HOGENOM: PLAVI_13_PE214

ID   PLAVI_13_PE214                       STANDARD;      PRT;   2379 AA.
AC   PLAVI_13_PE214; A5K7P4;
DT   00-JAN-0000 (Rel. 1, Created)
DT   00-JAN-0000 (Rel. 2, Last sequence update)
DT   00-JAN-0000 (Rel. 3, Last annotation update)
DE   RecName: Full=DNA-directed RNA polymerase; EC=2.7.7 6; (PLAVI_13.PE214).
GN   ORFNames=PVX_095320;
OS   PLASMODIUM VIVAX.
OC   Eukaryota; Alveolata; Apicomplexa; Aconoidasida; Haemosporida; Plasmodium.
OX   NCBI_TaxID=5855;
RN   [0]
RP   -.;
RG   -.;
RL   -.;
CC   -!- SEQ. DATA ORIGIN: Translated from the HOGENOM CDS PLAVI_13.PE214.
CC       Plasmodium vivax chromosome 8 EPr2 full sequence 1..1678596 annotated b
CC       Ensembl Genomes
CC   -!- ANNOTATIONS ORIGIN:A5K7P4_PLAVS
CC   -!- CATALYTIC ACTIVITY: Nucleoside triphosphate + RNA(n) = diphosphate
CC       + RNA(n+1).
CC   -!- SIMILARITY: Belongs to the RNA polymerase beta' chain family.
CC   -!- GENE_FAMILY: HOG000222975 [ FAMILY / ALN / TREE ]
DR   HOGENOM:Plasmodium_vivax;PVX_095320;PVX_095320;PVX_095320.
DR   UniProtKB/Swiss-Prot; A5K7P4; -.
DR   EMBL; AAKM01000008; EDL44803.1; -; Genomic_DNA.
DR   RefSeq; XP_001614530.1; XM_001614480.1.
DR   ProteinModelPortal; A5K7P4; -.
DR   SMR; A5K7P4; 1339-1382.
DR   STRING; A5K7P4; -.
DR   GeneID; 5473819; -.
DR   KEGG; pvx:PVX_095320; -.
DR   EuPathDB; EupathDB:PVX_095320; -.
DR   GeneTree; EPrGT00050000001127; -.
DR   ProtClustDB; CLSZ2433631; -.
DR   GO; GO:0005665; C:DNA-directed RNA polymerase II, core complex; IEA:InterPro.
DR   GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR   GO; GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
DR   GO; GO:0006366; P:transcription from RNA polymerase II promoter; IEA:InterPro.
DR   InterPro; IPR000722; RNA_pol_asu.
DR   InterPro; IPR000684; RNA_pol_II_repeat_euk.
DR   InterPro; IPR006592; RNA_pol_N.
DR   InterPro; IPR007080; RNA_pol_Rpb1_1.
DR   InterPro; IPR007066; RNA_pol_Rpb1_3.
DR   InterPro; IPR007083; RNA_pol_Rpb1_4.
DR   InterPro; IPR007081; RNA_pol_Rpb1_5.
DR   InterPro; IPR007075; RNA_pol_Rpb1_6.
DR   InterPro; IPR007073; RNA_pol_Rpb1_7.
DR   Pfam; PF04997; RNA_pol_Rpb1_1; 1.
DR   Pfam; PF00623; RNA_pol_Rpb1_2; 1.
DR   Pfam; PF04983; RNA_pol_Rpb1_3; 1.
DR   Pfam; PF05000; RNA_pol_Rpb1_4; 1.
DR   Pfam; PF04998; RNA_pol_Rpb1_5; 1.
DR   Pfam; PF04992; RNA_pol_Rpb1_6; 2.
DR   Pfam; PF04990; RNA_pol_Rpb1_7; 1.
DR   SMART; SM00663; RPOLA_N; 1.
DR   PROSITE; PS00115; RNA_POL_II_REPEAT; 7.
DR   HOGENOMDNA; PLAVI_13.PE214; -.
KW   PVX_09532030012637820036002503210000011;
KW   A5K7P4;
KW   Complete proteome; DNA-directed RNA polymerase;
KW   Nucleotidyltransferase; Reference proteome; Transcription;
KW   Transferase.
