(data stored in SCRATCH zone)

HOGENOM: SHEFN_1_PE1000

ID   SHEFN_1_PE1000                       STANDARD;      PRT;   459 AA.
AC   SHEFN_1_PE1000; Q086F2;
DT   00-JAN-0000 (Rel. 1, Created)
DT   00-JAN-0000 (Rel. 2, Last sequence update)
DT   00-JAN-0000 (Rel. 3, Last annotation update)
DE   RecName: Full=DNA repair protein radA; (SHEFN_1.PE1000).
GN   OrderedLocusNames=Sfri_1010;
OS   SHEWANELLA FRIGIDIMARINA NCIMB 400.
OC   Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales;
OC   Shewanellaceae; Shewanella.
OX   NCBI_TaxID=318167;
RN   [0]
RP   -.;
RG   -.;
RL   -.;
CC   -!- SEQ. DATA ORIGIN: Translated from the HOGENOM CDS SHEFN_1.PE1000.
CC       Shewanella frigidimarina NCIMB 400, complete genome.
CC       annotated by Ensembl Genomes
CC   -!- ANNOTATIONS ORIGIN:Q086F2_SHEFN
CC   -!- FUNCTION: May play a role in the repair of endogenous alkylation
CC       damage (By similarity).
CC   -!- SIMILARITY: Belongs to the RecA family. RadA subfamily.
CC   -!- GENE_FAMILY: HOG000218329 [ FAMILY / ALN / TREE ]
DR   UniProtKB/Swiss-Prot; Q086F2; -.
DR   EMBL; CP000447; ABI70863.1; -; Genomic_DNA.
DR   RefSeq; YP_749701.1; NC_008345.1.
DR   ProteinModelPortal; Q086F2; -.
DR   STRING; Q086F2; -.
DR   GeneID; 4277125; -.
DR   GenomeReviews; CP000447_GR; Sfri_1010.
DR   KEGG; sfr:Sfri_1010; -.
DR   NMPDR; fig|318167.10.peg.962; -.
DR   eggNOG; COG1066; -.
DR   OMA; IGVFEMT; -.
DR   PhylomeDB; Q086F2; -.
DR   ProtClustDB; PRK11823; -.
DR   GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR   GO; GO:0004176; F:ATP-dependent peptidase activity; IEA:InterPro.
DR   GO; GO:0003684; F:damaged DNA binding; IEA:InterPro.
DR   GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR   GO; GO:0004252; F:serine-type endopeptidase activity; IEA:InterPro.
DR   GO; GO:0006281; P:DNA repair; IEA:UniProtKB-KW.
DR   GO; GO:0006508; P:proteolysis; IEA:InterPro.
DR   InterPro; IPR003593; ATPase_AAA+_core.
DR   InterPro; IPR014774; Circ_KaiC/RadA.
DR   InterPro; IPR004504; DNA_repair_RadA.
DR   InterPro; IPR008269; Pept_S16_C.
DR   InterPro; IPR020568; Ribosomal_S5_D2-typ_fold.
DR   Pfam; PF06745; KaiC; 1.
DR   Pfam; PF05362; Lon_C; 1.
DR   PRINTS; PR01874; DNAREPAIRADA.
DR   SMART; SM00382; AAA; 1.
DR   SUPFAM; SSF54211; Ribosomal_S5_D2-typ_fold; 1.
DR   TIGRFAMs; TIGR00416; Sms; 1.
DR   HOGENOMDNA; SHEFN_1.PE1000; -.
KW   DNA repair protein RadA;
KW   ATP-binding; Complete proteome; DNA damage; DNA repair; DNA-binding;
KW   Metal-binding; Nucleotide-binding; Zinc; Zinc-finger.
SQ   SEQUENCE   459 AA;  UNKNOWN MW;  UNKNOWN CRC64;
     MAKAPKMAFV CDDCGLDYPR WQGQCRCGAW NSLVEMKLSA SKSSTSRSSV LGYAGAVGGG
     SKKLSEVESE DAEKRLTEIG ELDRVLSGGL TTGSVNIISG DPGAGKTTLL SDLVARMSQS
     MASLYCTAEE SLSQFKNRVN RLKLNYNEDN LFLLSETSVE AIIEELEAKQ IKFAVIDSIQ
     AVVTDAANGS PGSPSQVKTA AQAFTQYCKK NNVTMFIIAH VNKNNEIAGP QTLVHIVDSL
     LHIDTNDGQI RTLRANKNRF GDVDTVGIFR MSERGMISVD NPSEIFLSGS TTESPGSTIT
     CIRKGNRNLL LEIQCLTTET ESEFPQRVCV GLNMNRIKML TGILRKHTKT KIFHDTFFNI
     VGGLKIDESE TCIDLALVTA LLSSLNDFVV PRTTCIMGEL SLNGDVRPID SGVPRVKEAA
     QHGFTEIFIP FRNYHKTMEG LGAKIIPVKT IHELLELIN
//

If you have problems or comments...

PBIL Back to PBIL home page