(data stored in ACNUC11299 zone)

HOGENOM: LEMAJ1_31_PE271

ID   LEMAJ1_31_PE271                      STANDARD;      PRT;   1662 AA.
AC   LEMAJ1_31_PE271; Q4Q600;
DT   00-JAN-0000 (Rel. 1, Created)
DT   00-JAN-0000 (Rel. 2, Last sequence update)
DT   00-JAN-0000 (Rel. 3, Last annotation update)
DE   RecName: Full=DNA-directed RNA polymerase; EC=2.7.7 6; (LEMAJ1_31.PE271).
GN   Name=RPOIILS; ORFNames=LMJF_31_2610;
OS   LEISHMANIA MAJOR STRAIN FRIEDLIN.
OC   Eukaryota; Euglenozoa; Kinetoplastida; Trypanosomatidae; Leishmania.
OX   NCBI_TaxID=347515;
RN   [0]
RP   -.;
RG   -.;
RL   -.;
CC   -!- SEQ. DATA ORIGIN: Translated from the HOGENOM CDS LEMAJ1_31.PE271.
CC       Leishmania major strain Friedlin complete genome, chromosome 31
CC       chromosome II, complete sequence.
CC   -!- ANNOTATIONS ORIGIN:Q4Q600_LEIMA
CC   -!- CATALYTIC ACTIVITY: Nucleoside triphosphate + RNA(n) = diphosphate
CC       + RNA(n+1).
CC   -!- SIMILARITY: Belongs to the RNA polymerase beta' chain family.
CC   -!- GENE_FAMILY: HOG000222975 [ FAMILY / ALN / TREE ]
DR   HOGENOM:Leishmania_major_strain_friedl;RPOIILS;CAJ08467.1.
DR   UniProtKB/Swiss-Prot; Q4Q600; -.
DR   EMBL; FR796427; CAJ08467.1; -; Genomic_DNA.
DR   RefSeq; XP_001685248.1; XM_001685196.1.
DR   ProteinModelPortal; Q4Q600; -.
DR   GeneID; 5654193; -.
DR   GenomeReviews; FR796427_GR; RPOIILS.
DR   KEGG; lma:LmjF31.2610; -.
DR   EuPathDB; EupathDB:LmjF.31.2610; -.
DR   OMA; SPTSPHY; -.
DR   PhylomeDB; Q4Q600; -.
DR   ProtClustDB; CLSZ2441388; -.
DR   GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR   GO; GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
DR   InterPro; IPR000722; RNA_pol_asu.
DR   InterPro; IPR006592; RNA_pol_N.
DR   InterPro; IPR007080; RNA_pol_Rpb1_1.
DR   InterPro; IPR007066; RNA_pol_Rpb1_3.
DR   InterPro; IPR007083; RNA_pol_Rpb1_4.
DR   InterPro; IPR007081; RNA_pol_Rpb1_5.
DR   InterPro; IPR007075; RNA_pol_Rpb1_6.
DR   InterPro; IPR007073; RNA_pol_Rpb1_7.
DR   Pfam; PF04997; RNA_pol_Rpb1_1; 1.
DR   Pfam; PF00623; RNA_pol_Rpb1_2; 1.
DR   Pfam; PF04983; RNA_pol_Rpb1_3; 1.
DR   Pfam; PF05000; RNA_pol_Rpb1_4; 1.
DR   Pfam; PF04998; RNA_pol_Rpb1_5; 1.
DR   Pfam; PF04992; RNA_pol_Rpb1_6; 1.
DR   Pfam; PF04990; RNA_pol_Rpb1_7; 1.
DR   SMART; SM00663; RPOLA_N; 1.
DR   HOGENOMDNA; LEMAJ1_31.PE271; -.
