic_DNA.
DR   RefSeq; YP_003595418.1; NC_014103.1.
DR   EnsemblBacteria; EBBACT00000423770; EBBACP00000416544; EBBACG00000421935.
DR   GeneID; 9115518; -.
DR   GenomeReviews; CP001982_GR; BMD_0127.
DR   KEGG; bmd:BMD_0127; -.
DR   GeneTree; EBGT00050000002028; -.
DR   GO; GO:0003677; F:DNA binding; IEA:HAMAP.
DR   GO; GO:0003899; F:DNA-directed RNA polymerase activity; IEA:HAMAP.
DR   HAMAP; MF_01322; RNApol_bact_RpoC; 1; -.
DR   InterPro; IPR012754; DNA-dir_RpoC_beta_prime.
DR   InterPro; IPR000722; RNA_pol_asu.
DR   InterPro; IPR006592; RNA_pol_N.
DR   InterPro; IPR007080; RNA_pol_Rpb1_1.
DR   InterPro; IPR007066; RNA_pol_Rpb1_3.
DR   InterPro; IPR007083; RNA_pol_Rpb1_4.
DR   InterPro; IPR007081; RNA_pol_Rpb1_5.
DR   Pfam; PF04997; RNA_pol_Rpb1_1; 1.
DR   Pfam; PF00623; RNA_pol_Rpb1_2; 1.
DR   Pfam; PF04983; RNA_pol_Rpb1_3; 1.
DR   Pfam; PF05000; RNA_pol_Rpb1_4; 1.
DR   Pfam; PF04998; RNA_pol_Rpb1_5; 1.
DR   SMART; SM00663; RPOLA_N; 1.
DR   TIGRFAMs; TIGR02386; RpoC_TIGR; 1.
DR   HOGENOMDNA; BACMD_1.PE101; -.
KW   DNA-directed RNA polymerase subunit beta';
KW   Complete proteome; DNA-directed RNA polymerase;
KW   Nucleotidyltransferase; Transcription; Transferase.
SQ   SEQUENCE   1197 AA;  UNKNOWN MW;  UNKNOWN CRC64;
     MLDVNNFEYM KIGLASPDKI RSWSYGEVKK PETINYRTLK PEKDGLFCER IFGPQKDWEC
     HCGKYKRVRY KGVVCDRCGV EVTRAKVRRE RMGHIELAAP VSHIWYFKGI PSRMGLVLDM
     SPRALEEIIY FASYVVTDAG DTPLEKKQLL SEKEYRAYRE KYGQTFHAAM GAEAVKKLLH
     DIDLDKEVDA LKEELKTAQG QRRTRAIKRL EVLEAFRHSG NEPSWMILDV LPVIPPELRP
     MVQLDGGRFA TSDLNDLYRR VINRNNRLKR LLDLGAPSII VQNEKRMLQE AVDALIDNGR
     RGRPVTGPGN RPLKSLSHML KGKQGRFRQN LLGKRVDYSG RSVIVVGPNL KMYQCGLPKE
     MALELFKPFV MKELVERGLA HNIKSAKRKI ERVQPEVWDV LESVIKEHPV LLNRAPTLHR
     LGIQAFEPTL VEGRAIRLHP LVCTAYNADF DGDQMAVHVP LSAEAQAEAR ILMLAAQNIL
     NPKDGKPVVT PSQDMVLGNY YLTLEREEAV GEGMVFKDTN EALLAYQNGY VHLHTRVGVY
     AGSLNNETFT EAQNQQLLVT TVGKLVFNEI LPKSFPYINE PTRENLEVKT PEKYFVEKGA
     DVKEFIKNQP AIAPFKKKIL GNIIAEVFKR FKITETSKML DRMKDLGFKY STKAGITVGV
     ADIVVLGEKE VILTEAQAKV DNVLKQFRRG LITEDERYER VISVWSSAKD VIQGKLMASL
     DKRNPIFMMS DSGARGNASN FTQLAGMRGL MANPSGRIIE LPIKSSFREG LTVLEYFIST
     HGARKGLADT ALKTADSGYL TRRLVDVAQD VIVRDDDCGT DRGILAVAIK EGTEEIEKLD
     ERLIGRYARK TLLHPGTNEV LVKENELITE DLAETIVDAG VEEVWIRSAF TCNTRHGVCK
     KCYGRNLATG SEVEVGEAVG IIAAQSIGEP GTQLTMRTFH TGGVAGDDIT QGLPRIQEIF
     EARNPKGQAV ISEIEGTIAG ISEGRDRQHE ITVQGEIETR SYTAPYSARL KVIEGQRIAR
     GQELTEGSID PKELLKVKDI TAVQEYLLRE VQKVYRMQGV EIGDKHVEVM VRQMLRKVRV
     MDSGDTDVLP GSLLDIHQFT DANEKVLLEG NRPATGRPVL LGITKASLET DSFLSAASFQ
     ETTRVLTDAA IKGKRDELLG LKENVIIGKL VPAGTGMTRY RNAEPIKNQA EETVTID
//

If you have problems or comments...

PBIL Back to PBIL home page