(data stored in ACNUC9543 zone)

HOGENOM: CAEELIII_PE1563

ID   CAEELIII_PE1563                      STANDARD;      PRT;   739 AA.
AC   CAEELIII_PE1563; Q20875;
DT   00-JAN-0000 (Rel. 1, Created)
DT   00-JAN-0000 (Rel. 2, Last sequence update)
DT   00-JAN-0000 (Rel. 3, Last annotation update)
DE   RecName: Full=Putative pre-mRNA-splicing factor ATP-dependent RNA
DE   helicase F56D2.6; EC=3.6.4 13; (CAEELIII.PE1563).
GN   ORFNames=F56D2.6;
OS   CAENORHABDITIS ELEGANS.
OC   Eukaryota; Metazoa; Eumetazoa; Bilateria; Pseudocoelomata; Nematoda;
OC   Chromadorea; Rhabditida; Rhabditoidea; Rhabditidae; Peloderinae;
OC   Caenorhabditis.
OX   NCBI_TaxID=6239;
RN   [0]
RP   -.;
RG   -.;
RL   -.;
CC   -!- SEQ. DATA ORIGIN: Translated from the HOGENOM CDS CAEELIII.PE1563.
CC       Caenorhabditis elegans chromosome III WS210  sequence 1..13783685
CC       annotated by Ensembl
CC   -!- ANNOTATIONS ORIGIN:DHX15_CAEEL
CC   -!- FUNCTION: Pre-mRNA processing factor involved in disassembly of
CC       spliceosomes after the release of mature mRNA (By similarity).
CC   -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate.
CC   -!- SUBCELLULAR LOCATION: Nucleus (By similarity).
CC   -!- SIMILARITY: Belongs to the DEAD box helicase family. DEAH
CC       subfamily. DDX15/PRP43 sub-subfamily.
CC   -!- SIMILARITY: Contains 1 helicase ATP-binding domain.
CC   -!- SIMILARITY: Contains 1 helicase C-terminal domain.
CC   -!- GENE_FAMILY: HOG000175261 [ FAMILY / ALN / TREE ]
DR   HOGENOM:Caenorhabditis_elegans;F56D2.6;F56D2.6A;F56D2.6A.
DR   EMBL; U13644; - ;
DR   UniProtKB/Swiss-Prot; Q20875; -.
DR   EMBL; U13644; AAB52678.1; -; Genomic_DNA.
DR   PIR; T16482; T16482.
DR   RefSeq; NP_741147.1; NM_171130.3.
DR   UniGene; Cel.5656; -.
DR   ProteinModelPortal; Q20875; -.
DR   SMR; Q20875; 53-733.
DR   STRING; Q20875; -.
DR   PRIDE; Q20875; -.
DR   EnsemblMetazoa; F56D2.6a; F56D2.6a; F56D2.6.
DR   GeneID; 175771; -.
DR   KEGG; cel:F56D2.6; -.
DR   UCSC; F56D2.6a; c. elegans.
DR   CTD; 175771; -.
DR   WormBase; F56D2.6a; CE01334; WBGene00018967; -.
DR   eggNOG; meNOG04852; -.
DR   InParanoid; Q20875; -.
DR   OMA; VIYNEFV; -.
DR   PhylomeDB; Q20875; -.
DR   NextBio; 889592; -.
DR   ArrayExpress; Q20875; -.
DR   GO; GO:0030686; C:90S preribosome; ISS:UniProtKB.
DR   GO; GO:0005739; C:mitochondrion; ISS:UniProtKB.
DR   GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR   GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR   GO; GO:0004004; F:ATP-dependent RNA helicase activity; ISS:UniProtKB.
DR   GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR   GO; GO:0009792; P:embryo development ending in birth or egg hatching; IMP:WormBase.
DR   GO; GO:0040022; P:feminization of hermaphroditic germ-line; IMP:WormBase.
DR   GO; GO:0007281; P:germ cell development; IMP:WormBase.
