(data stored in ACNUC11299 zone)

HOGENOM: ORYSJ_8_PE629

ID   ORYSJ_8_PE629                        STANDARD;      PRT;   1871 AA.
AC   ORYSJ_8_PE629; Q0DKN9; B9FMH7;
DT   00-JAN-0000 (Rel. 1, Created)
DT   00-JAN-0000 (Rel. 2, Last sequence update)
DT   00-JAN-0000 (Rel. 3, Last annotation update)
DE   RecName: Full=DNA-directed RNA polymerase; EC=2.7.7 6; (ORYSJ_8.PE629).
GN   Name=Os05g0151000; ORFNames=OsJ_17146;
OS   ORYZA SATIVA JAPONICA GROUP.
OC   cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina;
OC   Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta;
OC   Liliopsida; commelinids; Poales; Poaceae; BEP clade; Ehrhartoideae;
OC   Oryzeae; Oryza.
OX   NCBI_TaxID=39947;
RN   [0]
RP   -.;
RG   -.;
RL   -.;
CC   -!- SEQ. DATA ORIGIN: Translated from the HOGENOM CDS ORYSJ_8.PE629.
CC       Oryza sativa Japonica Group chromosome 5 MSU6 full sequence 1..29894789
CC       annotated by Ensembl Genomes
CC   -!- ANNOTATIONS ORIGIN:Q0DKN9_ORYSJ
CC   -!- CATALYTIC ACTIVITY: Nucleoside triphosphate + RNA(n) = diphosphate
CC       + RNA(n+1).
CC   -!- SIMILARITY: Belongs to the RNA polymerase beta' chain family.
CC   -!- GENE_FAMILY: HOG000222975 [ FAMILY / ALN / TREE ]
DR   HOGENOM:Oryza_sativa_japonica_group;LOC_OS05G05860;LOC_OS05G05860.1;LOC_OS05G05860.1.
DR   UniProtKB/Swiss-Prot; Q0DKN9; B9FMH7; -.
DR   EMBL; AP008211; BAF16584.2; -; Genomic_DNA.
DR   EMBL; CM000142; EEE62357.1; -; Genomic_DNA.
DR   RefSeq; NP_001054670.2; NM_001061205.2.
DR   UniGene; Os.80310; -.
DR   STRING; Q0DKN9; -.
DR   EnsemblPlants; LOC_Os05g05860.1; LOC_Os05g05860.1; LOC_Os05g05860.
DR   GeneID; 4337831; -.
DR   KEGG; osa:4337831; -.
DR   GeneTree; EPGT00070000031197; -.
DR   PhylomeDB; Q0DKN9; -.
DR   ProtClustDB; CLSN2685306; -.
DR   GO; GO:0005665; C:DNA-directed RNA polymerase II, core complex; IEA:InterPro.
DR   GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR   GO; GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
DR   GO; GO:0006366; P:transcription from RNA polymerase II promoter; IEA:InterPro.
DR   InterPro; IPR000722; RNA_pol_asu.
DR   InterPro; IPR000684; RNA_pol_II_repeat_euk.
DR   InterPro; IPR006592; RNA_pol_N.
DR   InterPro; IPR007080; RNA_pol_Rpb1_1.
DR   InterPro; IPR007066; RNA_pol_Rpb1_3.
DR   InterPro; IPR007083; RNA_pol_Rpb1_4.
DR   InterPro; IPR007081; RNA_pol_Rpb1_5.
DR   InterPro; IPR007075; RNA_pol_Rpb1_6.
DR   InterPro; IPR007073; RNA_pol_Rpb1_7.
DR   Pfam; PF04997; RNA_pol_Rpb1_1; 1.
DR   Pfam; PF00623; RNA_pol_Rpb1_2; 1.
DR   Pfam; PF04983; RNA_pol_Rpb1_3; 1.
DR   Pfam; PF05000; RNA_pol_Rpb1_4; 1.
DR   Pfam; PF04998; RNA_pol_Rpb1_5; 1.
DR   Pfam; PF04992; RNA_pol_Rpb1_6; 1.
