(data stored in ACNUC7421 zone)

HOGENOM: PSEA6_1_PE1007

ID   PSEA6_1_PE1007                       STANDARD;      PRT;   329 AA.
AC   PSEA6_1_PE1007; Q15X48;
DT   00-JAN-0000 (Rel. 1, Created)
DT   00-JAN-0000 (Rel. 2, Last sequence update)
DT   00-JAN-0000 (Rel. 3, Last annotation update)
DE   RecName: Full=DNA-directed RNA polymerase subunit alpha; Short=RNAP
DE   subunit alpha; EC=2.7.7 6;AltName: Full=RNA polymerase subunit
DE   alpha;AltName: Full=Transcriptase subunit alpha; (PSEA6_1.PE1007).
GN   Name=rpoA; OrderedLocusNames=Patl_1014;
OS   PSEUDOALTEROMONAS ATLANTICA T6C.
OC   Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales;
OC   Pseudoalteromonadaceae; Pseudoalteromonas.
OX   NCBI_TaxID=342610;
RN   [0]
RP   -.;
RG   -.;
RL   -.;
CC   -!- SEQ. DATA ORIGIN: Translated from the HOGENOM CDS PSEA6_1.PE1007.
CC       Pseudoalteromonas atlantica T6c, complete genome.
CC       sequence.
CC   -!- ANNOTATIONS ORIGIN:RPOA_PSEA6
CC   -!- FUNCTION: DNA-dependent RNA polymerase catalyzes the transcription
CC       of DNA into RNA using the four ribonucleoside triphosphates as
CC       substrates.
CC   -!- CATALYTIC ACTIVITY: Nucleoside triphosphate + RNA(n) = diphosphate
CC       + RNA(n+1).
CC   -!- SUBUNIT: Homodimer. The RNAP catalytic core consists of 2 alpha, 1
CC       beta, 1 beta' and 1 omega subunit. When a sigma factor is
CC       associated with the core the holoenzyme is formed, which can
CC       initiate transcription (By similarity).
CC   -!- DOMAIN: The N-terminal domain is essential for RNAP assembly and
CC       basal transcription, whereas the C-terminal domain is involved in
CC       interaction with transcriptional regulators and with upstream
CC       promoter elements (By similarity).
CC   -!- SIMILARITY: Belongs to the RNA polymerase alpha chain family.
CC   -!- GENE_FAMILY: HOG000218481 [ FAMILY / ALN / TREE ]
DR   UniProtKB/Swiss-Prot; Q15X48; -.
DR   EMBL; CP000388; ABG39540.1; -; Genomic_DNA.
DR   RefSeq; YP_660594.1; NC_008228.1.
DR   ProteinModelPortal; Q15X48; -.
DR   SMR; Q15X48; 1-234, 248-328.
DR   STRING; Q15X48; -.
DR   GeneID; 4171990; -.
DR   GenomeReviews; CP000388_GR; Patl_1014.
DR   KEGG; pat:Patl_1014; -.
DR   NMPDR; fig|342610.3.peg.1424; -.
DR   eggNOG; COG0202; -.
DR   OMA; VRSHNCL; -.
DR   PhylomeDB; Q15X48; -.
DR   ProtClustDB; PRK05182; -.
DR   BioCyc; PATL342610:PATL_1014-MON; -.
DR   GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR   GO; GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
DR   GO; GO:0046983; F:protein dimerization activity; IEA:InterPro.
DR   HAMAP; MF_00059; RNApol_bact_RpoA; 1; -.
DR   InterPro; IPR011261; DNA-dir_RNA_pol_dimersation.
DR   InterPro; IPR011262; DNA-dir_RNA_pol_insert.
DR   InterPro; IPR009025; DNA-dir_RNA_pol_RBP11-like.
DR   InterPro; IPR011263; DNA-dir_RNA_pol_RpoA/D/Rpb3.
DR   InterPro; IPR011773; DNA-dir_RpoA.
DR   InterPro; IPR011260; RNAP_asu_C.
DR   Gene3D; G3DSA:2.170.120.12; RNAP_insert; 1.
DR   Pfam; PF01000; RNA_pol_A_bac; 1.
DR   Pfam; PF03118; RNA_pol_A_CTD; 1.
DR   Pfam; PF01193; RNA_pol_L; 1.
DR   ProDom; PD001179; RNAP_asu_C; 1.
DR   SMART; SM00662; RPOLD; 1.
DR   SUPFAM; SSF47789; RNAP_alpha_C; 1.
DR   SUPFAM; SSF56553; RNAP_insert; 1.
DR   SUPFAM; SSF55257; RNAP_RBP11-like; 1.
DR   TIGRFAMs; TIGR02027; RpoA; 1.
DR   HOGENOMDNA; PSEA6_1.PE1007; -.
KW   DNA-directed RNA polymerase subunit alpha;
KW   Complete proteome; DNA-directed RNA polymerase;
KW   Nucleotidyltransferase; Transcription; Transferase.
SQ   SEQUENCE   329 AA;  UNKNOWN MW;  UNKNOWN CRC64;
     MSGSVTEFLK PRLVEIDNVS PTRAKVTLEP LERGFGHTLG NALRRILLSS MPGCAVTEVE
     IDGVLHEYST KEGVQEDVIE ILLNLKGLAV RLEGKTEATL TLVKSGAGPV LAGDIQHDGD
     VEIVNPSHVL CTLTGEAELS MRIKVEMGRG YVPASTRRSS EEDDRPIGRL LVDASFSPVS
     RISYNVESAR VEQRTDLDKL IIDMETNGTI DPEEAIRRSA TILAEQLDAF VELRDMSEPV
     EKEEKPEFDP ILLRPVDDLE LTVRSANCLK AEAIQYIGDL VQRTEVELLK TPNLGKKSLT
     EIKDVLASRG LSLGMRLENW PPESIAEKD
//

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