DR   GO; GO:0040007; P:growth; IMP:WormBase.
DR   GO; GO:0040035; P:hermaphrodite genitalia development; IMP:WormBase.
DR   GO; GO:0040011; P:locomotion; IMP:WormBase.
DR   GO; GO:0002009; P:morphogenesis of an epithelium; IMP:WormBase.
DR   GO; GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
DR   GO; GO:0002119; P:nematode larval development; IMP:WormBase.
DR   GO; GO:0040010; P:positive regulation of growth rate; IMP:WormBase.
DR   GO; GO:0006898; P:receptor-mediated endocytosis; IMP:WormBase.
DR   GO; GO:0042127; P:regulation of cell proliferation; IMP:WormBase.
DR   GO; GO:0040020; P:regulation of meiosis; IMP:WormBase.
DR   GO; GO:0016246; P:RNA interference; IMP:WormBase.
DR   GO; GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
DR   GO; GO:0006364; P:rRNA processing; ISS:UniProtKB.
DR   InterPro; IPR003593; ATPase_AAA+_core.
DR   InterPro; IPR014001; DEAD-like_helicase.
DR   InterPro; IPR011545; DNA/RNA_helicase_DEAD/DEAH_N.
DR   InterPro; IPR011709; DUF1605.
DR   InterPro; IPR007502; Helicase-assoc_dom.
DR   InterPro; IPR001650; Helicase_C.
DR   Pfam; PF00270; DEAD; 1.
DR   Pfam; PF04408; HA2; 1.
DR   Pfam; PF00271; Helicase_C; 1.
DR   Pfam; PF07717; OB_NTP_bind; 1.
DR   SMART; SM00382; AAA; 1.
DR   SMART; SM00487; DEXDc; 1.
DR   SMART; SM00847; HA2; 1.
DR   SMART; SM00490; HELICc; 1.
DR   PROSITE; PS00690; DEAH_ATP_HELICASE; FALSE_NEG.
DR   PROSITE; PS51192; HELICASE_ATP_BIND_1; 1.
DR   PROSITE; PS51194; HELICASE_CTER; 1.
DR   HOGENOMDNA; CAEELIII.PE1563; -.
KW   F56D2.628310200367fold_1320000031; F56D2.6a.222210.62fold_1320000031;
KW   Q8MQ21_CAEEL; Q9TX84_CAEEL; U13644;
KW   ATP-binding; Complete proteome; Helicase; Hydrolase; mRNA processing;
KW   mRNA splicing; Nucleotide-binding; Nucleus; Reference proteome.
SQ   SEQUENCE   739 AA;  UNKNOWN MW;  UNKNOWN CRC64;
     MSSRHRLDLD GSGRGDRRRS PNRRSRSRSR SPHRRSSPDR KRQIGAVGNM KIQINPYNNQ
     PFSNRYWAIW EKRSQLPVWE YKEKFMELLR NNQCITLVGE TGSGKTTQIP QWAVEFMKQQ
     QQGQPPGQAR LVACTQPRRV AAMSVATRVA EEMDVVLGQE VGYSIRFEDC ISERTVLKYC
     TDGMLLREAM NSPLLDKYKV LILDEAHERT LATDILMGLI KEIVRNRADI KVVIMSATLD
     AGKFQRYFED CPLLSVPGRT FPVEIFFTPN AEKDYLEAAI RTVIQIHMVE EVEGDILLFL
     TGQEEIEEAC KRIDREIQAL GADAGALSCI PLYSTLPPAA QQRIFEPAPP NRPNGAISRK
     CVISTNIAET SLTIDGVVFV IDPGFSKQKV YNPRIRVESL LVCPISKASA MQRAGRAGRT
     KPGKCFRLYT ETAYGSEMQD QTYPEILRSN LGSVVLQLKK LGTEDLVHFD FMDPPAPETL
     MRALELLNYL QAINDDGELT ELGSLMAEFP LDPQLAKMLI TSTELNCSNE ILSITAMLSV
     PQCWVRPNEM RTEADEAKAR FAHIDGDHLT LLNVYHSFKQ NQEDPQWCYD NFINYRTMKT
     ADTVRTQLSR VMDKYNLRRV STDFKSRDYY LNIRKALVAG FFMQVAHLER SGHYVTVKDN
     QLVNLHPSTV LDHKPEWALY NEFVLTTKNF IRTVTDVRPE WLLQIAPQYY DLDNFPDGDT
     KRKLTTVMQT LQRNAGRGY
//

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