(data stored in ACNUC404 zone)

HOGENOM: DANRE10_10_PE18

ID   DANRE10_10_PE18                      STANDARD;      PRT;   375 AA.
AC   DANRE10_10_PE18; Q6BDC4;
DT   00-JAN-0000 (Rel. 1, Created)
DT   00-JAN-0000 (Rel. 2, Last sequence update)
DT   00-JAN-0000 (Rel. 3, Last annotation update)
DE   SubName: Full=LIM homeobox 6;SubName: Full=Lhx6;SubName:
DE   Full=Uncharacterized protein; (DANRE10_10.PE18).
GN   Name=lhx6; Synonyms=Dr.33994;
OS   DANIO RERIO.
OC   Eukaryota; Metazoa; Eumetazoa; Bilateria; Coelomata; Deuterostomia;
OC   Chordata; Craniata; Vertebrata; Gnathostomata; Teleostomi; Euteleostomi;
OC   Actinopterygii; Actinopteri; Neopterygii; Teleostei; Elopocephala;
OC   Clupeocephala; Otocephala; Ostariophysi; Otophysi; Cypriniphysi;
OC   Cypriniformes; Cyprinoidea; Cyprinidae; Danio.
OX   NCBI_TaxID=7955;
RN   [0]
RP   -.;
RG   -.;
RL   -.;
CC   -!- SEQ. DATA ORIGIN: Translated from the HOGENOM CDS DANRE10_10.PE18.
CC       Danio rerio chromosome 10 Zv9 partial sequence 8820539..9801566 annotat
CC       by Ensembl
CC   -!- ANNOTATIONS ORIGIN:Q6BDC4_DANRE
CC   -!- SUBCELLULAR LOCATION: Nucleus (By similarity).
CC   -!- SIMILARITY: Contains 1 homeobox DNA-binding domain.
CC   -!- SIMILARITY: Contains 2 LIM zinc-binding domains.
CC   -!- GENE_FAMILY: HOG000038965 [ FAMILY / ALN / TREE ]
DR   HOGENOM:Danio_rerio;ENSDARG00000006896;ENSDART00000021100;ENSDARP00000017657.
DR   EMBL; AY664403; - ;
DR   EMBL; BC162225; - ;
DR   UniProtKB/Swiss-Prot; Q6BDC4; -.
DR   EMBL; BX571668; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR   EMBL; BC162225; AAI62225.1; -; mRNA.
DR   EMBL; AY664403; AAT90495.1; -; mRNA.
DR   IPI; IPI00495496; -.
DR   RefSeq; NP_001004015.1; NM_001004015.1.
DR   UniGene; Dr.33994; -.
DR   ProteinModelPortal; Q6BDC4; -.
DR   STRING; Q6BDC4; -.
DR   Ensembl; ENSDART00000021100; ENSDARP00000017657; ENSDARG00000006896.
DR   GeneID; 445565; -.
DR   KEGG; dre:445565; -.
DR   CTD; 26468; -.
DR   ZFIN; ZDB-GENE-041025-1; lhx6.
DR   eggNOG; fiNOG13592; -.
DR   GeneTree; ENSGT00600000084154; -.
DR   InParanoid; Q6BDC4; -.
DR   OMA; YIDSHPF; -.
DR   OrthoDB; EOG4GTKD8; -.
DR   Bgee; Q6BDC4; -.
DR   GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR   GO; GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
DR   GO; GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.
DR   GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR   InterPro; IPR001356; Homeobox.
DR   InterPro; IPR017970; Homeobox_CS.
DR   InterPro; IPR009057; Homeodomain-like.
DR   InterPro; IPR012287; Homeodomain-rel.
DR   InterPro; IPR001781; Znf_LIM.
DR   Gene3D; G3DSA:1.10.10.60; Homeodomain-rel; 1.
DR   Gene3D; G3DSA:2.10.110.10; Znf_LIM; 2.
DR   Pfam; PF00046; Homeobox; 1.
DR   Pfam; PF00412; LIM; 2.
DR   SMART; SM00389; HOX; 1.
DR   SMART; SM00132; LIM; 2.
DR   SUPFAM; SSF46689; Homeodomain_like; 1.
DR   PROSITE; PS00027; HOMEOBOX_1; 1.
DR   PROSITE; PS50071; HOMEOBOX_2; 1.
DR   PROSITE; PS00478; LIM_DOMAIN_1; 2.
DR   PROSITE; PS50023; LIM_DOMAIN_2; 2.
DR   HOGENOMDNA; DANRE10_10.PE18; -.
KW   ENSDARG000000068965old_1320000031; ENSDARP000000176571old_1320000031;
KW   AY664403; BC162225;
KW   Complete proteome; DNA-binding; Homeobox; LIM domain; Metal-binding;
KW   Nucleus; Reference proteome; Repeat; Zinc.
SQ   SEQUENCE   375 AA;  UNKNOWN MW;  UNKNOWN CRC64;
     MYWKNEALAP LSEGNQFLSE GIPSKQVISP DSHSTPGASR CVDGQHGQAM SQSDGESHRS
     NMEKDDTRSS PSPPSTPSIC SPTSTASSVP STGKNVCASC GLEILDRYLL KVNNLIWHVR
     CLECSVCRTS LRQHSSCYIK NKEIFCKMDY FSRFGTKCAR CGRQIYASDW VRRARGNAYH
     LACFACFSCK RQLSTGEEFG LVEEKVLCRI HYDTMVENLK RAAESGSGLT LEGAVPSEQD
     SQPKPAKRAR TSFTAEQLQV MQAQFAQDNN PDAQTLQKLA DMTGLSRRVI QVWFQNCRAR
     HKKHTPQHNG PPQAHPQARM PPSLPDELHY SPFGSPERAR MVALHGYIDS HPFSVLTTQS
     LPHQAMTLPQ LPLSR
//

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