HOGENOM: PEDHC_267_PE9

ID   PEDHC_267_PE9                        STANDARD;      PRT;   1885 AA.
AC   PEDHC_267_PE9; Q6W0F3;
DT   00-JAN-0000 (Rel. 1, Created)
DT   00-JAN-0000 (Rel. 2, Last sequence update)
DT   00-JAN-0000 (Rel. 3, Last annotation update)
DE   RecName: Full=DNA-directed RNA polymerase; EC=2.7.7 6;Flags: Fragment;
DE   (PEDHC_267.PE9).
GN   Name=RPII;
OS   PEDICULUS HUMANUS CORPORIS.
OC   Phthiraptera; Pediculus.
OX   NCBI_TaxID=121224;
RN   [0]
RP   -.;
RG   -.;
RL   -.;
CC   -!- SEQ. DATA ORIGIN: Translated from the HOGENOM CDS PEDHC_267.PE9.
CC       Pediculus humanus supercontig DS235250 PhumU1 full sequence 1..409602
CC       annotated by Ensembl Genomes
CC   -!- ANNOTATIONS ORIGIN:Q6W0F3_PEDHC
CC   -!- CATALYTIC ACTIVITY: Nucleoside triphosphate + RNA(n) = diphosphate
CC       + RNA(n+1).
CC   -!- SIMILARITY: Belongs to the RNA polymerase beta' chain family.
CC   -!- GENE_FAMILY: HOG000222975 [ FAMILY / ALN / TREE ]
DR   HOGENOM:Pediculus_humanus;PHUM268230;PHUM268230-RA;PHUM268230-PA.
DR   EMBL; AY316913; - ;
DR   EMBL; AY316914; - ;
DR   EMBL; AY316915; - ;
DR   EMBL; AY316916; - ;
DR   EMBL; AY316917; - ;
DR   EMBL; AY316918; - ;
DR   EMBL; AY316919; - ;
DR   EMBL; AY316920; - ;
DR   EMBL; AY316921; - ;
DR   EMBL; AY316922; - ;
DR   EMBL; AY316923; - ;
DR   EMBL; AY316924; - ;
DR   EMBL; AY316925; - ;
DR   EMBL; AY316926; - ;
DR   EMBL; AY316927; - ;
DR   EMBL; AY316928; - ;
DR   EMBL; AY316929; - ;
DR   EMBL; FJ267459; - ;
DR   EMBL; FJ267460; - ;
DR   UniProtKB/Swiss-Prot; Q6W0F3; -.
DR   EMBL; AY316913; AAQ55781.1; -; Genomic_DNA.
DR   EMBL; AY316914; AAQ55782.1; -; Genomic_DNA.
DR   EMBL; AY316915; AAQ55783.1; -; Genomic_DNA.
DR   EMBL; AY316916; AAQ55784.1; -; Genomic_DNA.
DR   EMBL; AY316917; AAQ55785.1; -; Genomic_DNA.
DR   EMBL; AY316918; AAQ55786.1; -; Genomic_DNA.
DR   EMBL; AY316919; AAQ55787.1; -; Genomic_DNA.
DR   EMBL; AY316920; AAQ55788.1; -; Genomic_DNA.
DR   EMBL; AY316921; AAQ55789.1; -; Genomic_DNA.
DR   EMBL; AY316922; AAQ55790.1; -; Genomic_DNA.
DR   EMBL; AY316923; AAQ55791.1; -; Genomic_DNA.
DR   EMBL; AY316924; AAQ55792.1; -; Genomic_DNA.
DR   EMBL; AY316925; AAQ55793.1; -; Genomic_DNA.
DR   EMBL; AY316926; AAQ55794.1; -; Genomic_DNA.
DR   EMBL; AY316927; AAQ55795.1; -; Genomic_DNA.
DR   EMBL; AY316928; AAQ55796.1; -; Genomic_DNA.
DR   EMBL; AY316929; AAQ55797.1; -; Genomic_DNA.
DR   ProteinModelPortal; Q6W0F3; -.
DR   STRING; Q6W0F3; -.
DR   EnsemblMetazoa; PHUM268230-RA; PHUM268230-PA; PHUM268230.
DR   GeneTree; EMGT00050000000220; -.
DR   GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR   GO; GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
DR   InterPro; IPR007083; RNA_pol_Rpb1_4.
DR   InterPro; IPR007081; RNA_pol_Rpb1_5.
DR   InterPro; IPR007075; RNA_pol_Rpb1_6.
DR   Pfam; PF05000; RNA_pol_Rpb1_4; 1.
DR   Pfam; PF04998; RNA_pol_Rpb1_5; 1.
DR   Pfam; PF04992; RNA_pol_Rpb1_6; 1.
DR   HOGENOMDNA; PEDHC_267.PE9; -.
KW   PHUM26823000028832-2caffold_90100000011;
KW   B8XGL9; Q6W0F3; AY316913; AY316914; AY316915; AY316916; AY316917;
KW   AY316919; AY316920; AY316921; AY316922; AY316923; AY316924; AY316925;
KW   AY316927; AY316928; AY316929; FJ267459; FJ267460;
KW   DNA-directed RNA polymerase; Nucleotidyltransferase; Transcription;
KW   Transferase.
