(data stored in ACNUC9543 zone)

HOGENOM: THAPS_1_PE654

ID   THAPS_1_PE654                        STANDARD;      PRT;   1191 AA.
AC   THAPS_1_PE654; B8BR58;
DT   00-JAN-0000 (Rel. 1, Created)
DT   00-JAN-0000 (Rel. 2, Last sequence update)
DT   00-JAN-0000 (Rel. 3, Last annotation update)
DE   SubName: Full=ATP dependent RNA helicase; (THAPS_1.PE654).
GN   Name=ATH1; ORFNames=THAPSDRAFT_268049;
OS   THALASSIOSIRA PSEUDONANA.
OC   Eukaryota; Stramenopiles; Bacillariophyta; Coscinodiscophyceae;
OC   Thalassiosirophycidae; Thalassiosirales; Thalassiosiraceae; Thalassiosira.
OX   NCBI_TaxID=35128;
RN   [0]
RP   -.;
RG   -.;
RL   -.;
CC   -!- SEQ. DATA ORIGIN: Translated from the HOGENOM CDS THAPS_1.PE654.
CC       Thalassiosira pseudonana chromosome 1 Thaps3 full sequence 1..3042585
CC       annotated by Ensembl Genomes
CC   -!- ANNOTATIONS ORIGIN:B8BR58_THAPS
CC   -!- SIMILARITY: Contains 1 helicase ATP-binding domain.
CC   -!- SIMILARITY: Contains 1 helicase C-terminal domain.
CC   -!- GENE_FAMILY: HOG000175261 [ FAMILY / ALN / TREE ]
DR   HOGENOM:Thalassiosira_pseudonana;THAPS268049;THAPS268049;THAPS268049.
DR   EMBL; CM000638; - ;
DR   UniProtKB/Swiss-Prot; B8BR58; -.
DR   EMBL; CM000638; EED95910.1; -; Genomic_DNA.
DR   RefSeq; XP_002286269.1; XM_002286233.1.
DR   ProteinModelPortal; B8BR58; -.
DR   GeneID; 7445157; -.
DR   KEGG; tps:THAPSDRAFT_268049; -.
DR   GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR   GO; GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.
DR   GO; GO:0003723; F:RNA binding; IEA:InterPro.
DR   InterPro; IPR003593; ATPase_AAA+_core.
DR   InterPro; IPR014001; DEAD-like_helicase.
DR   InterPro; IPR011545; DNA/RNA_helicase_DEAD/DEAH_N.
DR   InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS.
DR   InterPro; IPR011709; DUF1605.
DR   InterPro; IPR007502; Helicase-assoc_dom.
DR   InterPro; IPR001650; Helicase_C.
DR   InterPro; IPR012340; NA-bd_OB-fold.
DR   InterPro; IPR016027; NA-bd_OB-fold-like.
DR   InterPro; IPR003029; Rbsml_prot_S1_RNA-bd_dom.
DR   InterPro; IPR022967; RNA-binding_domain_S1.
DR   Gene3D; G3DSA:2.40.50.140; OB_NA_bd_sub; 1.
DR   Pfam; PF00270; DEAD; 1.
DR   Pfam; PF04408; HA2; 1.
DR   Pfam; PF00271; Helicase_C; 1.
DR   Pfam; PF07717; OB_NTP_bind; 1.
DR   Pfam; PF00575; S1; 1.
DR   SMART; SM00382; AAA; 1.
DR   SMART; SM00487; DEXDc; 1.
DR   SMART; SM00847; HA2; 1.
DR   SMART; SM00490; HELICc; 1.
DR   SMART; SM00316; S1; 1.
DR   SUPFAM; SSF50249; Nucleic_acid_OB; 1.
DR   PROSITE; PS00690; DEAH_ATP_HELICASE; 1.
DR   PROSITE; PS51192; HELICASE_ATP_BIND_1; 1.
DR   PROSITE; PS51194; HELICASE_CTER; 1.
DR   PROSITE; PS50126; S1; 1.
DR   HOGENOMDNA; THAPS_1.PE654; -.
KW   Thaps2680490019671820036002503210000011;
KW   B8BR58; CM000638;
KW   ATP-binding; Complete proteome; Helicase; Hydrolase;
KW   Nucleotide-binding; Reference proteome.
SQ   SEQUENCE   1191 AA;  UNKNOWN MW;  UNKNOWN CRC64;
     MAPPLPNADG TTTSTKKKKK NTEDEPPLTA VERLQSLNLV SRVASEWNNH LGISDRTLAE
     FVINLAEKRI KSFLKDEFVK EDGSLYNVAL TDGSSDKIRV ALMDDKKKVK RAKSQKQQRG
     DGLEVPLEQG FYEHDKDTNG DGDMSNVHQR SRNKRRWDDN DAKDGNGEPK DSGKRAMSNL
     PAWMTQKSDE EKKSADVRET SQRSKSNLPA WMTKQQSGGA KDGLQLYQIF RGTVQRVLDF
     GIVVDFNVPG NSEKASGMVH LTHVTKNRIE KPKDAGFRPG QSVYVKLISI GKRGASAGAG
     EGGLMLSLKD VDQSSGKDLM PHRSAAAMGT GDYSSKSDTA SNTAASASAA VEEEADNITQ
     RQLQGLTEQE LFEAQQLIRS GVLPVEQYPT FDNEGGLGML AQETTEEQTE VELADFEPSF
     LRGQTRRSGR DLEPIRIVKN PDGSLQRAAM QQGTLAKERR ELRQAQANQL VDSIPKDLNR
     PWEDPLPEAG ERHFAQELRS INMSAFDGAP EWKQKAESKT LSYGIISNRS IKDQRESLPI
     YRLKPELMRA MSENQVLVVI GETGSGKTTQ MTQYMHELGI TKNGMIGCTQ PRRVAAVSVA
     KRVSEEFGCT LGEEVGYSIR FDDATSKETI IKYMTDGMLM REYLADNDLK RYGALMLDEA
     HERTIHTDVL FGLLKDLMRR RPDMKLIVTS ATLDAEKFSS YFFECPIFTI PGRTFPVEIL
     YTKEPESDYL DAALITIMQI HLSEPAGDIL LFLTGQEEID TACETLFSRM KALGDLAPEL
     IILPVYSSLP SEMQSRIFEP APPGTRKCIV ATNIAEASLT IDGIYYVVDP GFSKQKAFNA
     KLGMDSLVVT PISQASARQR AGRAGRTGPG KCYRLYTEMA YRNEMLPTNI PEIQRTNLGN
     VVLQLKAMGI NDLLGFDFMD PPPVATLVGA MEGLNALGAL DDEGLLTRLG RKMAEFPLEP
     NLSKMLLLSV DLGCSDEILT ITSLLSVDNP FYRPRDKQGQ ADMKKAKFHQ AEGDHLTLLA
     VYKAWEASKF SNPWCFENFI QARSMKRAQD VRKQLVTIMD RYKLDILSSG KNYKKICMAI
     TAGFFTNAAK KHPQEGYLTL VDQNPVYIHP SSAVFNKNPE WVIYHELVLT TKEYMRNVMV
     IDAKWLIELA PSFYKKADPN KMTKSKRMEK IEPLFDRFNP KDSWRLSRRK G
//

If you have problems or comments...

PBIL Back to PBIL home page