(data stored in ACNUC7421 zone)

HOGENOM: ECOBR_1_PE1299

ID   ECOBR_1_PE1299                       STANDARD;      PRT;   457 AA.
AC   ECOBR_1_PE1299; C6UGZ0;
DT   00-JAN-0000 (Rel. 1, Created)
DT   00-JAN-0000 (Rel. 2, Last sequence update)
DT   00-JAN-0000 (Rel. 3, Last annotation update)
DE   SubName: Full=ATP-dependent RNA helicase, specific for 23S rRNA;
DE   (ECOBR_1.PE1299).
GN   Name=dbpA; OrderedLocusNames=ECB_01320;
OS   ESCHERICHIA COLI B STR. REL606.
OC   Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales;
OC   Enterobacteriaceae; Escherichia.
OX   NCBI_TaxID=413997;
RN   [0]
RP   -.;
RG   -.;
RL   -.;
CC   -!- SEQ. DATA ORIGIN: Translated from the HOGENOM CDS ECOBR_1.PE1299.
CC       Escherichia coli B str. REL606 chromosome, complete genome.
CC       complete sequence.
CC   -!- ANNOTATIONS ORIGIN:C6UGZ0_ECOBR
CC   -!- SIMILARITY: Belongs to the DEAD box helicase family.
CC   -!- GENE_FAMILY: HOG000268809 [ FAMILY / ALN / TREE ]
DR   UniProtKB/Swiss-Prot; C6UGZ0; -.
DR   EMBL; CP000819; ACT38994.1; -; Genomic_DNA.
DR   RefSeq; YP_003044530.1; NC_012967.1.
DR   ProteinModelPortal; C6UGZ0; -.
DR   SMR; C6UGZ0; 1-456.
DR   EnsemblBacteria; EBESCT00000161531; EBESCP00000152006; EBESCG00000163640.
DR   GeneID; 8176025; -.
DR   GenomeReviews; CP000819_GR; ECB_01320.
DR   KEGG; ebr:ECB_01320; -.
DR   GeneTree; EBGT00050000008320; -.
DR   ProtClustDB; PRK11776; -.
DR   GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR   GO; GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.
DR   GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR   InterPro; IPR005580; DbpA_RNA-bd.
DR   InterPro; IPR014001; DEAD-like_helicase.
DR   InterPro; IPR011545; DNA/RNA_helicase_DEAD/DEAH_N.
DR   InterPro; IPR001650; Helicase_C.
DR   InterPro; IPR000629; RNA-helicase_DEAD-box_CS.
DR   InterPro; IPR014014; RNA_helicase_DEAD_Q_motif.
DR   Pfam; PF03880; DbpA; 1.
DR   Pfam; PF00270; DEAD; 1.
DR   Pfam; PF00271; Helicase_C; 1.
DR   SMART; SM00487; DEXDc; 1.
DR   SMART; SM00490; HELICc; 1.
DR   PROSITE; PS00039; DEAD_ATP_HELICASE; 1.
DR   PROSITE; PS51192; HELICASE_ATP_BIND_1; 1.
DR   PROSITE; PS51194; HELICASE_CTER; 1.
DR   PROSITE; PS51195; Q_MOTIF; 1.
DR   HOGENOMDNA; ECOBR_1.PE1299; -.
KW   ATP-dependent RNA helicase DbpA;
KW   ATP-binding; Complete proteome; Helicase; Hydrolase;
KW   Nucleotide-binding.
SQ   SEQUENCE   457 AA;  UNKNOWN MW;  UNKNOWN CRC64;
     MTAFSTLNVL PPAQLTNLNE LGYLTMTPVQ AAALPAILAG KDVRVQAKTG SGKTAAFGLG
     LLQQIDASLF QTQALVLCPT RELADQVAGE LRRLARFLPN TKILTLCGGQ PFGMQRDSLQ
     HAPHIIVATP GRLLDHLQKG TVSLDALNTL VMDEADRMLD MGFSDAIDDV IRFAPASRQT
     LLFSATWPEA IAAISGRVQR DPLAIEIDST DALPPIEQQF YETSSKGKIP LLQRLLSLHQ
     PSSCVVFCNT KKDCQAVCDA LNEVGQSALS LHGDLEQRDR DQTLVRFANG SARVLVATDV
     AARGLDIKSL ELVVNFELAW DPEVHVHRIG RTARAGNSGL AISFCAPEEA QRANIISDML
     QIKLNWQTPP ANSSIATLEA EMATLCIDGG KKAKMRPGDV LGALTGDIGL DGADIGKIAV
     HPAHVYVAVR QAVAHKAWKQ LQGGKIKGKT CRVRLLK
//

If you have problems or comments...

PBIL Back to PBIL home page