(data stored in ACNUC25865 zone)

HOVERGEN: RS4Y1_PANTR

ID   RS4Y1_PANTR             Reviewed;         263 AA.
AC   Q861U9;
DT   21-NOV-2003, integrated into UniProtKB/Swiss-Prot.
DT   23-JAN-2007, sequence version 2.
DT   03-NOV-2009, entry version 42.
DE   RecName: Full=40S ribosomal protein S4, Y isoform 1;
GN   Name=RPS4Y1; Synonyms=RPS4Y;
OS   Pan troglodytes (Chimpanzee).
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC   Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
OC   Catarrhini; Hominidae; Pan.
OX   NCBI_TaxID=9598;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RX   MEDLINE=22459821; PubMed=12572605;
RA   Bergen A.W., Pratt M., Mehlman P., Goldman D.;
RT   "Evolution of RPS4Y.";
RL   Mol. Biol. Evol. 15:1412-1419(1998).
RN   [2]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   TISSUE=Testis;
RA   Hughes J.F., Pyntikova T., Skaletsky H., Minx P.J., Rozen S.,
RA   Wilson R.K., Page D.C.;
RT   "The DNA sequence of the chimpanzee Y chromosome.";
RL   Submitted (JUL-2004) to the EMBL/GenBank/DDBJ databases.
CC   -!- MISCELLANEOUS: This isoform is encoded on the Y chromosome.
CC   -!- SIMILARITY: Belongs to the ribosomal protein S4e family.
CC   -!- SIMILARITY: Contains 1 S4 RNA-binding domain.
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CC   -!- GENE_FAMILY: HBG000935 [ FAMILY / ALN / TREE ]
DR   EMBL; AY224222; AAO37287.1; -; Genomic_DNA.
DR   EMBL; AY224217; AAO37287.1; JOINED; Genomic_DNA.
DR   EMBL; AY224218; AAO37287.1; JOINED; Genomic_DNA.
DR   EMBL; AY224219; AAO37287.1; JOINED; Genomic_DNA.
DR   EMBL; AY224220; AAO37287.1; JOINED; Genomic_DNA.
DR   EMBL; AY224221; AAO37287.1; JOINED; Genomic_DNA.
DR   EMBL; AY633110; AAT46347.1; -; mRNA.
DR   RefSeq; NP_001008987.1; -.
DR   STRING; Q861U9; -.
DR   Ensembl; ENSPTRT00000041959; ENSPTRP00000038748; ENSPTRG00000022470; Pan troglodytes.
DR   GeneID; 449509; -.
DR   KEGG; ptr:449509; -.
DR   CTD; 449509; -.
DR   HOVERGEN; Q861U9; -.
DR   OMA; RDKRLAT; -.
DR   GO; GO:0005840; C:ribosome; IEA:UniProtKB-KW.
DR   GO; GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.
DR   GO; GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
DR   GO; GO:0006412; P:translation; IEA:InterPro.
DR   InterPro; IPR005824; KOW.
DR   InterPro; IPR000876; Ribosomal_S4e.
DR   InterPro; IPR013845; Ribosomal_S4e_central.
DR   InterPro; IPR013843; Ribosomal_S4e_N.
DR   InterPro; IPR018199; Ribosomal_S4e_N_CS.
DR   InterPro; IPR002942; S4_RNA_bd.
DR   PANTHER; PTHR11581; Ribosomal_S4E; 1.
DR   Pfam; PF00467; KOW; 1.
DR   Pfam; PF00900; Ribosomal_S4e; 1.
DR   Pfam; PF08071; RS4NT; 1.
DR   Pfam; PF01479; S4; 1.
DR   PIRSF; PIRSF002116; Ribosomal_S4; 1.
DR   ProDom; PD002667; Ribosomal_S4E; 1.
DR   SMART; SM00363; S4; 1.
DR   PROSITE; PS00528; RIBOSOMAL_S4E; 1.
DR   PROSITE; PS50889; S4; 1.
PE   2: Evidence at transcript level;
DR   PRODOM; Q861U9.
DR   SWISS-2DPAGE; Q861U9.
KW   Ribonucleoprotein; Ribosomal protein; RNA-binding; rRNA-binding.
FT   INIT_MET      1      1       Removed (By similarity).
FT   CHAIN         2    263       40S ribosomal protein S4, Y isoform 1.
FT                                /FTId=PRO_0000130816.
FT   DOMAIN       42    104       S4 RNA-binding.
SQ   SEQUENCE   263 AA;  29398 MW;  3B5D6F1ECFCE060A CRC64;
     MARGPKKHLK RVAAPKHWML DKLTGVFAPR PSTGPHKLRE CLPLIVFLRN RLKYALTGDE
     VKKICMQRFI KIDGKVRVDV TYPAGFMDVI SIEKTGEHFR LVYDTKGRFA VHRITVEEAK
     YKLCKVRKIT VGVKGIPHLV THDARTIRYP DPVIKVNDTV QIDLGTGKII NFIKFDTGNL
     CMVIGGANLG RVGVITNRER HPGSFDVVHV KDANGNSFAT RLSNIFVIGN GNKPWISLPR
     GKGIRLTVAA ERDKRLATKQ SSG
//

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