(data stored in SCRATCH zone)

HOGENOM: FLAJ1_1_PE1012

ID   FLAJ1_1_PE1012                       STANDARD;      PRT;   726 AA.
AC   FLAJ1_1_PE1012; A5FL71;
DT   00-JAN-0000 (Rel. 1, Created)
DT   00-JAN-0000 (Rel. 2, Last sequence update)
DT   00-JAN-0000 (Rel. 3, Last annotation update)
DE   SubName: Full=Ribonuclease R; EC=3.1.13 1; (FLAJ1_1.PE1012).
GN   OrderedLocusNames=Fjoh_1017;
OS   FLAVOBACTERIUM JOHNSONIAE UW101.
OC   Bacteria; Bacteroidetes; Flavobacteria; Flavobacteriales;
OC   Flavobacteriaceae; Flavobacterium.
OX   NCBI_TaxID=376686;
RN   [0]
RP   -.;
RG   -.;
RL   -.;
CC   -!- SEQ. DATA ORIGIN: Translated from the HOGENOM CDS FLAJ1_1.PE1012.
CC       Flavobacterium johnsoniae UW101, complete genome.
CC       annotated by Ensembl
CC   -!- ANNOTATIONS ORIGIN:A5FL71_FLAJ1
CC   -!- CATALYTIC ACTIVITY: Exonucleolytic cleavage in the 3'- to 5'-
CC       direction to yield nucleoside 5'-phosphates.
CC   -!- SIMILARITY: Belongs to the RNR ribonuclease family.
CC   -!- SIMILARITY: Contains 1 S1 motif domain.
CC   -!- GENE_FAMILY: HOG000071119 [ FAMILY / ALN / TREE ]
DR   UniProtKB/Swiss-Prot; A5FL71; -.
DR   EMBL; CP000685; ABQ04050.1; -; Genomic_DNA.
DR   RefSeq; YP_001193369.1; NC_009441.1.
DR   ProteinModelPortal; A5FL71; -.
DR   STRING; A5FL71; -.
DR   GeneID; 5090608; -.
DR   GenomeReviews; CP000685_GR; Fjoh_1017.
DR   KEGG; fjo:Fjoh_1017; -.
DR   eggNOG; COG0557; -.
DR   OMA; FGFLIPD; -.
DR   ProtClustDB; CLSK2533823; -.
DR   GO; GO:0008859; F:exoribonuclease II activity; IEA:EC.
DR   GO; GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
DR   GO; GO:0016070; P:RNA metabolic process; IEA:InterPro.
DR   InterPro; IPR011129; Cold_shock_prot.
DR   InterPro; IPR012340; NA-bd_OB-fold.
DR   InterPro; IPR016027; NA-bd_OB-fold-like.
DR   InterPro; IPR003029; Rbsml_prot_S1_RNA-bd_dom.
DR   InterPro; IPR022967; RNA-binding_domain_S1.
DR   InterPro; IPR013223; RNase_B_OB_dom.
DR   InterPro; IPR001900; RNase_II/R.
DR   InterPro; IPR022966; RNase_II/R_CS.
DR   InterPro; IPR004476; RNase_II/RNase_R_bac.
DR   InterPro; IPR011805; RNase_R_bac.
DR   Gene3D; G3DSA:2.40.50.140; OB_NA_bd_sub; 1.
DR   PANTHER; PTHR23355:SF9; RNase_II_R_bac; 1.
DR   Pfam; PF08206; OB_RNB; 2.
DR   Pfam; PF00773; RNB; 1.
DR   Pfam; PF00575; S1; 1.
DR   SMART; SM00357; CSP; 2.
DR   SMART; SM00955; RNB; 1.
DR   SMART; SM00316; S1; 1.
DR   SUPFAM; SSF50249; Nucleic_acid_OB; 1.
DR   TIGRFAMs; TIGR00358; 3_prime_RNase; 1.
DR   TIGRFAMs; TIGR02063; RNase_R; 1.
DR   PROSITE; PS01175; RIBONUCLEASE_II; 1.
DR   PROSITE; PS50126; S1; 1.
DR   HOGENOMDNA; FLAJ1_1.PE1012; -.
KW   ribonuclease R;
KW   Complete proteome; Cytoplasm; Exonuclease; Hydrolase; Nuclease;
KW   RNA-binding.
SQ   SEQUENCE   726 AA;  UNKNOWN MW;  UNKNOWN CRC64;
     MSKKIRKPIK KEKDFSGKIL KILSQNANKP FNYRQIGAKL ELDDTKSRNQ IIKDLKILAA
     QKKIIETEPG KYLVKAVSQD YYEGTIDMTS RKTAYFICDE FEEDVFIPTN NLNRALDKDK
     VKVYVYNRRK GKRPEGEVIE VIERDKTEFV GVIDIQPNFA FVSTANPKMY TDIFIPKDKL
     GEAENGDVVL VKIEDWPKRA DSPFGSVIRV LGKPGEHNTE IHAILAEYGL PSDFPVEVEV
     YAQKLDTSIQ ESEIAKRRDM RDTLTFTIDP KDAKDFDDAL SFKKLENGNF EIGIHIADVS
     YYLEEGTILD DEAYQRATSV YLVDRVVPML PEVLSNFACS LRPNEEKYTF SAIFEVSPTA
     QVINQWFGRT VIYSDQRFAY EEAQYIIETK DNTIPVDVSI TGESYVVSDE IREATLKLDE
     LAKILRKKRM QQGAISFDKV EVKFNLDAEG EPEGVYFKIS KDANHLIEEF MLLANRKVAE
     YIGKQKKTFV YRIHDEPNED KLIAMQTVIA KFGYKIDFRN KGDIAKSLNS LMEEVNGKKE
     QNLIDTLAIR SMSKAKYSTD NIGHYGLAFD YYSHFTSPIR RYPDVMVHRL LQYYLDGGAS
     VDEETYETKC LHCSNMESLA TNAERDSIKY MQVKYMQDHQ DEEFLGVISG VTEWGIYVEI
     VSNKCEGMVR IREIKDDYYT FDERQYALVG ATSNSILQLG DEIYVKVKNA DLVKKQLDFH
     FLRRAE
//

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