(data stored in ACNUC8465 zone)

HOGENOM: UNCTG_1_PE108

ID   UNCTG_1_PE108                        STANDARD;      PRT;   208 AA.
AC   UNCTG_1_PE108; B1GZA9;
DT   00-JAN-0000 (Rel. 1, Created)
DT   00-JAN-0000 (Rel. 2, Last sequence update)
DT   00-JAN-0000 (Rel. 3, Last annotation update)
DE   RecName: Full=30S ribosomal protein S4; (UNCTG_1.PE108).
GN   Name=rpsD; OrderedLocusNames=TGRD_108;
OS   UNCULTURED TERMITE GROUP 1 BACTERIUM PHYLOTYPE RS-D17.
OC   Bacteria; Elusimicrobia; environmental samples.
OX   NCBI_TaxID=471821;
RN   [0]
RP   -.;
RG   -.;
RL   -.;
CC   -!- SEQ. DATA ORIGIN: Translated from the HOGENOM CDS UNCTG_1.PE108.
CC       Uncultured Termite group 1 bacterium phylotype Rs-D17, complete genome.
CC       1..870428 annotated by Ensembl
CC   -!- ANNOTATIONS ORIGIN:RS4_UNCTG
CC   -!- FUNCTION: One of the primary rRNA binding proteins, it binds
CC       directly to 16S rRNA where it nucleates assembly of the body of
CC       the 30S subunit (By similarity).
CC   -!- FUNCTION: With S5 and S12 plays an important role in translational
CC       accuracy (By similarity).
CC   -!- SUBUNIT: Part of the 30S ribosomal subunit. Contacts protein S5.
CC       The interaction surface between S4 and S5 is involved in control
CC       of translational fidelity (By similarity).
CC   -!- SIMILARITY: Belongs to the ribosomal protein S4P family.
CC   -!- SIMILARITY: Contains 1 S4 RNA-binding domain.
CC   -!- GENE_FAMILY: HOG000221003 [ FAMILY / ALN / TREE ]
DR   UniProtKB/Swiss-Prot; B1GZA9; -.
DR   EMBL; AP009510; BAG13591.1; -; Genomic_DNA.
DR   RefSeq; YP_001956052.1; NS_000191.1.
DR   ProteinModelPortal; B1GZA9; -.
DR   STRING; B1GZA9; -.
DR   GeneID; 6372780; -.
DR   GenomeReviews; AP009510_GR; TGRD_108.
DR   KEGG; rsd:TGRD_108; -.
DR   OMA; QLVVELY; -.
DR   GO; GO:0015935; C:small ribosomal subunit; IEA:InterPro.
DR   GO; GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.
DR   GO; GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
DR   GO; GO:0006412; P:translation; IEA:InterPro.
DR   HAMAP; MF_01306_B; Ribosomal_S4_B; 1; -.
DR   InterPro; IPR022801; Ribosomal_S4/S9.
DR   InterPro; IPR001912; Ribosomal_S4/S9_N.
DR   InterPro; IPR005709; Ribosomal_S4_bac-type.
DR   InterPro; IPR018079; Ribosomal_S4_CS.
DR   InterPro; IPR002942; S4_RNA-bd.
DR   Gene3D; G3DSA:1.10.1050.10; G3DSA:1.10.1050.10; 1.
DR   Gene3D; G3DSA:3.10.290.10; G3DSA:3.10.290.10; 1.
DR   PANTHER; PTHR11831; Ribosomal_S4; 1.
DR   Pfam; PF00163; Ribosomal_S4; 1.
DR   Pfam; PF01479; S4; 1.
DR   SMART; SM00363; S4; 1.
DR   TIGRFAMs; TIGR01017; RpsD_bact; 1.
DR   PROSITE; PS00632; RIBOSOMAL_S4; 1.
DR   PROSITE; PS50889; S4; 1.
DR   HOGENOMDNA; UNCTG_1.PE108; -.
KW   30S ribosomal protein S4;
KW   Complete proteome; Ribonucleoprotein; Ribosomal protein; RNA-binding;
KW   rRNA-binding.
SQ   SEQUENCE   208 AA;  UNKNOWN MW;  UNKNOWN CRC64;
     MSRYLGSVCK LCRREKEKLF LKGERCSSNC ALNRKRGKNS PGQHGASKVK MSDYAKHLRE
     KQKARRMYGL TEEQFSNYYK TAEKMKGSAG DNLLKLLELR LDNVVYRLGL ASSKKMARQI
     VNHGNILVNE KKIDVPRYRL KIGDVITFPE KYKSNVIIKK LIEKMVSSIP AWLSFDKSRI
     AGTVVSEPLA GETSHPINSQ LIVEYYSK
//

If you have problems or comments...

PBIL Back to PBIL home page