(data stored in ACNUC11299 zone)

HOGENOM: LEMEX1_29_PE265

ID   LEMEX1_29_PE265                      STANDARD;      PRT;   1662 AA.
AC   LEMEX1_29_PE265; E9B260;
DT   00-JAN-0000 (Rel. 1, Created)
DT   00-JAN-0000 (Rel. 2, Last sequence update)
DT   00-JAN-0000 (Rel. 3, Last annotation update)
DE   RecName: Full=DNA-directed RNA polymerase; EC=2.7.7 6; (LEMEX1_29.PE265).
GN   ORFNames=LMXM_30_2610;
OS   LEISHMANIA MEXICANA MHOM/GT/2001/U1103.
OC   Eukaryota; Euglenozoa; Kinetoplastida; Trypanosomatidae; Leishmania.
OX   NCBI_TaxID=929439;
RN   [0]
RP   -.;
RG   -.;
RL   -.;
CC   -!- SEQ. DATA ORIGIN: Translated from the HOGENOM CDS LEMEX1_29.PE265.
CC       Leishmania mexicana MHOM/GT/2001/U1103 complete genome, chromosome 30
CC       chromosome II, complete sequence.
CC   -!- ANNOTATIONS ORIGIN:E9B260_LEIME
CC   -!- CATALYTIC ACTIVITY: Nucleoside triphosphate + RNA(n) = diphosphate
CC       + RNA(n+1).
CC   -!- SIMILARITY: Belongs to the RNA polymerase beta' chain family.
CC   -!- GENE_FAMILY: HOG000222975 [ FAMILY / ALN / TREE ]
DR   UniProtKB/Swiss-Prot; E9B260; -.
DR   EMBL; FR799583; CBZ29319.1; -; Genomic_DNA.
DR   GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR   GO; GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
DR   InterPro; IPR000722; RNA_pol_asu.
DR   InterPro; IPR006592; RNA_pol_N.
DR   InterPro; IPR007080; RNA_pol_Rpb1_1.
DR   InterPro; IPR007066; RNA_pol_Rpb1_3.
DR   InterPro; IPR007083; RNA_pol_Rpb1_4.
DR   InterPro; IPR007081; RNA_pol_Rpb1_5.
DR   InterPro; IPR007075; RNA_pol_Rpb1_6.
DR   InterPro; IPR007073; RNA_pol_Rpb1_7.
DR   Pfam; PF04997; RNA_pol_Rpb1_1; 1.
DR   Pfam; PF00623; RNA_pol_Rpb1_2; 1.
DR   Pfam; PF04983; RNA_pol_Rpb1_3; 1.
DR   Pfam; PF05000; RNA_pol_Rpb1_4; 1.
DR   Pfam; PF04998; RNA_pol_Rpb1_5; 1.
DR   Pfam; PF04992; RNA_pol_Rpb1_6; 1.
DR   Pfam; PF04990; RNA_pol_Rpb1_7; 1.
DR   SMART; SM00663; RPOLA_N; 1.
DR   HOGENOMDNA; LEMEX1_29.PE265; -.
KW   CBZ29319.1 20047545old_1320000031;
KW   RNA polymerase ii largest subunit;
KW   DNA-directed RNA polymerase; Nucleotidyltransferase; Transcription;
KW   Transferase.
SQ   SEQUENCE   1662 AA;  UNKNOWN MW;  UNKNOWN CRC64;
     MSGGAPLPPS QMALQKVHEV QFEVFKEAQI KAYAKCIIEH AKSYEHGQPV RGGINDLRMG
     TTDFEYSCET CGLKHPECPG HFGYVELAEP IFNINVFDVV LIALKCVCKY CGALLMDTND
     PSEMKKIAHL QGLNRLRMVA KLCGSVCKRT KDIQGCEGKG RQPRIGRFVG IYPGLQIKVT
     QEEQDYVWHA ENARQVLDRV SDSDALIMGF DPRFCHPRDL ILTVLPIPPP QVRPAVAFGS
     AKSDDELTHQ IMSIVKRNIQ LRKDKESGVK AAVDRSRALL QEHVATFFNN ASTYYKPAKV
     GDTKKLKSLT ERLKGKYGRL RGNLMGKRVD FSARTVITGD PNIDVDEVGV PFSVAMTLTF
     PERVNVINRK RLTEFVQRTV YPSANYIIRP NGNVTKLALV KDRSAVHLDV GDVVERHVID
     GDVVLFNRQP TLHRMSMMGH RVRVLNYNTF RLNLSCTTPY NADFDGDEMN LHVPQSLLTK
     AELIEMMMVP KNFVSPNKSA PCMGIVQDSL LGSYRLTDKD TFVDKYFIQS VALWLDLWEL
     PIPAILKPRP LWTGKQIFSL ILPEVNHPAS PYDKPPFPHN DKKIMIQRGQ LLVGAITKGV
     VGAAPGSLIH VIFNERGSDE VAKFINGVQR ITTYFNYCFA FSVGVQDTVA DATTLKEMNN
     VLHKTRQSVE KIGAAANNGK LTRKAGMSLL QSFEADVNSA LNKCREEAAK KALSNVRRTN
     SFKVMIEAGS KGSDLNICQI AVFVGQQNVA GSRIPFGFRR RTLPHFMLDD YGETSRGMAT
     RGYVEGLQPH EFYFHTMAGR EGLIDTAVKT SDTGYLQRKL VKALEDVHAS YDGTVRNANQ
     ELIQLAYGED GLDGARIEGN QAFPIPHMTN SEMAEKYRYE YNDEGSFSEN MGGHYMDPFV
     RDSLLRDPQS VLKLQEEFDQ LMKDRAMSRL VIDMEDKNKL KMNLPVNVAR LIQNARTTMG
     KRSQVSNLNP ITVINRVREL QEDLVQLFPS YHKDYNGRFV NVLSQQRVAR ALTLFGIHLR
     QILGSKRVLK EYKLNDKAFE YLLKEIRTKY QQSLITPGEI IGAIAAQSCG EPATQMTLNT
     FHNAGISSKN VTLGVPRLLE LLNVSKNQRN ASVAVCLIRE YQKRNKAQEA QQFIEYCTLA
     NITTTVQIIY DPDPRNTVVA EDEEMIRWEQ AVMNEEDEEP DAEQPPSPFI ARLILDNDLF
     NDKRLNMKDV KSAVRQVDDT YMVQANMEND GQRIVRLRPR KCTGADSVPA LTKAVAQLLQ
     SVHLRGIPGI KKTLLKEGNT FRVDPETGGI KNESSWMVDT EGTALQRIFV GVVNSEGKNI
     IDFSKTSSNK IPEVVTVLGI EAARRKLLSE LREAYLAYGL NINYRHYTIL VDTMCQRGYL
     MAVSRTGINR SETSGPLMRC SFEETVKVLM TAAAFGEKDP VRGVSANLVL GNQARIGTGL
     FDLMLDMSKL QHVVPLDKAT EARTSNVYHT DASVAPGSST LQASHGELPP STVHENSSLA
     AGASSVYPRH ERAGMYGGIP IEASEVQFSS ALSTVMGTVL AASNTTDYHS SHHLSGASTY
     LASSALPSAS ALDTELSSYH LQSVARSTAY GYAPMAASGM RMLGSAQLSV GEGGSMPYPY
     EASNGERFGS LGGAASSRAS APYDPTQQPS QEFSPTEEQE EP
//

If you have problems or comments...

PBIL Back to PBIL home page