KW   RPOIILS5.1000047545old_1320000031; CAJ08467.1000044101old_1320000031;
KW   RNA polymerase ii largest subunit;
KW   Complete proteome; DNA-directed RNA polymerase;
KW   Nucleotidyltransferase; Reference proteome; Transcription;
KW   Transferase.
SQ   SEQUENCE   1662 AA;  UNKNOWN MW;  UNKNOWN CRC64;
     MSGGAPLPPS QMPLQKVHEV QFEVFKEAQI KAYAKCIIEH AKSYEHGQPV RGGINDLRMG
     TTDFEYSCET CGLRHPECPG HFGYVELAEP IFNINVFDVV LIALKCVCKY CGALLMDTND
     PSEMKKIAHL QGLNRLRMVA KLCGSVCKRS KDIQGCEGKG RQPRIGRFVG IYPGLQIKVT
     QEEQDYVWHA ENARQVLDRV SDSDALIMGF DRRFCHPRDL ILTVLPIPPP QVRPAVTFGS
     AKSDDELTHQ IMSIVKRNIQ LRKDKESGVK AAVDRSRALL QEHVATFFNN ASTYYKPAKV
     GDTKKLKSLT ERLKGKYGRL RGNLMGKRVD FSARTVITGD PNIDVDEVGV PFSVAMTLTF
     PERVNVINKK RLTEFVQRTT YPSANYIIRP NGNVTKLALV KDRSAVHLDV GDVVERHVID
     GDVVLFNRQP TLHRMSMMGH RVRVLNYNTF RLNLSCTTPY NADFDGDEMN LHVPQSLLTK
     AELIEMMMVP KNFVSPNKSA PCMGIVQDSL LGSYRLTDKD TFVDKYFIQS VALWLDLWEL
     PIPAILKPRP LWTGKQIFSL ILPEVNHPAS PYDKPPFPHN DKKIMIQRGQ LLVGAITKGV
     VGAAPGSLIH VIFNERGSDE VAKFINGVQR ITTYFNYCFA FSVGVQDTVA DATTLKEMNN
     VLHKTRQSVE KIGAAANNGK LTRKAGMSLL QSFEADVNSA LNKCREEAAK KALSNVRRTN
     SFKVMIEAGS KGSDLNICQI AVFVGQQNVA GSRIPFGFRR RTLPHFMLDD YGETSRGMAT
     RGYVEGLQPH EFYFHTMAGR EGLIDTAVKT SDTGYLQRKL VKALEDVHAS YDGTVRNANQ
     ELIQLAYGED GLDGARIEGN QAFPIPHMTN SEMADKYRYE YNDEGSFSEN MGGHYMDPFV
     RDSLLRDPQS VLKLQEEFEQ LMRDRAMSRL VIDMEDKNKL KMNLPVNVAR LIQNARTTMG
     KRSQVSNLNP ITVINRVREL QEDLVQLFPS YHKDYNGRFV NVLSQQRVER ALTLFGIHLR
     QILGSKRVLK EYKLNDKAFE YLLKEIRTKY QQSLITPGEI IGAIAAQSCG EPATQMTLNT
     FHNAGISSKN VTLGVPRLLE LLNVSRNQRN ASVAVCLIRE YQKRNKAQEA QQFIEYCTLA
     NITTTVQIIY DPDPRNTVVA EDEEMIRWEQ AVMNAEDEEP DAEQPPSPFI ARLILDNDLF
     NDKRLNMKDV KSAIRQVDDT YMVQANMEND GQRIVRLRPR KCTGADSVPA LTKAVAQLLQ
     SVHLRGIPGI KKTLLKEGNT FRVDPEAGGI KNESSWMVDT EGTALQRIFV GVVNSEGKNI
     IDFSKTSSNK IPEVVTVLGI EAARRKLLSE LREAYLAYGL NINYRHYTIL VDTMCQRGYL
     MAVSRTGINR SETSGPLMRC SFEETVKVLM TAAAFGEKDP VRGVSASLVL GNQARIGTGL
     FDLLLDMSKL QHVVPLDKAT EARTSNVYHT DASVAPGSST LQGSHGELPP STVHENSSLA
     AGASSVYPRH ERAGMYGGIP IEASEVQFSS ALPTVMRTAL AASNTTEYHS SHHLSGASTY
     LASSALPSAS ALDTELSSYH LQSVARSTAY GYAPMAASGM PMPGATQLSV GEGGSLPYPY
     EASNGERFGS LGGAASSRAS APYDPTQQPS QEFSQTEEQE EP
//

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