SQ   SEQUENCE   2379 AA;  UNKNOWN MW;  UNKNOWN CRC64;
     MTVDLNVPYS ACELKRVKRL ELGVLDPEII KKIGVCEIVN VDLYKDGLPR EGGLNDIRMG
     TIDYKTLCGT CNMNVKYCPG HFGYIELAKP MYHYGFMNVV LNVLRCVCYH CGRLLCNTSN
     SKVKFIEKIK VNSLRLKRLS EVCQGIKVCD HSSPQEEDTL HLNDNSVDNF YNNDLSNLNV
     NQQMLLNPNS YGNIFEIVNK EDVDCGCVQP KYSREGPNMF IQFLHSSEED IDESKRKLSA
     EEALDILKKI RKEEMPILGF NSDRCIPASL ILTFIPIPPP CARPYVQYGN QRSEDDLTLK
     LLDIVKTNIQ LKRQTDRGAK SHVLQDLCAL LQFHITTLFD NDIPGMPIAT TRSKKPIKAI
     RTRLKGKEGR LRGNLMGKRV DFSARTVITG DPNLNIDYIG VPKSVAMTLT FCETVTPLNY
     DDLKKLVERG PYEWPGAKYI IRDNGTKYDL RHVRKNSERE LEYGYKVERH MTDEDYILFN
     RQPSLHKMSI MGHKAKILPY STFRLNLAVT SPYNADFDGD EMNLHLAQSH ETRSEIKHLM
     IVQKQIVSPQ GNKPVMGIVQ DSLLAIRKFT RRDNFLTKEE VMSLLIWIPY WNHVIPTPAI
     MKPKALWTGK QIFSMLLQFE DLERLNDPLG NAKMGATNAS GFRVEDEMGR GNSGGSGAHL
     HPHSPLAIGD TLSGNVKNQA TINEATRTNS TDGAFKGGIS GWGRNVKINL MRDSSTSCKD
     DNPYCSVNDG KVIIKNNELL CGIICKRTVG SSSGSLIHIL WHEMGPDKTK DFISALQKVT
     NNWLEYIGFT VSCSDIIASN KVLDKVKDIL SKSKKEVSKI VKKAQRGELE CQPGKSLYES
     FETRVNNELN CAREMAGKVA SESLDERNNI FSMVASGSKG SIINISQIIS CVGQQNVEGK
     RIPFGFNHRS LPHFIKFDYG PESRGFVSNS YLSGLTPQEV FFHAMGGREG IIDTACKTSE
     TGYIQRRLIK AMEDVMVQYD RTVRNSYGDI IQFLYGEDGM AGEYIEDQII DLMKLDNKEV
     KKLYKYNFDD DEDDDREDSY GKDYYLKGGQ HRKGSYMEYS KQNVLNQEFE ELLKCKNNIC
     KEIFPDGDVR QHLPINMNRL IEFAKSQFPF VPVLGGKVKD PIGASGMGPK RGKLKKREEK
     KGKNKKKKEK KATPSHDQAK AASAASNADA ALGDPTDELR NSEFVSEIKK EYEANELAGA
     MKGQGAYSGF EPFDEDLAEG SAEEGGDEGS GEEDSDGNES GEESGDEGSG DDRSLVNPVD
     IVHKVNRFLE KLVIIKQINS NDTLSLEAQN NATVLLKAHL RTYLNSKLLT QTHKISMKGI
     DWLLQEIEKN FYKSLCHPGE CVGALAAQSI GEPATQMTLN TFHFAGVGSK NVTLGVPRLK
     ELINIVKNVK TPSTTIYLDD VVSNDQQKAK DILTKLEYTT LKQLTSHAQI IYDPNTTSTI
     LEEDKLWVDE FYEFPDEDDT QYTLGEWVLR IQLTNIHVNE KKLTMKEIVY IIYSVFSSDE
     LDIIYTDDNS EDLILRIRVK YLNGEYNFLN DDPDQAQEDE YEEEEEEEEE EENYNIGNTF
     KAKKNVEADG NQTTQSKKND KDDNQSVSSN RSRNNSVNSE NRFGSANGSA SGTESEDDDG
     AGNPHRDEAA VKDKTGKGKS ATKMKKLKEE SANRADSNYV EGYEEADLFV KGEGRSGESA
     VGSGVGSGAA NGAANVAPNG TTEDMFGKAN LNGEEDALAA KGRSSLSGAN AGGGTTGGNA
     PSGNNANSLD MNSMRNITNL SNPVYMKEDT EDTFLKKLME QCLSTLKLRG IENITKVYMR
     EESKITYDST NGKFVRSSHW VLDTDGCNLE HIFCASHVDY KKTVSNDIVE IFEVLGIEAV
     RRALLKELRT VISFDSSYVN YRHLSILCDV MTQRGYLMSI TRHGINRVDR GPLVKCSFEE
     TVEILLEAAA FAQVDNLKGI TENIMLGQLC KIGTGVFDII IDNQKLSDAN QNLETLMDIT
     SAGFTTPDSH HGITPDGLQS PVAINTLNSP LPFSPTYNVN LLSPTAPLDS VNGILSPQCL
     QNYGDGSGGG ESIMSPSKND FNNLDTLKLG GKFSPTQSPK SPTSVIHSPF SPFDNHNQQA
     LDPSMLFSPK NNNVGSSSNS MSMMNYNVFS PKANLNSIQS PAMLYSPNRA LDLFSPKQQT
     QNNIYSPSYS PTSPTYHLTN PASGGGSSGL NGTKAYYSPT SPTNQLDEVN PNMMKYHSVV
     SPVYSVTSPK YSPTSPKYSP TSPKYSPTSP KYSPTSPKYS PTSPKYSPTS PQYSPSSPVP
     NNPSSPHYSP YAIASPKFSP TSPAYSISSP VYDQSGNARS KSQHPLSPAY ILQSPVQVKQ
     HIQDVSVFSP IQQANAEEVQ NDDPFSPMPY NMEEDEMEQ
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