(data stored in ACNUC9543 zone)

HOGENOM: SORBI_5_PE1948

ID   SORBI_5_PE1948                       STANDARD;      PRT;   1088 AA.
AC   SORBI_5_PE1948; C5XU69;
DT   00-JAN-0000 (Rel. 1, Created)
DT   00-JAN-0000 (Rel. 2, Last sequence update)
DT   00-JAN-0000 (Rel. 3, Last annotation update)
DE   Flags: Fragments;
DE   SubName: Full=Putative uncharacterized protein Sb04g022460;
DE   (SORBI_5.PE1948).
GN   Name=Sb04g022460; ORFNames=SORBIDRAFT_04g022460;
OS   SORGHUM BICOLOR.
OC   Eukaryota; Viridiplantae; Streptophyta; Liliopsida; commelinids; Poales;
OC   Poaceae; Panicoideae; Andropogoneae; Sorghum.
OX   NCBI_TaxID=4558;
RN   [0]
RP   -.;
RG   -.;
RL   -.;
CC   -!- SEQ. DATA ORIGIN: Translated from the HOGENOM CDS SORBI_5.PE1948.
CC       Sorghum bicolor chromosome 4 Sbi1 full sequence 1..68034345 annotated b
CC       Ensembl Genomes
CC   -!- ANNOTATIONS ORIGIN:C5XU69_SORBI
CC   -!- SIMILARITY: Contains 1 helicase ATP-binding domain.
CC   -!- SIMILARITY: Contains 1 helicase C-terminal domain.
CC   -!- GENE_FAMILY: HOG000175261 [ FAMILY / ALN / TREE ]
DR   HOGENOM:Sorghum_bicolor;SB04G022460;SB04G022460.1;SB04G022460.1.
DR   EMBL; CM000763; - ;
DR   UniProtKB/Swiss-Prot; C5XU69; -.
DR   EMBL; CM000763; EES06947.1; -; Genomic_DNA.
DR   RefSeq; XP_002453971.1; XM_002453926.1.
DR   EnsemblPlants; Sb04g022460.1; Sb04g022460.1; Sb04g022460.
DR   GeneID; 8064256; -.
DR   KEGG; sbi:SORBI_04g022460; -.
DR   GeneTree; EPGT00070000028249; -.
DR   ProtClustDB; CLSN2685836; -.
DR   GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR   GO; GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.
DR   GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR   InterPro; IPR014001; DEAD-like_helicase.
DR   InterPro; IPR011545; DNA/RNA_helicase_DEAD/DEAH_N.
DR   InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS.
DR   InterPro; IPR011709; DUF1605.
DR   InterPro; IPR007502; Helicase-assoc_dom.
DR   InterPro; IPR001650; Helicase_C.
DR   Pfam; PF00270; DEAD; 1.
DR   Pfam; PF04408; HA2; 1.
DR   Pfam; PF00271; Helicase_C; 1.
DR   Pfam; PF07717; OB_NTP_bind; 1.
DR   SMART; SM00487; DEXDc; 1.
DR   SMART; SM00847; HA2; 1.
DR   SMART; SM00490; HELICc; 1.
DR   PROSITE; PS00690; DEAH_ATP_HELICASE; 1.
DR   PROSITE; PS51192; HELICASE_ATP_BIND_1; 1.
DR   PROSITE; PS51194; HELICASE_CTER; 1.
DR   HOGENOMDNA; SORBI_5.PE1948; -.
KW   Sb04g0224601005433820036002503210000011;
KW   CM000763; C5XU69;
KW   ATP-binding; Complete proteome; Helicase; Hydrolase;
KW   Nucleotide-binding; Reference proteome.
SQ   SEQUENCE   1088 AA;  UNKNOWN MW;  UNKNOWN CRC64;
     MASDGQLREW VSDKLMSLLG YSKNVVVQYV IRLAKECSST GDLVSKLVEF GFTSSAETRT
     FASDVYAKVP RRASGISNYQ KQEREAAKLV QKQSTYKLLA DEDDNTDNQT PTSQKTSTNP
     SSKSRKHFRR KADQDSGDDE IVAKDSGRNV RRRTEEEDEE GGDSSSDDEK ERIRDQQEKA
     QLERNMRERD AANTRKEYHL VSNISKFWKH FCFFELCLMK LCFSPHSAIC GSDISLELRS
     LTEELTRRSQ AMDKNDTSDL RKFSRQAYLQ KRRDKKIEEI RDEILDHQYI FQDVKLTEAE
     EKELSYKMKL YGLVKEHVET PDDVGEYKMP EAYDMGENVN QEKRFSVAMQ RYKDPEAKDK
     MNPFAEQEAW EEHQIGKSKL RFGSKDKKTS SDEYQYVFED TIDFVKSSVI EGTQPEDDSD
     KEDVEAKDIL KRELQDERKT LPIFKFRDEL LKAVEEYQVI VIVGETGSGK TTQIPQYLHE
     AGYTAKGKVA CTQPRRVAAM SVAARVSQEM GVKLGHEVGY SIRFEDCTSD KTIIKYMTDG
     MLLREFLGEP DLASYSVVMV DEAHERTLST DILFGLVKDI SRFRPDLKLL ISSATLDAEK
     FSDYFDSAPI FKIPGRRYPV EIHYTKAPEA DYIDAAIVTV LQIHVTQPPG DILVFLTGQE
     EIETVDEILK HRTRGLGTKI SELIICPIYA NLPTELQAKI FEPTPEGARK VVLATNIAET
     SLTIDGIKYV IDPGFCKIKS YNPRTGMESL LINPISKASA NQRAGRSGRT GPGKCFRLYT
     SYNYMHDLED NTVPEIQRTN LANVVLTLKS LGIHDLVNFD FMDPPPSEAL LRALEQLFAL
     SALNSRGELT KTGRRMAEFP LDPMLSKMIV ASEKYKCSDE VISIASMLSI GNSIFYRPKD
     KQVHADNARL NFHTGNVGDH IALLNVFTCS YLLSSGLISW PEFLLSDQPV NVLFYYLFFI
     FSQKVRSMKR ARDIRDQLEG LMERVEIEIC SNASDLDAIK KAITSGFFHH SARLQRDGTY
     KTVKNPQTIR PRWVVYHELV LTTKEFMRQV TELKPEWLVE IAPHYYQLKD VEDSGTKKLP
     KGQGRAAL
//

If you have problems or comments...

PBIL Back to PBIL home page