(data stored in SCRATCH3701 zone)

HOGENOM6: DEFDS_2_PE190

ID   DEFDS_2_PE190                        STANDARD;      PRT;   833 AA.
AC   DEFDS_2_PE190; D3PF27;
DT   00-JAN-0000 (Rel. 1, Created)
DT   00-JAN-0000 (Rel. 2, Last sequence update)
DT   00-JAN-0000 (Rel. 3, Last annotation update)
DE   SubName: Full=DNA topoisomerase II, A subunit; (DEFDS_2.PE190).
GN   OrderedLocusNames=DEFDS_P199;
OS   DEFERRIBACTER DESULFURICANS SSM1.
OC   Bacteria; Deferribacteres; Deferribacterales; Deferribacteraceae;
OC   Deferribacter.
OX   NCBI_TaxID=639282;
RN   [0]
RP   -.;
RG   -.;
RL   -.;
CC   -!- SEQ. DATA ORIGIN: Translated from the HOGENOM CDS DEFDS_2.PE190.
CC       Deferribacter desulfuricans SSM1 megaplasmid pDF308, complete sequence.
CC       1..112154 annotated by Ensembl
CC   -!- ANNOTATIONS ORIGIN:D3PF27_DEFDS
CC   -!- GENE_FAMILY: HOG000076278 [ FAMILY / ALN / TREE ]
DR   UniProtKB/Swiss-Prot; D3PF27; -.
DR   EMBL; AP011530; BAI81819.1; -; Genomic_DNA.
DR   RefSeq; YP_003497575.1; NC_013940.1.
DR   GeneID; 8868892; -.
DR   GenomeReviews; AP011530_GR; DEFDS_P199.
DR   KEGG; ddf:DEFDS_P199; -.
DR   GO; GO:0005694; C:chromosome; IEA:InterPro.
DR   GO; GO:0005524; F:ATP binding; IEA:InterPro.
DR   GO; GO:0003918; F:DNA topoisomerase (ATP-hydrolyzing) activity; IEA:InterPro.
DR   GO; GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.
DR   GO; GO:0006265; P:DNA topological change; IEA:InterPro.
DR   InterPro; IPR020899; Arg_repress_C.
DR   InterPro; IPR006691; GyrA/parC_pinwhl.
DR   InterPro; IPR002205; Topo_IIA_A/C.
DR   InterPro; IPR013758; Topo_IIA_A/C_ab.
DR   InterPro; IPR013757; Topo_IIA_A_a.
DR   InterPro; IPR013760; Topo_IIA_cen.
DR   Gene3D; G3DSA:3.30.1360.40; Arg_repress; 1.
DR   Gene3D; G3DSA:3.90.199.10; Topo_IIA_A/C_ab; 1.
DR   Gene3D; G3DSA:1.10.268.10; Topo_IIA_A_a; 1.
DR   Pfam; PF03989; DNA_gyraseA_C; 5.
DR   Pfam; PF00521; DNA_topoisoIV; 1.
DR   SMART; SM00434; TOP4c; 1.
DR   SUPFAM; SSF56719; Topo_IIA_cen; 1.
DR   HOGENOMDNA; DEFDS_2.PE190; -.
DR   PRODOM; DEFDS_2_PE190.
DR   SWISS-2DPAGE; DEFDS_2_PE190.
KW   DNA topoisomerase II, A subunit;
KW   Complete proteome; DNA-binding; Isomerase; Plasmid; Topoisomerase.
SQ   SEQUENCE   833 AA;  UNKNOWN MW;  UNKNOWN CRC64;
     MIERKSKTIK NDIVDIMKHN YIDYAMSVII GRSLPDIRDG LKPVQRRILY DMYHDLHNTH
     EKPYKKSARI VGDVIGKYHP HGDAAVYDTI VRMAQDFVFR YPLIDGQGNF GSIDGDSPAA
     MRYTEIRMTK IAEEMLKDID KDTVDFIPNY DGSLKEPTVL PTKLPNLLIN GTNGIAVGMA
     TNIPPHNLKE VIKACLYLLK NERSKSYLKE FYETNSVKVS DDIINQIHNK IMTILKAPDF
     PTGGIIINSK DIPKIYRNGT GSIKIKAKIE VNKDQIIITE LPYMVNKSDL IIKIADLSKS
     NKIQGIADIK DESTKDIRIV IKLRKKTDPN IVLNQLYKYT QLTTTFSCNF VGIYKNKPYQ
     LNILDLLFNF LSFRLDIINR RTQFLLRKNQ NKLHKLKGLK IAVENIDNFV KIIKTAKNTT
     DATQKLMKKY KLDDIQVNEI LNMRLQRLTS LEIEKLLNEY QETKENIQTY KEILNSYDKQ
     IELIINELHD LQKNYCKNDK RLTKLEDEDI SFDIKNLIPD NPVIIIYTDD GFIKKENISK
     VTKTGKTTNL QKNDSAKFII NTTNHKKLLL FTDTGKLYYL NVYDIPETGS GNSKGTHISN
     LIKLNTNDKI VLIRTQIHEN EYSNYDMVCI TEKGLVKRTS LEEYKNSKNG SLVLKLNSDD
     KLLKVFFINK QEENYLLMLS KQSKYIIFNI NQVRTVARLA KGVVGMLLNN ENDKIVDCAI
     ITKPMLENPN EYLLCTITNK GFIKLTPLEE YSVQNRKTKG SYVMKVTNKT GEPILVQILA
     KNSKTNNCIL ITNTGQLIKI DINNISVTNR VSTGQPIEYK LEHNNYIVSA TFL
//

If you have problems or comments...

PBIL Back to PBIL home page