(data stored in ACNUC11299 zone)

HOGENOM: MAIZE_2_PE3963

ID   MAIZE_2_PE3963                       STANDARD;      PRT;   1850 AA.
AC   MAIZE_2_PE3963; Q71ET7;
DT   00-JAN-0000 (Rel. 1, Created)
DT   00-JAN-0000 (Rel. 2, Last sequence update)
DT   00-JAN-0000 (Rel. 3, Last annotation update)
DE   RecName: Full=DNA-directed RNA polymerase; EC=2.7.7 6;Flags: Fragment;
DE   (MAIZE_2.PE3963).
GN   Name=RPB1;
OS   ZEA MAYS.
OC   Eukaryota; Viridiplantae; Embryophyta; Tracheophyta; Spermatophyta;
OC   Magnoliophyta; Liliopsida; commelinids; Poales; Poaceae; Panicoideae;
OC   Andropogoneae; Zea.
OX   NCBI_TaxID=4577;
RN   [0]
RP   -.;
RG   -.;
RL   -.;
CC   -!- SEQ. DATA ORIGIN: Translated from the HOGENOM CDS MAIZE_2.PE3963.
CC       Zea mays chromosome 10 AGPv2 full sequence 1..150189435 annotated by
CC       Ensembl Genomes
CC   -!- ANNOTATIONS ORIGIN:Q71ET7_MAIZE
CC   -!- CATALYTIC ACTIVITY: Nucleoside triphosphate + RNA(n) = diphosphate
CC       + RNA(n+1).
CC   -!- SIMILARITY: Belongs to the RNA polymerase beta' chain family.
CC   -!- GENE_FAMILY: HOG000222975 [ FAMILY / ALN / TREE ]
DR   HOGENOM:Zea_mays;GRMZM2G044306;GRMZM2G044306_T01;GRMZM2G044306_P01.
DR   UniProtKB/Swiss-Prot; Q71ET7; -.
DR   EMBL; AF519538; AAQ08515.1; -; mRNA.
DR   UniGene; Zm.18044; -.
DR   ProteinModelPortal; Q71ET7; -.
DR   EnsemblPlants; GRMZM2G044306_T01; GRMZM2G044306_P01; GRMZM2G044306.
DR   Gramene; Q71ET7; -.
DR   GeneTree; EPGT00070000030166; -.
DR   GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR   GO; GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
DR   InterPro; IPR000722; RNA_pol_asu.
DR   InterPro; IPR006592; RNA_pol_N.
DR   InterPro; IPR007080; RNA_pol_Rpb1_1.
DR   InterPro; IPR007066; RNA_pol_Rpb1_3.
DR   InterPro; IPR007083; RNA_pol_Rpb1_4.
DR   InterPro; IPR007081; RNA_pol_Rpb1_5.
DR   InterPro; IPR007075; RNA_pol_Rpb1_6.
DR   Pfam; PF04997; RNA_pol_Rpb1_1; 1.
DR   Pfam; PF00623; RNA_pol_Rpb1_2; 1.
DR   Pfam; PF04983; RNA_pol_Rpb1_3; 1.
DR   Pfam; PF05000; RNA_pol_Rpb1_4; 1.
DR   Pfam; PF04998; RNA_pol_Rpb1_5; 1.
DR   Pfam; PF04992; RNA_pol_Rpb1_6; 1.
DR   SMART; SM00663; RPOLA_N; 1.
DR   HOGENOMDNA; MAIZE_2.PE3963; -.
KW   GRMZM2G044306002965old_1320000031; GRMZM2G044306_P0181old_1320000031;
KW   Q71ET7;
KW   DNA-directed RNA polymerase; Nucleotidyltransferase; Transcription;
