(data stored in ACNUC5340 zone)

HOGENOM: SORBI_3_PE2409

ID   SORBI_3_PE2409                       STANDARD;      PRT;   103 AA.
AC   SORBI_3_PE2409; C5WTL6;
DT   00-JAN-0000 (Rel. 1, Created)
DT   00-JAN-0000 (Rel. 2, Last sequence update)
DT   00-JAN-0000 (Rel. 3, Last annotation update)
DE   Flags: Fragments;
DE   RecName: Full=Histone H4; (SORBI_3.PE2409).
GN   Name=Sb01g030460; Synonyms=Sb01g049250, Sb02g025440, Sb02g032240,
OS   SORGHUM BICOLOR.
OC   Eukaryota; Viridiplantae; Streptophyta; Liliopsida; commelinids; Poales;
OC   Poaceae; Panicoideae; Andropogoneae; Sorghum.
OX   NCBI_TaxID=4558;
RN   [0]
RP   -.;
RG   -.;
RL   -.;
CC   -!- SEQ. DATA ORIGIN: Translated from the HOGENOM CDS SORBI_3.PE2409.
CC       Sorghum bicolor chromosome 2 Sbi1 full sequence 1..77932606 annotated b
CC       Ensembl Genomes
CC   -!- ANNOTATIONS ORIGIN:C5WTL6_SORBI
CC   -!- FUNCTION: Core component of nucleosome. Nucleosomes wrap and
CC       compact DNA into chromatin, limiting DNA accessibility to the
CC       cellular machineries which require DNA as a template. Histones
CC       thereby play a central role in transcription regulation, DNA
CC       repair, DNA replication and chromosomal stability. DNA
CC       accessibility is regulated via a complex set of post-translational
CC       modifications of histones, also called histone code, and
CC       nucleosome remodeling (By similarity).
CC   -!- SUBUNIT: The nucleosome is a histone octamer containing two
CC       molecules each of H2A, H2B, H3 and H4 assembled in one H3-H4
CC       heterotetramer and two H2A-H2B heterodimers. The octamer wraps
CC       approximately 147 bp of DNA (By similarity).
CC   -!- SIMILARITY: Belongs to the histone H4 family.
CC   -!- GENE_FAMILY: HOG000234654 [ FAMILY / ALN / TREE ]
DR   HOGENOM:Sorghum_bicolor;SB02G025440;SB02G025440.1;SB02G025440.1.
DR   EMBL; CM000760; - ;
DR   EMBL; CM000761; - ;
DR   EMBL; CM000762; - ;
DR   EMBL; CM000763; - ;
DR   EMBL; CM000765; - ;
DR   EMBL; CM000768; - ;
DR   UniProtKB/Swiss-Prot; C5WTL6; -.
DR   EMBL; CM000760; EER92010.1; -; Genomic_DNA.
DR   EMBL; CM000760; EER95622.1; -; Genomic_DNA.
DR   EMBL; CM000761; EER96771.1; -; Genomic_DNA.
DR   EMBL; CM000761; EER99324.1; -; Genomic_DNA.
DR   EMBL; CM000762; EES00250.1; -; Genomic_DNA.
DR   EMBL; CM000762; EES00251.1; -; Genomic_DNA.
DR   EMBL; CM000762; EES01716.1; -; Genomic_DNA.
DR   EMBL; CM000762; EES02406.1; -; Genomic_DNA.
DR   EMBL; CM000763; EES05719.1; -; Genomic_DNA.
DR   EMBL; CM000765; EES12723.1; -; Genomic_DNA.
DR   EMBL; CM000768; EES18362.1; -; Genomic_DNA.
DR   RefSeq; XP_002439932.1; XM_002439887.1.
DR   RefSeq; XP_002448395.1; XM_002448350.1.
DR   RefSeq; XP_002452743.1; XM_002452698.1.
DR   RefSeq; XP_002455130.1; XM_002455085.1.
DR   RefSeq; XP_002455131.1; XM_002455086.1.
DR   RefSeq; XP_002456596.1; XM_002456551.1.
DR   RefSeq; XP_002457286.1; XM_002457241.1.
DR   RefSeq; XP_002460250.1; XM_002460205.1.
DR   RefSeq; XP_002462803.1; XM_002462758.1.
