(data stored in ACNUC7421 zone)

HOGENOM: FRATN_1_PE1015

ID   FRATN_1_PE1015                       STANDARD;      PRT;   1141 AA.
AC   FRATN_1_PE1015; A0Q6R1;
DT   00-JAN-0000 (Rel. 1, Created)
DT   00-JAN-0000 (Rel. 2, Last sequence update)
DT   00-JAN-0000 (Rel. 3, Last annotation update)
DE   SubName: Full=Transcription-repair coupling factor; (FRATN_1.PE1015).
GN   Name=mfd; OrderedLocusNames=FTN_1039;
OS   FRANCISELLA NOVICIDA U112.
OC   Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales;
OC   Francisellaceae; Francisella.
OX   NCBI_TaxID=401614;
RN   [0]
RP   -.;
RG   -.;
RL   -.;
CC   -!- SEQ. DATA ORIGIN: Translated from the HOGENOM CDS FRATN_1.PE1015.
CC       Francisella tularensis subsp. novicida U112, complete genome.
CC       genome.
CC   -!- ANNOTATIONS ORIGIN:A0Q6R1_FRATN
CC   -!- GENE_FAMILY: HOG000216592 [ FAMILY / ALN / TREE ]
DR   UniProtKB/Swiss-Prot; A0Q6R1; -.
DR   EMBL; CP000439; ABK89926.1; -; Genomic_DNA.
DR   RefSeq; YP_898680.1; NC_008601.1.
DR   ProteinModelPortal; A0Q6R1; -.
DR   STRING; A0Q6R1; -.
DR   GeneID; 4547971; -.
DR   GenomeReviews; CP000439_GR; FTN_1039.
DR   KEGG; ftn:FTN_1039; -.
DR   eggNOG; COG1197; -.
DR   OMA; SHDLDIR; -.
DR   ProtClustDB; CLSK934611; -.
DR   GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR   GO; GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.
DR   GO; GO:0003684; F:damaged DNA binding; IEA:InterPro.
DR   GO; GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.
DR   GO; GO:0006281; P:DNA repair; IEA:InterPro.
DR   InterPro; IPR003711; CarD_TRCF.
DR   InterPro; IPR014001; DEAD-like_helicase.
DR   InterPro; IPR011545; DNA/RNA_helicase_DEAD/DEAH_N.
DR   InterPro; IPR001650; Helicase_C.
DR   InterPro; IPR004576; Mfd.
DR   InterPro; IPR005118; Tscpt_repair-coupling_fac_dom.
DR   Pfam; PF02559; CarD_TRCF; 1.
DR   Pfam; PF00270; DEAD; 1.
DR   Pfam; PF00271; Helicase_C; 1.
DR   Pfam; PF03461; TRCF; 1.
DR   SMART; SM00487; DEXDc; 1.
DR   SMART; SM00490; HELICc; 1.
DR   TIGRFAMs; TIGR00580; Mfd; 1.
DR   PROSITE; PS51192; HELICASE_ATP_BIND_1; 1.
DR   PROSITE; PS51194; HELICASE_CTER; 1.
DR   HOGENOMDNA; FRATN_1.PE1015; -.
KW   transcription-repair coupling factor;
KW   ATP-binding; Complete proteome; Helicase; Hydrolase;
KW   Nucleotide-binding.
SQ   SEQUENCE   1141 AA;  UNKNOWN MW;  UNKNOWN CRC64;
     MLNNQISAND TVVSNAYGSA FSILFNEYLK QNNQFNLIVT EDSQQAHKIY KELKYLNKNN
     SKVDILFFPN LEILPYDRFS ASIDIISRRQ EILYKMTHQP QNTLIITSIS NTLRKIAPAS
     FIQEHSFILK TGDNLDITKY KMLLTEAGYT LVNNVFEKGE FSIRGSIIDI YPIGSKVAFR
     IDLFDNEIDS IKELNTESQR SGNQIQSINI MPSHELVYNN QNTTFALDKL NKLCGDKALN
     STIATYIQNN EYFSGIEFYL PLFYDKLSSL YDYLPPSTNI HLVDNITNSI EAFSDEVKFR
     YNELKHDSDR PILPFQEIFY SQQEIQDIYQ QYKNIKWFQQ PKSKSKILKV DHLEKISANY
     KLANPFKDLQ QFIDKSNFDK VIFSTDSNGR AELLLEHLNK LNLNIQSCKN FNEAIEASTK
     FCLIISPFQE GMIIDKKIAL ITEADLFPEH SYNSTKVSQH DHHPTVDLKD LTDLKPGMHV
     VHIDHGIGRY EGLESIELNG KKDEFILLRY ANDAKIYVPI TSLNLISIYN SSLTEKIALN
     KLGTDKWKKQ KEKTIKKIID VAANLLEIYA KREMRQGFSN SLDEEEYLRF CADFPYEETP
     DQLSAINDVF KDMISAKPMD RLICGDVGFG KTEIAMRAAF LATQNQKQVA ILVPTTILAQ
     QHYNSFKDRF TNTAVNIEVI TRSKTPKAQQ QLFEDLKKGT VDIIIGTHKL ISSKIDFKNL
     GLLIIDEEHR FGVAQKEKLK SLKAEIDILT MSATPIPRSL SMAFSALRDL SIIASPPAKR
     LSVKTFVKEY DNNIIREAVS RETIRGGQIF YLYNKVETIQ KKKEILQELF PRLRIAIAHG
     QMSEKEIQKV MFDFKHNKYH ILLCTTIIET GIDIPNANTL IIEDANNLGL AQLHQLRGRV
     GRSHHQAYAY MLIPNEASIT KDALKRLEAI SNTESLGGGF TLANHDLEIR GAGEILGEEQ
     SGNIDGIGLN LYMDLLDKTI ANLRAGKELN IEEVINSTVC EVELNIPTLI PDYYIYDVNT
     RLNIYKRISK ASHQDLVNIK IELIDRFGKL PLEVLYLLKV AHIKIDAIAL GISQIKMFAT
     SGKISFSNNT KFELQKLIKL IQSQHSDFRL TKEHDLIITK VTKTAEQRIE FIENFLKKIV
     Q
//

If you have problems or comments...

PBIL Back to PBIL home page