(data stored in ACNUC11299 zone)
HOGENOM: PEDHC_267_PE9
ID PEDHC_267_PE9 STANDARD; PRT; 1885 AA.
AC PEDHC_267_PE9; Q6W0F3;
DT 00-JAN-0000 (Rel. 1, Created)
DT 00-JAN-0000 (Rel. 2, Last sequence update)
DT 00-JAN-0000 (Rel. 3, Last annotation update)
DE RecName: Full=DNA-directed RNA polymerase; EC=2.7.7 6;Flags: Fragment;
DE (PEDHC_267.PE9).
GN Name=RPII;
OS PEDICULUS HUMANUS CORPORIS.
OC Phthiraptera; Pediculus.
OX NCBI_TaxID=121224;
RN [0]
RP -.;
RG -.;
RL -.;
CC -!- SEQ. DATA ORIGIN: Translated from the HOGENOM CDS PEDHC_267.PE9.
CC Pediculus humanus supercontig DS235250 PhumU1 full sequence 1..409602
CC annotated by Ensembl Genomes
CC -!- ANNOTATIONS ORIGIN:Q6W0F3_PEDHC
CC -!- CATALYTIC ACTIVITY: Nucleoside triphosphate + RNA(n) = diphosphate
CC + RNA(n+1).
CC -!- SIMILARITY: Belongs to the RNA polymerase beta' chain family.
CC -!- GENE_FAMILY: HOG000222975 [ FAMILY / ALN / TREE ]
DR HOGENOM:Pediculus_humanus;PHUM268230;PHUM268230-RA;PHUM268230-PA.
DR EMBL; AY316913; - ;
DR EMBL; AY316914; - ;
DR EMBL; AY316915; - ;
DR EMBL; AY316916; - ;
DR EMBL; AY316917; - ;
DR EMBL; AY316918; - ;
DR EMBL; AY316919; - ;
DR EMBL; AY316920; - ;
DR EMBL; AY316921; - ;
DR EMBL; AY316922; - ;
DR EMBL; AY316923; - ;
DR EMBL; AY316924; - ;
DR EMBL; AY316925; - ;
DR EMBL; AY316926; - ;
DR EMBL; AY316927; - ;
DR EMBL; AY316928; - ;
DR EMBL; AY316929; - ;
DR EMBL; FJ267459; - ;
DR EMBL; FJ267460; - ;
DR UniProtKB/Swiss-Prot; Q6W0F3; -.
DR EMBL; AY316913; AAQ55781.1; -; Genomic_DNA.
DR EMBL; AY316914; AAQ55782.1; -; Genomic_DNA.
DR EMBL; AY316915; AAQ55783.1; -; Genomic_DNA.
DR EMBL; AY316916; AAQ55784.1; -; Genomic_DNA.
DR EMBL; AY316917; AAQ55785.1; -; Genomic_DNA.
DR EMBL; AY316918; AAQ55786.1; -; Genomic_DNA.
DR EMBL; AY316919; AAQ55787.1; -; Genomic_DNA.
DR EMBL; AY316920; AAQ55788.1; -; Genomic_DNA.
DR EMBL; AY316921; AAQ55789.1; -; Genomic_DNA.
DR EMBL; AY316922; AAQ55790.1; -; Genomic_DNA.
DR EMBL; AY316923; AAQ55791.1; -; Genomic_DNA.
DR EMBL; AY316924; AAQ55792.1; -; Genomic_DNA.
DR EMBL; AY316925; AAQ55793.1; -; Genomic_DNA.
DR EMBL; AY316926; AAQ55794.1; -; Genomic_DNA.
DR EMBL; AY316927; AAQ55795.1; -; Genomic_DNA.
DR EMBL; AY316928; AAQ55796.1; -; Genomic_DNA.
DR EMBL; AY316929; AAQ55797.1; -; Genomic_DNA.
DR ProteinModelPortal; Q6W0F3; -.
DR STRING; Q6W0F3; -.
DR EnsemblMetazoa; PHUM268230-RA; PHUM268230-PA; PHUM268230.
DR GeneTree; EMGT00050000000220; -.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR GO; GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
DR InterPro; IPR007083; RNA_pol_Rpb1_4.
DR InterPro; IPR007081; RNA_pol_Rpb1_5.
DR InterPro; IPR007075; RNA_pol_Rpb1_6.
DR Pfam; PF05000; RNA_pol_Rpb1_4; 1.
DR Pfam; PF04998; RNA_pol_Rpb1_5; 1.
DR Pfam; PF04992; RNA_pol_Rpb1_6; 1.
DR HOGENOMDNA; PEDHC_267.PE9; -.
KW PHUM26823000028832-2caffold_90100000011;
KW B8XGL9; Q6W0F3; AY316913; AY316914; AY316915; AY316916; AY316917;
KW AY316919; AY316920; AY316921; AY316922; AY316923; AY316924; AY316925;
KW AY316927; AY316928; AY316929; FJ267459; FJ267460;
KW DNA-directed RNA polymerase; Nucleotidyltransferase; Transcription;
KW Transferase.
