(data stored in ACNUC24361 zone)

HOGENOM: RAT12_PE165

ID   RAT12_PE165                          STANDARD;      PRT;   406 AA.
AC   RAT12_PE165; Q9Z2K3;
DT   00-JAN-0000 (Rel. 1, Created)
DT   00-JAN-0000 (Rel. 2, Last sequence update)
DT   00-JAN-0000 (Rel. 3, Last annotation update)
DE   Flags: Fragments;
DE   RecName: Full=Zinc finger protein 394;AltName: Full=RLZF-Y;AltName:
DE   Full=Zinc finger protein 94; Short=Zfp-94;AltName: Full=Zinc finger
DE   protein Y1; (RAT12.PE165).
GN   Name=Znf394; Synonyms=Rlzfy, Zfp94, Zfp99;
OS   RATTUS NORVEGICUS.
OC   Eukaryota; Metazoa; Eumetazoa; Bilateria; Coelomata; Deuterostomia;
OC   Chordata; Craniata; Vertebrata; Gnathostomata; Teleostomi; Euteleostomi;
OC   Sarcopterygii; Tetrapoda; Amniota; Mammalia; Theria; Eutheria;
OC   Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae;
OC   Murinae; Rattus.
OX   NCBI_TaxID=10116;
RN   [0]
RP   -.;
RG   -.;
RL   -.;
CC   -!- SEQ. DATA ORIGIN: Translated from the HOGENOM CDS RAT12.PE165.
CC       Rattus norvegicus chromosome 12 RGSC3.4  sequence 1..46782294
CC       annotated by Ensembl
CC   -!- ANNOTATIONS ORIGIN:ZN394_RAT
CC   -!- FUNCTION: May be involved in transcriptional regulation.
CC   -!- SUBCELLULAR LOCATION: Nucleus (Potential).
CC   -!- SIMILARITY: Belongs to the krueppel C2H2-type zinc-finger protein
CC       family.
CC   -!- SIMILARITY: Contains 7 C2H2-type zinc fingers.
CC   -!- SIMILARITY: Contains 1 KRAB domain.
CC   -!- SIMILARITY: Contains 1 SCAN box domain.
CC   -!- GENE_FAMILY: HOG000234619 [ FAMILY / ALN / TREE ]
DR   HOGENOM:Rattus_norvegicus;ENSRNOG00000000983;ENSRNOT00000001302;ENSRNOP00000001302.
DR   EMBL; AF052042; - ;
DR   EMBL; BC100140; - ;
DR   UniProtKB/Swiss-Prot; Q9Z2K3; -.
DR   EMBL; AF052042; AAC78780.1; -; mRNA.
DR   IPI; IPI00209968; -.
DR   RefSeq; NP_663776.1; NM_145724.1.
DR   UniGene; Rn.101891; -.
DR   ProteinModelPortal; Q9Z2K3; -.
DR   SMR; Q9Z2K3; 35-128, 321-518.
DR   STRING; Q9Z2K3; -.
DR   PRIDE; Q9Z2K3; -.
DR   GeneID; 252860; -.
DR   KEGG; rno:252860; -.
DR   UCSC; NM_145724; rat.
DR   CTD; 84124; -.
DR   RGD; 628654; Znf394.
DR   GeneTree; ENSGT00600000084080; -.
DR   InParanoid; Q9Z2K3; -.
DR   OrthoDB; EOG45TCMS; -.
DR   NextBio; 623946; -.
DR   Genevestigator; Q9Z2K3; -.
DR   GermOnline; ENSRNOG00000000983; Rattus norvegicus.
DR   GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR   GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR   GO; GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.
DR   GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR   GO; GO:0016032; P:viral reproduction; IEA:InterPro.
DR   InterPro; IPR001909; Krueppel-associated_box.
DR   InterPro; IPR008916; Retrov_capsid_C.
DR   InterPro; IPR003309; Tscrpt_reg_SCAN.
DR   InterPro; IPR007087; Znf_C2H2.
DR   InterPro; IPR015880; Znf_C2H2-like.
DR   InterPro; IPR013087; Znf_C2H2/integrase_DNA-bd.
DR   Gene3D; G3DSA:3.30.160.60; Znf_C2H2/integrase_DNA-bd; 7.
DR   Pfam; PF01352; KRAB; 1.
DR   Pfam; PF02023; SCAN; 1.
DR   Pfam; PF00096; zf-C2H2; 6.
DR   SMART; SM00349; KRAB; 1.
DR   SMART; SM00431; SCAN; 1.
DR   SMART; SM00355; ZnF_C2H2; 7.
DR   SUPFAM; SSF109640; Krueppel-associated_box; 1.
DR   SUPFAM; SSF47353; Retrov_capsid_C; 1.
DR   PROSITE; PS50805; KRAB; FALSE_NEG.
DR   PROSITE; PS50804; SCAN_BOX; 1.
DR   PROSITE; PS00028; ZINC_FINGER_C2H2_1; 6.
DR   PROSITE; PS50157; ZINC_FINGER_C2H2_2; 7.
DR   HOGENOMDNA; RAT12.PE165; -.
KW   ENSRNOG00000000983820036002503210000011;
KW   Znf394; ZN394_RAT; Q498N6_RAT; AF052042; BC100140;
KW   Complete proteome; DNA-binding; Metal-binding; Nucleus;
KW   Reference proteome; Repeat; Transcription; Transcription regulation;
KW   Zinc; Zinc-finger.
SQ   SEQUENCE   406 AA;  UNKNOWN MW;  UNKNOWN CRC64;
     MAAGSGVAPP PLGVGLCAVK VEEDSPGSQE PSGSGDWQNP ETSRKQFRQL RYQEVAGPEE
     ALSRLWELCR RWLRPELRSK EQIMELLVLE QFLTILPQEL QAYVRDHCPE SGEEAAALAR
     TLQRALDGAS LQSFATFKDV AESLTWEEWE QLAAARKGFC RESTKDPGST VGPGLETKAV
     TTDVILKQEM SKEAESQAWL QEVSQGKVPV FTKCGDTWED WEERLPKAAE LLPLQSSPEE
     QGRTAIPHLL GVSKDESDSK DNEFGNSGSL VLGQHIQTAE GLVTNGECGE DHKQGLHAKC
     HTVKPHSSVD SALGLLESQR HFQEGRPYKC DSCEKRFRQR SDLFKHQRIH TGEKPYMCFV
     CERRFSQSAT LIKHQRTHTG EKPYKCFQCG ERFRQSTHLV RHQRIH
//

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