DR   RefSeq; XP_002465012.1; XM_002464967.1.
DR   RefSeq; XP_002468624.1; XM_002468579.1.
DR   UniGene; Sbi.18162; -.
DR   UniGene; Sbi.18222; -.
DR   UniGene; Sbi.20500; -.
DR   UniGene; Sbi.20741; -.
DR   UniGene; Sbi.21301; -.
DR   UniGene; Sbi.21524; -.
DR   UniGene; Sbi.21595; -.
DR   ProteinModelPortal; C5WTL6; -.
DR   SMR; C5WTL6; 9-103.
DR   PRIDE; C5WTL6; -.
DR   EnsemblPlants; Sb01g030460.1; Sb01g030460.1; Sb01g030460.
DR   EnsemblPlants; Sb01g049250.1; Sb01g049250.1; Sb01g049250.
DR   EnsemblPlants; Sb02g025440.1; Sb02g025440.1; Sb02g025440.
DR   EnsemblPlants; Sb02g032240.1; Sb02g032240.1; Sb02g032240.
DR   EnsemblPlants; Sb03g004840.1; Sb03g004840.1; Sb03g004840.
DR   EnsemblPlants; Sb03g004870.1; Sb03g004870.1; Sb03g004870.
DR   EnsemblPlants; Sb03g004890.1; Sb03g004890.1; Sb03g004890.
DR   EnsemblPlants; Sb03g039090.1; Sb03g039090.1; Sb03g039090.
DR   EnsemblPlants; Sb04g031620.1; Sb04g031620.1; Sb04g031620.
DR   EnsemblPlants; Sb06g026490.1; Sb06g026490.1; Sb06g026490.
DR   EnsemblPlants; Sb09g022920.1; Sb09g022920.1; Sb09g022920.
DR   GeneID; 8056567; -.
DR   GeneID; 8056569; -.
DR   GeneID; 8058810; -.
DR   GeneID; 8060296; -.
DR   GeneID; 8060440; -.
DR   GeneID; 8061791; -.
DR   GeneID; 8073205; -.
DR   GeneID; 8074181; -.
DR   GeneID; 8077977; -.
DR   GeneID; 8078508; -.
DR   GeneID; 8085439; -.
DR   KEGG; sbi:SORBI_01g030460; -.
DR   KEGG; sbi:SORBI_01g049250; -.
DR   KEGG; sbi:SORBI_02g025440; -.
DR   KEGG; sbi:SORBI_02g032240; -.
DR   KEGG; sbi:SORBI_03g004840; -.
DR   KEGG; sbi:SORBI_03g004870; -.
DR   KEGG; sbi:SORBI_03g004890; -.
DR   KEGG; sbi:SORBI_03g039090; -.
DR   KEGG; sbi:SORBI_04g031620; -.
DR   KEGG; sbi:SORBI_06g026490; -.
DR   KEGG; sbi:SORBI_09g022920; -.
DR   GeneTree; EPGT00050000011901; -.
DR   GeneTree; EPGT00070000028895; -.
DR   ProtClustDB; PLN00035; -.
DR   GO; GO:0000786; C:nucleosome; IEA:UniProtKB-KW.
DR   GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW.
DR   GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR   GO; GO:0006334; P:nucleosome assembly; IEA:InterPro.
DR   InterPro; IPR009072; Histone-fold.
DR   InterPro; IPR007125; Histone_core_D.
DR   InterPro; IPR001951; Histone_H4.
DR   InterPro; IPR019809; Histone_H4_CS.
DR   Gene3D; G3DSA:1.10.20.10; Histone-fold; 1.
DR   PANTHER; PTHR10484; Histone_H4; 1.
DR   Pfam; PF00125; Histone; 1.
DR   PRINTS; PR00623; HISTONEH4.
DR   SMART; SM00417; H4; 1.
DR   SUPFAM; SSF47113; Histone-fold; 1.
DR   PROSITE; PS00047; HISTONE_H4; 1.
DR   HOGENOMDNA; SORBI_3.PE2409; -.
KW   Sb02g0254401005433820036002503210000011;
KW   CM000760; CM000761; CM000762; CM000763; CM000765; CM000768; C5WTL6;
KW   Chromosome; Complete proteome; DNA-binding; Nucleosome core; Nucleus;
KW   Reference proteome.
SQ   SEQUENCE   103 AA;  UNKNOWN MW;  UNKNOWN CRC64;
     MSGRGKGGKG LGKGGAKRHR KVLRDNIQGI TKPAIRRLAR RGGVKRISGL IYEETRGVLK
     IFLENVIRDA VTYTEHARRK TVTAMDVVYA LKRQGRTLYG FGG
//

If you have problems or comments...

PBIL Back to PBIL home page