SQ   SEQUENCE   1885 AA;  UNKNOWN MW;  UNKNOWN CRC64;
     MATSDSKAPL RSVKRVQFGI LSPDEIRRMS VTDGGIKYPE TYEGGRPKIG GLMDPRQGVV
     DRMSRCQTCA GNMTECPGHF GHIDLAKPVF HVGFLTKTIK ILRCVCFFCS KLLVSPNNAK
     IKEIVTKSRG QPRKRLTFVY DLCKGKNICE GGDEMDITKD NADNPDNSKD KKGGHGGCGR
     YQPNIRRTGL DLTAEWKHTN EDNQEKKIAL SAERVWEILK HITDEECLIL GMDPKFARPD
     WMLVTVLPVP PLSVRPAVVM YGSARNQDDL THKLADIIKA NNELIRNEQA GAAAHIISEN
     IKMLQFHVAT LVDNDMPGMP RAMQKSGKPL KALKARLKGK EGRIRGNLMG KRVDFSARTV
     ITPDPNLRID QVGVPRSIAQ NLTFPEIITP FNIDKMQELV RRGNSQYPGA KYIIRDNGER
     IDLRFHPRPS DLHLQCGYKV ERHIRDGDLV IFNRQPTLHK MSMMGHRVKV LPWSTFRMNL
     SCTSPYNADF DGDEMNLHVP QSMETRAEVE NLHVTPRQII TPQANKPVMG IVQDTLTAVR
     KMTKRDVFLE KEQMMNILMF LPIWDGKMPQ PAILKPKPLW TGKQVFSLII PGNVNMIRTH
     STHPDEEDDG PYNCCGARRT YYGNFVQKTL GTSAGSLLHI CMLELGHEVC GQFYGNIQTV
     INNWLLLEGH SIGIGDTIAD PQTYLEIQKA IKKAKEDVIE VIQKAHNMEL EPTPGNTLRQ
     TFENQVNRIL NDARDKTGGS AKKSLTEYNN LKAMVVSGSK GSNINISQVI ACVGQQNVEG
     KRIPFGFRKR TLPHFIKDDY GPESRGFVEN SYLAGLTPSE FFFHAMGGRE GLIDTAVKTA
     ETGYIQRRLI KAMESVMVHY DGTVRNSVGQ LIQLRYGEDG LCGETVEFQT LPTIKLSNKA
     FEKRFRFDAT NERYLRRIFN ENILKELMGS GEVISYLEKE WDQLQKDREA LRQIFPSGEN
     KVVLPCNLQR MIWNVQKIFH INKRAPTDLS PLRVIEGVRD LLQKCVIVAG EDHLSKQANE
     NATLLFQCLV RSTLCTKCVS EDMRLSTEAF EWLIGEIETR FQQAQCAPGE MVGALAAQSL
     GEPATQMTLN TFHFAGVSSK NVTLGVPRLK EIINISKKPK APSLTVFLTG AAARDAEKAK
     NVLCRLEHTT LRKVTANTAI YYDPDPQNTV IEEDQEFVTV YYEMPDFDPT RISPWLLRIE
     LDRKRMTDKK LTMEQIAEKI NAGFGDDLNC IFNDDNAEKL VLRLRIMNND EKVTDEEENQ
     DKMEDDMFLR CIEANMLSDM TLQGIEAIGK VYMHLPQNDS KKRIVITETG EFKAIAEWLL
     ETDGTSLMKV LSERDVDPVR TYSNDICEIF SVLGIEAVRK SVEKEMNQVL QFYGLYVNYR
     HLALLCDVMT AKGHLMAITR HGINRQDTGA LMRCSFEETV DVLMDAASHA ELDPMRGVSE
     NIIMGQLPRM GTDKCKAGIE IPMSIGHGMM SSVGMMFGNA VTPSMSPQMT PWNQGETPAY
     VSAWSPHAGS GMTPGGPSFS PSGSSDASGL SPGYSPWSPQ PGSPSSPGPS NSPYVPSPGG
     GMSPSYSPSS PAFAPTSPSM TPTSSNYSPT SPSYSPSSPN YSPNSPSYSP TSPSYSPTSP
     SYSPTSPSYS PTSPSYSPTS PSYSPTSPSY SPTSPSYSPT SPSYSPTSPS YSPTSPSYSP
     TSPSYSPTSP SYSPTSPSYS RTSPSYSPTS PSYSPSSPNY TPASPSFSPT SPSLYSSPRY
     SPASPSYSPG SPKYSPTSPS YSPTSPSYAS VSPQYTPTSP QYSPTSPTYS PTSPSYSPSS
     PSHTPGASTR YSPTSPKYSP TSLSYSPASP QYSPSSSKYS PTSPTYTPTS PDYSASSPTY
     SPTGPPSYSP TSPTYSPTSP EYDDR
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