(data stored in ACNUC9543 zone)

HOGENOM: POPTR_7_PE563

ID   POPTR_7_PE563                        STANDARD;      PRT;   1177 AA.
AC   POPTR_7_PE563; B9N9A7;
DT   00-JAN-0000 (Rel. 1, Created)
DT   00-JAN-0000 (Rel. 2, Last sequence update)
DT   00-JAN-0000 (Rel. 3, Last annotation update)
DE   SubName: Full=Predicted protein; (POPTR_7.PE563).
GN   ORFNames=POPTRDRAFT_586590;
OS   POPULUS TRICHOCARPA.
OC   Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta;
OC   Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; eudicotyledons;
OC   core eudicotyledons; rosids; fabids; Malpighiales; Salicaceae; Saliceae;
OC   Populus.
OX   NCBI_TaxID=3694;
RN   [0]
RP   -.;
RG   -.;
RL   -.;
CC   -!- SEQ. DATA ORIGIN: Translated from the HOGENOM CDS POPTR_7.PE563.
CC       Populus trichocarpa chromosome 15 JGI2.0 full sequence 1..15134944
CC       annotated by Ensembl Genomes
CC   -!- ANNOTATIONS ORIGIN:B9N9A7_POPTR
CC   -!- SIMILARITY: Contains 1 helicase ATP-binding domain.
CC   -!- SIMILARITY: Contains 1 helicase C-terminal domain.
CC   -!- GENE_FAMILY: HOG000175261 [ FAMILY / ALN / TREE ]
DR   HOGENOM:Populus_trichocarpa;POPTR_0015S05960;POPTR_0015S05960.1;POPTR_0015S05960.1.
DR   EMBL; DS017338; - ;
DR   UniProtKB/Swiss-Prot; B9N9A7; -.
DR   EMBL; DS017338; EEF12201.1; -; Genomic_DNA.
DR   RefSeq; XP_002331832.1; XM_002331796.1.
DR   UniGene; Pth.8031; -.
DR   ProteinModelPortal; B9N9A7; -.
DR   EnsemblPlants; POPTR_0015s05960.1; POPTR_0015s05960.1; POPTR_0015s05960.
DR   GeneID; 7472805; -.
DR   KEGG; pop:POPTR_586590; -.
DR   GeneTree; EPGT00070000028249; -.
DR   OMA; EMSPTSI; -.
DR   ProtClustDB; CLSN2684863; -.
DR   GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR   GO; GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.
DR   GO; GO:0003723; F:RNA binding; IEA:InterPro.
DR   InterPro; IPR014001; DEAD-like_helicase.
DR   InterPro; IPR011545; DNA/RNA_helicase_DEAD/DEAH_N.
DR   InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS.
DR   InterPro; IPR011709; DUF1605.
DR   InterPro; IPR007502; Helicase-assoc_dom.
DR   InterPro; IPR001650; Helicase_C.
DR   InterPro; IPR012340; NA-bd_OB-fold.
DR   InterPro; IPR016027; NA-bd_OB-fold-like.
DR   InterPro; IPR003029; Rbsml_prot_S1_RNA-bd_dom.
DR   InterPro; IPR022967; RNA-binding_domain_S1.
DR   Gene3D; G3DSA:2.40.50.140; OB_NA_bd_sub; 1.
DR   Pfam; PF00270; DEAD; 1.
DR   Pfam; PF04408; HA2; 1.
DR   Pfam; PF00271; Helicase_C; 1.
DR   Pfam; PF07717; OB_NTP_bind; 1.
DR   Pfam; PF00575; S1; 1.
DR   SMART; SM00487; DEXDc; 1.
DR   SMART; SM00847; HA2; 1.
DR   SMART; SM00490; HELICc; 1.
DR   SMART; SM00316; S1; 1.
DR   SUPFAM; SSF50249; Nucleic_acid_OB; 1.
DR   PROSITE; PS00690; DEAH_ATP_HELICASE; 1.
DR   PROSITE; PS51192; HELICASE_ATP_BIND_1; 1.
DR   PROSITE; PS51194; HELICASE_CTER; 1.
DR   PROSITE; PS50126; S1; 1.
DR   HOGENOMDNA; POPTR_7.PE563; -.
KW   POPTR_0015s0596034820036002503210000011;
KW   DS017338; B9N9A7;
KW   ATP-binding; Helicase; Hydrolase; Nucleotide-binding.
SQ   SEQUENCE   1177 AA;  UNKNOWN MW;  UNKNOWN CRC64;
     MATAAENDAG LKKLEYLSLV SKVCSELETH LGFGDKILAE FITELGRSCE TVDEFDAKLK
     ENGAEMPDYF VRTLLTIIHA ILPPKAEKEG KKDKENDGSG KDSKFKALSI KDSRDRVKEI
     DRELEIEAEE KSRRENEDRH RERDNDDRHI ERDRRGRDRD RERDRDRDTD RERERDMYDR
     DDRRRDRGRR RDGHDIEDGE GERERRNGKH GYGGGNSNEP ELYGVYKGRV SRVMDTGCFV
     ELSDFKGKEG LVHVSQIATR RVGNAKDVVK RDQEVYVKVI SVSGNKLSLS MRDVDQNSGK
     DLLPLKKRDD EEDGFRSNAL GLSKEGPVTR TGLSGIRIVE EEDTGPSRRP LKRMSSPEKW
     EAKQLIASGV LSVQEYPMYD EEIDGLLYQE EGVEEELEIE MNEDEPAFLQ GQTRYSVDMS
     PVKIFKNPEG SLSRAAALQS ALIKERREVR EQQQRTMLDS IPKDLNRPWE DPMPETGERH
     LAQELRGVGL SAYDMPEWKK DAFGKALTYG QRSKLSIQEQ RQSLPIYKLK KELIQAVHDN
     QVLVVIGETG SGKTTQVTQY LAEAGYTTRG KIGCTQPRRV AAMSVAKRVA EEFGCRLGEE
     VGYAIRFEDC TGPDTVIKYM TDGMLLREIL IDENLSQYSV IMLDEAHERT IHTDVLFGLL
     KKLVKRRPDL RLIVTSATLD AEKFSGYFFN CNIFTIPGRT FPVEILYTKQ PESDYLDASL
     ITVLQIHLTE PEGDILLFLT GQEEIDFACQ SLYERMKGLG KNVPELIILP VYSALPSEMQ
     SRIFDPAPPG KRKVVVATNI AEASLTIDGI FYVIDPGFAK QNVYNPKQGL DSLVITPISQ
     ASAKQRAGRA GRTGPGKCYR LYTESAYRNE MSPTSIPEIQ RINLGFTTLT MKAMGINDLL
     SFDFMDPPSP QALISAMEQL YSLGALDEEG LLTKLGRKMA EFPLDPPLSK MLLASVDLGC
     SDEILTMIAM IQTGNIFYRP REKQAQADQK RAKFFQPEGD HLTLLAVYEA WKAKNFSGPW
     CFENFVQSRS LRRAQDVRKQ LLSIMDKYKL DVVSAGKNFT KIRKAITAGF FFHAARKDPQ
     EGYRTLVENQ PVYIHPSSAL FQRQPDWVIY HELVMTTKEY MREVTVIDPK WLVELAPRFF
     KVSDPTKMSK RKRQERIEPL YDRYHEPNSW RLSKRRA
//

If you have problems or comments...

PBIL Back to PBIL home page