SQ SEQUENCE 1885 AA; UNKNOWN MW; UNKNOWN CRC64;
MATSDSKAPL RSVKRVQFGI LSPDEIRRMS VTDGGIKYPE TYEGGRPKIG GLMDPRQGVV
DRMSRCQTCA GNMTECPGHF GHIDLAKPVF HVGFLTKTIK ILRCVCFFCS KLLVSPNNAK
IKEIVTKSRG QPRKRLTFVY DLCKGKNICE GGDEMDITKD NADNPDNSKD KKGGHGGCGR
YQPNIRRTGL DLTAEWKHTN EDNQEKKIAL SAERVWEILK HITDEECLIL GMDPKFARPD
WMLVTVLPVP PLSVRPAVVM YGSARNQDDL THKLADIIKA NNELIRNEQA GAAAHIISEN
IKMLQFHVAT LVDNDMPGMP RAMQKSGKPL KALKARLKGK EGRIRGNLMG KRVDFSARTV
ITPDPNLRID QVGVPRSIAQ NLTFPEIITP FNIDKMQELV RRGNSQYPGA KYIIRDNGER
IDLRFHPRPS DLHLQCGYKV ERHIRDGDLV IFNRQPTLHK MSMMGHRVKV LPWSTFRMNL
SCTSPYNADF DGDEMNLHVP QSMETRAEVE NLHVTPRQII TPQANKPVMG IVQDTLTAVR
KMTKRDVFLE KEQMMNILMF LPIWDGKMPQ PAILKPKPLW TGKQVFSLII PGNVNMIRTH
STHPDEEDDG PYNCCGARRT YYGNFVQKTL GTSAGSLLHI CMLELGHEVC GQFYGNIQTV
INNWLLLEGH SIGIGDTIAD PQTYLEIQKA IKKAKEDVIE VIQKAHNMEL EPTPGNTLRQ
TFENQVNRIL NDARDKTGGS AKKSLTEYNN LKAMVVSGSK GSNINISQVI ACVGQQNVEG
KRIPFGFRKR TLPHFIKDDY GPESRGFVEN SYLAGLTPSE FFFHAMGGRE GLIDTAVKTA
ETGYIQRRLI KAMESVMVHY DGTVRNSVGQ LIQLRYGEDG LCGETVEFQT LPTIKLSNKA
FEKRFRFDAT NERYLRRIFN ENILKELMGS GEVISYLEKE WDQLQKDREA LRQIFPSGEN
KVVLPCNLQR MIWNVQKIFH INKRAPTDLS PLRVIEGVRD LLQKCVIVAG EDHLSKQANE
NATLLFQCLV RSTLCTKCVS EDMRLSTEAF EWLIGEIETR FQQAQCAPGE MVGALAAQSL
GEPATQMTLN TFHFAGVSSK NVTLGVPRLK EIINISKKPK APSLTVFLTG AAARDAEKAK
NVLCRLEHTT LRKVTANTAI YYDPDPQNTV IEEDQEFVTV YYEMPDFDPT RISPWLLRIE
LDRKRMTDKK LTMEQIAEKI NAGFGDDLNC IFNDDNAEKL VLRLRIMNND EKVTDEEENQ
DKMEDDMFLR CIEANMLSDM TLQGIEAIGK VYMHLPQNDS KKRIVITETG EFKAIAEWLL
ETDGTSLMKV LSERDVDPVR TYSNDICEIF SVLGIEAVRK SVEKEMNQVL QFYGLYVNYR
HLALLCDVMT AKGHLMAITR HGINRQDTGA LMRCSFEETV DVLMDAASHA ELDPMRGVSE
NIIMGQLPRM GTDKCKAGIE IPMSIGHGMM SSVGMMFGNA VTPSMSPQMT PWNQGETPAY
VSAWSPHAGS GMTPGGPSFS PSGSSDASGL SPGYSPWSPQ PGSPSSPGPS NSPYVPSPGG
GMSPSYSPSS PAFAPTSPSM TPTSSNYSPT SPSYSPSSPN YSPNSPSYSP TSPSYSPTSP
SYSPTSPSYS PTSPSYSPTS PSYSPTSPSY SPTSPSYSPT SPSYSPTSPS YSPTSPSYSP
TSPSYSPTSP SYSPTSPSYS RTSPSYSPTS PSYSPSSPNY TPASPSFSPT SPSLYSSPRY
SPASPSYSPG SPKYSPTSPS YSPTSPSYAS VSPQYTPTSP QYSPTSPTYS PTSPSYSPSS
PSHTPGASTR YSPTSPKYSP TSLSYSPASP QYSPSSSKYS PTSPTYTPTS PDYSASSPTY
SPTGPPSYSP TSPTYSPTSP EYDDR
//
If you have problems or comments...
Back to PBIL home page