(data stored in ACNUC7421 zone)

HOGENOM: ECOL5_1_PE1364

ID   ECOL5_1_PE1364                       STANDARD;      PRT;   457 AA.
AC   ECOL5_1_PE1364; Q0TI23;
DT   00-JAN-0000 (Rel. 1, Created)
DT   00-JAN-0000 (Rel. 2, Last sequence update)
DT   00-JAN-0000 (Rel. 3, Last annotation update)
DE   SubName: Full=ATP-independent RNA helicase DbpA; (ECOL5_1.PE1364).
GN   OrderedLocusNames=ECP_1397;
OS   ESCHERICHIA COLI 536.
OC   Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales;
OC   Enterobacteriaceae; Escherichia.
OX   NCBI_TaxID=362663;
RN   [0]
RP   -.;
RG   -.;
RL   -.;
CC   -!- SEQ. DATA ORIGIN: Translated from the HOGENOM CDS ECOL5_1.PE1364.
CC       Escherichia coli 536, complete genome.
CC       sequence.
CC   -!- ANNOTATIONS ORIGIN:Q0TI23_ECOL5
CC   -!- SIMILARITY: Belongs to the DEAD box helicase family.
CC   -!- GENE_FAMILY: HOG000268809 [ FAMILY / ALN / TREE ]
DR   UniProtKB/Swiss-Prot; Q0TI23; -.
DR   EMBL; CP000247; ABG69406.1; -; Genomic_DNA.
DR   RefSeq; YP_669307.1; NC_008253.1.
DR   ProteinModelPortal; Q0TI23; -.
DR   EnsemblBacteria; EBESCT00000049587; EBESCP00000047776; EBESCG00000048635.
DR   GeneID; 4187574; -.
DR   GenomeReviews; CP000247_GR; ECP_1397.
DR   KEGG; ecp:ECP_1397; -.
DR   eggNOG; COG0513; -.
DR   GeneTree; EBGT00050000008320; -.
DR   OMA; KAREDDI; -.
DR   PhylomeDB; Q0TI23; -.
DR   ProtClustDB; PRK11776; -.
DR   GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR   GO; GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.
DR   GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR   InterPro; IPR005580; DbpA_RNA-bd.
DR   InterPro; IPR014001; DEAD-like_helicase.
DR   InterPro; IPR011545; DNA/RNA_helicase_DEAD/DEAH_N.
DR   InterPro; IPR001650; Helicase_C.
DR   InterPro; IPR000629; RNA-helicase_DEAD-box_CS.
DR   InterPro; IPR014014; RNA_helicase_DEAD_Q_motif.
DR   Pfam; PF03880; DbpA; 1.
DR   Pfam; PF00270; DEAD; 1.
DR   Pfam; PF00271; Helicase_C; 1.
DR   SMART; SM00487; DEXDc; 1.
DR   SMART; SM00490; HELICc; 1.
DR   PROSITE; PS00039; DEAD_ATP_HELICASE; 1.
DR   PROSITE; PS51192; HELICASE_ATP_BIND_1; 1.
DR   PROSITE; PS51194; HELICASE_CTER; 1.
DR   PROSITE; PS51195; Q_MOTIF; 1.
DR   HOGENOMDNA; ECOL5_1.PE1364; -.
KW   ATP-dependent RNA helicase DbpA;
KW   ATP-binding; Complete proteome; Helicase; Hydrolase;
KW   Nucleotide-binding.
SQ   SEQUENCE   457 AA;  UNKNOWN MW;  UNKNOWN CRC64;
     MTAFSTLNVL SSAQLTNLNE LGYLTMTPVQ AAALPAILAG KDVRVQAKTG SGKTAAFGLG
     LLQQIDASLF QTQALVLCPT RELADQVAGE LRRLARFLPN TKILTLCGGQ PFGMQRDSLQ
     HAPHIIVATP GRLLDHLQKG TVSLDALNTL VMDEADRMLD MGFSDAIDDV ICFAPASRQT
     LLFSATWPEA IAAISGRVQR DPLAIEIDST DALPPIEQQF YETSSKGKIP LLQRLLSLHQ
     PSSCVVFCNT KKDCQSVCDA LNEVGQSALS LHGDLEQRDR DQTLVRFANG SARVLVATDV
     AARGLDIKSL ELVVNFELAW DPEVHVHRIG RTARAGNSGL AISFCAPEEA QRANIISDML
     QIKLNWQTLP ANSSIVPLKA EMATLCIDGG KKAKMRPGDV LGALTGDIGL DGADIGKIAV
     HPAHVYVAVR QAVAHKAWKQ LQGGKIKGKT CRVRLLK
//

If you have problems or comments...

PBIL Back to PBIL home page