(data stored in ACNUC7421 zone)

HOGENOM: BRJAP1_1_PE5562

ID   BRJAP1_1_PE5562                      STANDARD;      PRT;   650 AA.
AC   BRJAP1_1_PE5562; Q89IS2;
DT   00-JAN-0000 (Rel. 1, Created)
DT   00-JAN-0000 (Rel. 2, Last sequence update)
DT   00-JAN-0000 (Rel. 3, Last annotation update)
DE   SubName: Full=Cold-shock dead-box protein A; (BRJAP1_1.PE5562).
GN   Name=deaD; OrderedLocusNames=bll5562;
OS   BRADYRHIZOBIUM JAPONICUM USDA 110.
OC   Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales;
OC   Bradyrhizobiaceae; Bradyrhizobium.
OX   NCBI_TaxID=224911;
RN   [0]
RP   -.;
RG   -.;
RL   -.;
CC   -!- SEQ. DATA ORIGIN: Translated from the HOGENOM CDS BRJAP1_1.PE5562.
CC       Bradyrhizobium japonicum USDA 110 chromosome, complete genome.
CC       1..5047 annotated by Ensembl Genomes
CC   -!- ANNOTATIONS ORIGIN:Q89IS2_BRAJA
CC   -!- SIMILARITY: Belongs to the DEAD box helicase family.
CC   -!- GENE_FAMILY: HOG000268794 [ FAMILY / ALN / TREE ]
DR   UniProtKB/Swiss-Prot; Q89IS2; -.
DR   EMBL; BA000040; BAC50827.1; -; Genomic_DNA.
DR   RefSeq; NP_772202.1; NC_004463.1.
DR   HSSP; P10081; 1QDE.
DR   ProteinModelPortal; Q89IS2; -.
DR   GeneID; 1053027; -.
DR   GenomeReviews; BA000040_GR; bll5562.
DR   KEGG; bja:bll5562; -.
DR   NMPDR; fig|224911.1.peg.5562; -.
DR   OMA; MQHRSGR; -.
DR   ProtClustDB; CLSK911385; -.
DR   GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR   GO; GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.
DR   GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR   InterPro; IPR005580; DbpA_RNA-bd.
DR   InterPro; IPR014001; DEAD-like_helicase.
DR   InterPro; IPR011545; DNA/RNA_helicase_DEAD/DEAH_N.
DR   InterPro; IPR001650; Helicase_C.
DR   InterPro; IPR000629; RNA-helicase_DEAD-box_CS.
DR   InterPro; IPR014014; RNA_helicase_DEAD_Q_motif.
DR   Pfam; PF03880; DbpA; 1.
DR   Pfam; PF00270; DEAD; 1.
DR   Pfam; PF00271; Helicase_C; 1.
DR   SMART; SM00487; DEXDc; 1.
DR   SMART; SM00490; HELICc; 1.
DR   PROSITE; PS00039; DEAD_ATP_HELICASE; 1.
DR   PROSITE; PS51192; HELICASE_ATP_BIND_1; 1.
DR   PROSITE; PS51194; HELICASE_CTER; 1.
DR   PROSITE; PS51195; Q_MOTIF; 1.
DR   HOGENOMDNA; BRJAP1_1.PE5562; -.
KW   cold-shock dead-box protein A;
KW   ATP-binding; Complete proteome; Helicase; Hydrolase;
KW   Nucleotide-binding; Reference proteome.
SQ   SEQUENCE   650 AA;  UNKNOWN MW;  UNKNOWN CRC64;
     MSFPTMSPPL ARALAERNYD RPTPVQLAVL TEEAAGRDLL VSAQTGSGKT LAYGLALAKD
     LLDGIERFER AGAPLALIVA PTRELALQVQ RELAWLYEHA DGRVVSCVGG MDPRREQREL
     AAGAHIVVGT PGRLCDHLRR GRLDISELKA VVLDEADEML NLGFREDMEF ILETTPETRR
     TLLFSATFPR GIVALAKQYQ QQAFRIEVAG DEGGHADIEY RAIRIAPADV EHAVVNVLRF
     FEAPSALVFC STRDAVRHLQ AALLERGFSV VALSGELTQN ERTLALQSLR DGRARVCVAT
     DVAARGIDLP SLDLVIQADL PNDAEVMQHR SGRTGRAGRK GTSVLLVPPA RRRRAELLLN
     LSGIDAVWGT APQADEIRKL DHERMKDVLF TEETTADDLV LAQALLAERS PEDIAAALAR
     LYRARLPSPE DIIDPGERAG RPRDDRGRDN VRAQGGDDRP ERARPKSGKS SSKHGMAEGS
     VWFRANIGRR KNAEARWLLP MICRRGGIDK GDIGAIKIMD TTTEFEISER VADSFAAKIK
     RPDKEDNIRL EPMADAPQRQ APSEERSKPP RRESGDSDHR ERRDDRPREA GFKPRSKAFG
     ERGPKFDDAS AFGKKKKHKN KPGHAGQPPA VTAWPVKGAP GKKAKKKHRG
//

If you have problems or comments...

PBIL Back to PBIL home page