(data stored in ACNUC11299 zone)

HOGENOM: PHATR_13_PE234

ID   PHATR_13_PE234                       STANDARD;      PRT;   1706 AA.
AC   PHATR_13_PE234; B7G9I2;
DT   00-JAN-0000 (Rel. 1, Created)
DT   00-JAN-0000 (Rel. 2, Last sequence update)
DT   00-JAN-0000 (Rel. 3, Last annotation update)
DE   Flags: Fragments;
DE   RecName: Full=DNA-directed RNA polymerase; EC=2.7.7 6;Flags: Fragment;
DE   (PHATR_13.PE234).
GN   ORFNames=PHATRDRAFT_15555;
OS   PHAEODACTYLUM TRICORNUTUM.
OC   Eukaryota; Stramenopiles; Bacillariophyta; Bacillariophyceae;
OC   Bacillariophycidae; Naviculales; Phaeodactylaceae; Phaeodactylum.
OX   NCBI_TaxID=2850;
RN   [0]
RP   -.;
RG   -.;
RL   -.;
CC   -!- SEQ. DATA ORIGIN: Translated from the HOGENOM CDS PHATR_13.PE234.
CC       Phaeodactylum tricornutum chromosome 20 Phatr2 full sequence 1..683011
CC       annotated by Ensembl Genomes
CC   -!- ANNOTATIONS ORIGIN:B7G9I2_PHATC
CC   -!- CATALYTIC ACTIVITY: Nucleoside triphosphate + RNA(n) = diphosphate
CC       + RNA(n+1).
CC   -!- SIMILARITY: Belongs to the RNA polymerase beta' chain family.
CC   -!- GENE_FAMILY: HOG000222975 [ FAMILY / ALN / TREE ]
DR   HOGENOM:Phaeodactylum_tricornutum;PHATR15555;PHATR15555;PHATR15555.
DR   EMBL; CM000622; - ;
DR   EMBL; EU276082; - ;
DR   UniProtKB/Swiss-Prot; B7G9I2; -.
DR   EMBL; CM000622; EEC44959.1; -; Genomic_DNA.
DR   RefSeq; XP_002183777.1; XM_002183741.1.
DR   UniGene; Ptc.1145; -.
DR   EnsemblProtists; Phatr15555; Phatr15555; Phatr15555.
DR   GeneID; 7195330; -.
DR   KEGG; pti:PHATRDRAFT_15555; -.
DR   ProtClustDB; CLSN2685306; -.
DR   GO; GO:0005665; C:DNA-directed RNA polymerase II, core complex; IEA:InterPro.
DR   GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR   GO; GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
DR   GO; GO:0006366; P:transcription from RNA polymerase II promoter; IEA:InterPro.
DR   InterPro; IPR000722; RNA_pol_asu.
DR   InterPro; IPR000684; RNA_pol_II_repeat_euk.
DR   InterPro; IPR006592; RNA_pol_N.
DR   InterPro; IPR007080; RNA_pol_Rpb1_1.
DR   InterPro; IPR007066; RNA_pol_Rpb1_3.
DR   InterPro; IPR007083; RNA_pol_Rpb1_4.
DR   InterPro; IPR007081; RNA_pol_Rpb1_5.
DR   InterPro; IPR007075; RNA_pol_Rpb1_6.
DR   InterPro; IPR007073; RNA_pol_Rpb1_7.
DR   Pfam; PF04997; RNA_pol_Rpb1_1; 1.
DR   Pfam; PF00623; RNA_pol_Rpb1_2; 1.
DR   Pfam; PF04983; RNA_pol_Rpb1_3; 1.
DR   Pfam; PF05000; RNA_pol_Rpb1_4; 1.
DR   Pfam; PF04998; RNA_pol_Rpb1_5; 1.
DR   Pfam; PF04992; RNA_pol_Rpb1_6; 1.
DR   Pfam; PF04990; RNA_pol_Rpb1_7; 1.