DR   Pfam; PF04990; RNA_pol_Rpb1_7; 1.
DR   SMART; SM00663; RPOLA_N; 1.
DR   PROSITE; PS00115; RNA_POL_II_REPEAT; 15.
DR   HOGENOMDNA; ORYSJ_8.PE629; -.
KW   LOC_Os05g05860-His-2caffold_90100000011;
KW   B8BAW1; B9FMH7; B9FZ53; Q0DKN9;
KW   DNA-directed RNA polymerase; Nucleotidyltransferase; Transcription;
KW   Transferase.
SQ   SEQUENCE   1871 AA;  UNKNOWN MW;  UNKNOWN CRC64;
     MDAARFPYSP AEVAKVEAVQ FGVLSPDEIM GLIIFRVIRF NRLSASLNAR TQKLHVECVR
     NTIFGMRQMS VVHIEHAETM EKGKPKPGGL SDPRMGTIDR KIKCETCMAG MAECPGHFGH
     LELAKPMFHI GFIKTVLSIM RCVCFNCSKI LADEDDIKFK QALKIRNPKN KLKRIYDACK
     NRKICAGGDN LDVQEQQGTD DPVKKRGGCG AQQPNITVDG MKMVAEYKAP KKKNDDQEQL
     PEPVDRKQIL SAERVLNVLK HISDEDCLLL GLNPKFARPD WMILQVLPIP PPPVRPSVMM
     DTSSRSEDDL THQLAMIIRH NENLRRQERN GAPAHIITEF AQLLQFHIAT YFDNELPGQP
     RATQRSGRPI KSICSRLKAK EGRIRGNLMG KRVDFSARTV ITPDPNINID ELGVPWSIAL
     NLTYPETVTP YNIERLKELV EYGPHPPPGK TGAKYIIRED GQRLDLRYVK KSSDQHLELG
     YKVERHLNDG DFVLFNRQPS LHKMSIMGHR IKIMPYSTFR LNLSVTSPYN ADFDGDEMNM
     HVPQSFETRA EVLELMMVPK CIVSPQSNRP VMGIVQDTLL GCRKITKRDT LIEKDVFMNI
     LMWWEDFDGK VPAPAILKPR PIWTGKQVFN LIIPKQINLI RFSGWHSEAE TRFITPGDTM
     VRIEKGELLS GTLCKKTLGT STGSLIHVIW EEVGPDAARK FLGHTQWLVN YWLLQNGFSI
     GIGDTIADAA TMENINETIS KAKNDVKKLI KQFRDNQLEA EAGRTTMESF ENRVNEVLNK
     ARDVAGSSAE KSLSESNNLK AMATAGSKGT FINISQMTAC VGQQNVEGKR IPFGFTNRTL
     PHFTKNDYGP ESRGFVENSY LRGLTPQEFF FHAMGGREGL IDTAVKTSET GYIQRRLVKA
     MEDIMVKYDG TVRNSLGDVI QFLYGEDGMD AIWIESQKLD SLKMKKAEFD NVFRYELDDE
     NWKPNYLSTQ HAEDLKTISE IRNVFEAEVQ KLEADRFQLG TEIATTGDNT WPMPVNLKRL
     IWNAQKTFKI DLRRPSDMHP MEIVDAIDKL QERLKVVPGD DDISIEAQKN ATLFFNILLR
     STFASKRVLK EYRLTKEAFE WVIGEIESRF LQSLVAPGEM IGCVAAQSIG EPATQMTLNT
     FHYAGVSAKN VTLGVPRLRE IINVAKNIKT PSLSVHLKPE VNKKKELAKN VQCALEYTTL
     RSVTHATEIW YDPDPLGTII EEDAEFVQSY YEMPDEDIDP DKISPWLLRI ELNREMMVDK
     KLSMADIAEK INHEFDDDLS CIFNDDNADK LILRVRITND EAQKGEIQDE YGEDDVFLKK
     IESNMLTEMA LRGIPGINKV FIKEGNVNKF EDNDGFKTEK GWMLDTEGVN LLAVMCHEDV
     DATRTTSNHL IEVIEVLGIE AVRRALLDEL RVVISFDGSY VNYRHLAVLC DTMTYRGHLM
     AITRHGINRN DTGPLMRCSF EETVDILLDA AVYAESDPLR GVSENIMLGQ LAPIGTGGCD
     LYLNDQMLKQ AIELQLPSYV EGLDFGMMTS ACSPISGTPY HQGMMSPSYL LSPDIRASPT
     AADAQFSPYV GGMAFSPVSS PGNYTPSSGG GYSPSPPVCT PGPGSFTSSS PYNPVSPFYS
     PASPLSCPLT SPSYVPTSLP HSPTSPIYSA TSPIYSPSSP IYSPTSLSYS PTSPVYSPTS
     PVYNPTSSAY SPTSPSYNPT SPSYSYSPTS PSYSPTSPSY SYSPTSPSYS PTSPSYNYSP
     TSPSYSPTSP SYSPTSPSYS PTSPSYSPTS PSYSPTSSAY SPTSPAYSPT SPGYSPTSPS
     YSPSSPSYNP SSVKYTPSHA YSPSSPNYYS STSPTYSPTS PSYSQPSPSY SPTSRVEEEA
     HEEAEEEEPK R
//

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