KW   Transferase.
SQ   SEQUENCE   1850 AA;  UNKNOWN MW;  UNKNOWN CRC64;
     MDARFPYSPA EVAKVEFVQF GILSPDEIRQ MSVIQIEHAE TMERGKPKPG GLSDPRLGTI
     DRKIKCETCM AGMAECPGHF GHLELAKPMF HIGFIKTVLS IMRCVCFNCS KILADEDETK
     FKQALKIRNP KNRLKRIYDA CKSKKVCAGG DDLDVQEQDT DEPIKKRGGC GAQQPNITVD
     GMKMVAEFKA PKKKTDDQDQ LPEPVERKQI LSAERVLNVL KRISDEDCLL LGLNPKYARP
     DWMILQVLPV PPPPVRPSVM MDTSSRSEDD LTHQLAMIIR HNENLRRQER NGAPAHIITE
     FAQLLQFHIA TYFDNDLPGQ PRATQRSGRP IKSICSRLKA KEGRIRGNLM GKRVDFSART
     VITPDPNINI DELGVPWSIA LNLTYPETVT PYNIERLKEL VEYGPHPPPG KTGAKYIIRE
     DGQRLDLRYV KKSSDQHLEL GYKVERHLND GDFVLFNRQP SLHKMSIMGH RIKIMPYSTF
     RLNLSVTSPY NADFDGDEMN MHVPQSFETR AEVLELMMVP KCIVSPQSNR PVMGIVQDTL
     LGCRKITKRD TLIEKDVFMN ILMWWQDFDG KIPAPTILKP RPIWTGKQVF NLIIPKQINL
     IRFSAWHSEE EKGFITPGDT MVRIEKGELL SGTLCKKSLG TGSGSLIHVI WEEVGPDAAR
     KFLGHTQWLV NYWLLQNGFS IGIGDTIADA STMETINDTI SKAKNAVKEL IKKAHEKQLE
     AEPGRTMMES FENRVNQVLN KARDDAGSSA QNSLSESNNL KAMVTAGSKG SFINISQMTA
     CVGQQNVEGK RIPFGFIDRT LPHFTKDDYG PESRGFVENS YLRGLTPQEF FFHAMGGREG
     LIDTAVKTSE TGYIQRRLVK AMEDIMVKYD GTVRNSLGDV IQFLYGEDGM DAVWIESQKL
     DSLKMKKPEF DNVFRYELDD ENWRPNYMLP EHVDDLKTIR EFRNVFEAEV QKLEADRYQL
     GSEITTTGDN SWPMPVNLKR LIWNAQKTFK IDFRRPSDMH PMEIVEAIDK LQERLKVVPG
     DDAMSIEAQK NATLFFNILL RSTFASKRVL KEYRLTKEAF EWVIGEIESR FLQSLVAPGE
     MIGCVAAQSI GEPATQMTLN TFHYAGVSAK NVTLGVPRLR EIINVAKKIK TPSLSVYLKP
     QVNQKKELAK NVQCALEYTT LRSVTHATEI WYDPDPLGTI IEEDTEFVQS YYEMPDEDID
     PDKISPWLLR IELNREMMVD KKLSMADIAE KINREFDDDL SCIFNDDNAD KLILRIRITN
     DEAPKGEIQD ESAEDDVFLK KIEGNMLTEM ALRGIPDINK VFIKEGKVNT FYQDDGFKAA
     NEWMLDTEGV NLLAVMCHED VDATRTTSNH LIEVIEVLGI EAVRRSLLDE LRVVISFDGS
     YVNYRHLAIL CDTMTYRGHL MAITRHGINR NDTGPLMRCS FEETVDILLD AAVYAESDHL
     RGVTENIMLG QLAPIGTGGC ALYLNDQMLQ QAIELQLPSY VEGLDFGMTP ARSPITGTPY
     HEGMMSPSYL LSPNIRASPI NTDASFSPYV GHMAFSPFPS PGGYSPSSGG YSPSSPVFTP
     EKGYSPLSPS YSPASPSYSP TSPSYTPGSP TYSPTSPNYS PTSPTYSPTS PSYSPTSPSY
     SPTSPSYSPT SPSYSPTSPS YSPTSPSYSP TSPVYSPTSP AYSPTSPAYS PTSPSYSPTS
     PSYSPTSPSY SPTSPSYSPT SPSYSPTSPS YSPTSPAYSP TSPGYSPTSP SYSPTSPSYS
     PTSPSYNPSS AKYSPSHAYS PSSPRMSPYS QTSPSYSPTS PTYSPTSPSY SQPSPSYSPT
     SPFNTSGGPS PDYSPTSPNY SPSGSYSPTA PGYSPSSTGQ GNDKDDKSAR
//

If you have problems or comments...

PBIL Back to PBIL home page