DR   Pfam; PF05001; RNA_pol_Rpb1_R; 24.
DR   SMART; SM00663; RPOLA_N; 1.
DR   PROSITE; PS00115; RNA_POL_II_REPEAT; 24.
DR   HOGENOMDNA; PHATR_13.PE234; -.
KW   Phatr1555500028832-2caffold_90100000011; Phatr15555; B2KXL6; B7G9I2;
KW   EU276082;
KW   Complete proteome; DNA-directed RNA polymerase;
KW   Nucleotidyltransferase; Reference proteome; Transcription;
KW   Transferase.
SQ   SEQUENCE   1706 AA;  UNKNOWN MW;  UNKNOWN CRC64;
     ETQVNGQPVY GGANDPRLGN LHDKSDPGYF GHLDLAKPVY HQGFFNTTLR ALRCVCFHCS
     RLRMLPDEFK FQKAIQIKSR KRRLEALHES LRGKKKCDHC QGVQPKYTKV DLHVEADFPE
     DGMHGSTGGG GDSKQFLSGD TVVKIFKQIR EEDIVLLGLD VQHARPDWLL VQVLPVPPLH
     VRPSVTVGGG TQSSEDDLTH QLVNVIKSNL SLQQAVSNGE PQIVVEQFEL ALQHNVAAFM
     DNELRGMPQV TQRSGRPLKT ITQRLKGKEG RIRGNLMGKR VDFSARTVIT ADPNLGIHQV
     GVPRSVAMNL TVPIRVTAFN QAELSALVAN GPTMHPGAKH IIRSDGTRID LRYVKNKSEL
     LLAHGWIVER HLRDDDIVLF NRQPSLHKMS IMGHKAKVLD WSTFRLNLSC TSPYNADFDG
     DEMNLHVPQG LAARAEAELM MLSSRVIVSG QSNRPVMSIV QDSLLATQKM TKRSVFIEKD
     LCYNMLMWVP QWNGQIPIPA VIKPKELWTG KQLLSTILPK VNLKSKANNG PGKDARGKNM
     PNTFNMYDHL VTIQDGELLE GTVDKKTIGS SMGGLIHTAW LDVGFEETAR FMNQIQQLVN
     HWILQYSFSI GAIDAVADAD TMRQIESTID KAKRQVQDLV RQGQLGELEI QPGRTMIESF
     EQLVNKVLNT ARDHAGKSAQ SSLDETNSVK AMVTAGSKGS FINISQIIAC VGQQNVEGKR
     IPYGFKKRTL PHFSKDDIGS ESRGFVENSY LRGLSPQEFF FHAMGGREGL IDTACKTAET
     GYIQRRLVKA METVMARYDG TLRTSSGQIV QFLYGEDGMD AVWIEKQNFD SLTLAKPEFN
     KRFLFDTSSP EFGHDEQGIP FLEPDVIEEC RRDPDIQATL DQEIEILRED QAILRIVMRS
     REAGRESDDS SYAPGNVRRV IHNAMRQFRI DKSKPTDLHP TEVIQIVNNL LERLIVVVGN
     DPLSVEAQSN ATTLYRILIR TMLSSKRVLK DWRLSKAALN WVVGEIETRF NIAMVNPGEM
     AGVLAAQSIG EPATQMTLNT FHYAGVSAKN VTLGVPRLKE IINVAKTPKT PGLTIYLQEE
     VSGDEKVAEQ VVAMLEFTVL GDVVKKTEIY YDPDVKNTVV TKDREFVKEF YDFTDKTDDD
     LRRMSPWVLR VELDKPLLYV KKIKMEEIAK EIGEEYGADL NVEVTDDNAD EMVVRIRIVN
     DTPFNSGQTD EGGNLMDDQP EVGQEDDIFL KRLEKSMLSS LKLRGVDHVK KVFMRGGAKR
     TVWDDVKGFG VRDEWVLETD GTNLMAVLGV DYVDGTRSVS NDIVEVFVAL GIEGVRGALL
     SELRNVISFD GSYVNYRHLA CLVDVMTMQG HLMAIDRHGI NRVDTGPLLR ASFEETVDML
     MDAAVYAEEE ILKGVTENIM MGQLARVGTG DVDLLLDEDK VVREAVEVVV DEFAVDKDLG
     MAGVGGVGGA TPYATTPFAA SPMVGDGAAA SPFVDGGAAF SPAVGAASFS PAYSPDSGSY
     GSGFASGSYG AGDSPAYSPT SPQYSPTSPA YSPTSPAYSP TSPAYSPTSP AYSPTSPAYS
     PTSPAYSPTS PAYSPTSPAY SPTSPAYSPT SPAYSPTSPA YSPTSPAYSP TSPAYSPTSP
     AYSPTSPAYS PTSPAYSPTS PAYSPTSPAY SPTSPAYSPT SPAYSPTSPA YSPTSPAYSP
     TSPAYSPTSP AYSPSGGDDK KDEMED
//

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