Page 1 - Database is HOGENOM

Sequence list "list":
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1. ARATH_1_PE8089  RecName: Full=Pumilio homolog 23; Short=APUM-23; Short=AtPUM23;
           (ARATH_1.PE8089).
           Keywords: AT1G72320pg.C_scaffold_1320000031; AT1G72320.1.C_scaffold_1320000031;
           Keywords: AC016529; AC067754; AY035041; AY051073; BX815356;
           Keywords: Alternative splicing; Complete proteome; Nucleus; Reference proteome;
           Keywords: Repeat; RNA-binding; Translation regulation.
           Organism: ARABIDOPSIS THALIANA                                                  

2. ARATH_2_PE4768  RecName: Full=Multiprotein-bridging factor 1a; (ARATH_2.PE4768).
           Keywords: AT2G42680pg.C_scaffold_1320000031; AT2G42680.1.C_scaffold_1320000031;
           Keywords: AC006931; AC007087; AF370280; AY063014; AY088140;
           Keywords: Activator; Complete proteome; DNA-binding; Nucleus;
           Keywords: Reference proteome; Transcription; Transcription regulation.
           Organism: ARABIDOPSIS THALIANA                                                  

3. ARATH_3_PE2276  RecName: Full=Pumilio homolog 24; Short=APUM-24; Short=AtPUM24;
           (ARATH_3.PE2276).
           Keywords: AT3G16810pg.C_scaffold_1320000031; AT3G16810.1.C_scaffold_1320000031;
           Keywords: AB028608; AY045638;
           Keywords: Complete proteome; Nucleus; Reference proteome; Repeat; RNA-binding;
           Keywords: Translation regulation.
           Organism: ARABIDOPSIS THALIANA                                                  

4. ARATH_3_PE4250  RecName: Full=Endoribonuclease Dicer homolog 3; EC=3.1.26 -;AltName:
           Full=Dicer-like protein 3; Short=AtDCL3; (ARATH_3.PE4250).
           Keywords: AT3G43920pg.C_scaffold_1320000031; AT3G43920.1.C_scaffold_1320000031;
           Keywords: AL163975; DQ479972;
           Keywords: Alternative splicing; ATP-binding; Complete proteome; Endonuclease;
           Keywords: Helicase; Hydrolase; Magnesium; Manganese; Metal-binding; Nuclease;
           Keywords: Nucleotide-binding; Nucleus; Plant defense; Reference proteome;
           Keywords: Repeat; RNA-binding; RNA-mediated gene silencing.
           Organism: ARABIDOPSIS THALIANA                                                  

5. ARATH_3_PE4352  RecName: Full=Histone deacetylase HDT1;AltName: Full=HD-tuins protein
           1;AltName: Full=Histone deacetylase 2a; (ARATH_3.PE4352).
           Keywords: AT3G44750pg.C_scaffold_1320000031; AT3G44750.1.C_scaffold_1320000031;
           Keywords: AC002534; AF195545; AY065396; AY096729;
           Keywords: Alternative splicing; Chromatin regulator; Complete proteome;
           Keywords: Developmental protein; Hydrolase; Metal-binding; Nucleus;
           Keywords: Phosphoprotein; Reference proteome; Repressor; Transcription;
           Keywords: Transcription regulation; Zinc; Zinc-finger.
           Organism: ARABIDOPSIS THALIANA                                                  

6. ARATH_3_PE6224  RecName: Full=Multiprotein-bridging factor 1b; (ARATH_3.PE6224).
           Keywords: AT3G58680pg.C_scaffold_1320000031; AT3G58680.1.C_scaffold_1320000031;
           Keywords: AF324717; AF326909; AF339728; AL353032; AY042850; AY081487; AY084597;
           Keywords: Activator; Complete proteome; DNA-binding; Nucleus;
           Keywords: Reference proteome; Transcription; Transcription regulation.
           Organism: ARABIDOPSIS THALIANA                                                  

7. ARATH_5_PE2777  RecName: Full=Histone deacetylase HDT2;AltName: Full=HD-tuins protein
           2;AltName: Full=Histone deacetylase 2b; (ARATH_5.PE2777).
           Keywords: AT5G22650pg.C_scaffold_1320000031; AT5G22650.10C_scaffold_1320000031;
           Keywords: AB006699; AF044914; AF195546; AK222066; AY059893; AY079014; AY122890;
           Keywords: Alternative splicing; Chromatin regulator; Complete proteome;
           Keywords: Developmental protein; Hydrolase; Nucleus; Phosphoprotein;
           Keywords: Reference proteome; Repressor; Transcription;
           Keywords: Transcription regulation.
           Organism: ARABIDOPSIS THALIANA                                                  

8. ARATH_5_PE368  RecName: Full=Histone deacetylase HDT3;AltName: Full=HD-tuins protein
           3;AltName: Full=Histone deacetylase 2c; (ARATH_5.PE368).
           Keywords: AT5G03740pg.C_scaffold_1320000031; AT5G03740.10C_scaffold_1320000031;
           Keywords: AB005235; AF255712; AF372889; AF510168; AL162506; AY142039;
           Keywords: Chromatin regulator; Complete proteome; Developmental protein;
           Keywords: Hydrolase; Metal-binding; Nucleus; Reference proteome; Repressor;
           Keywords: Transcription; Transcription regulation; Zinc; Zinc-finger.
           Organism: ARABIDOPSIS THALIANA                                                  

9. ARATH_5_PE7424  RecName: Full=Histone deacetylase 6; EC=3.5.1 98; (ARATH_5.PE7424).
           Keywords: AT5G63110pg.C_scaffold_1320000031; AT5G63110.10C_scaffold_1320000031;
           Keywords: B1PXB9; B1PXC1; C0Z3B9; AB008265; AF195548; AK319083; AY072201; AY088314;
           Keywords: EU502909; EU502910; EU502911;
           Keywords: Chromatin regulator; Complete proteome; Hydrolase; Nucleus;
           Keywords: Reference proteome; Repressor; Transcription;
           Keywords: Transcription regulation.
           Organism: ARABIDOPSIS THALIANA                                                  

10. ASFUM1_7_PE257  RecName: Full=rRNA-processing protein cgrA; (ASFUM1_7.PE257).
           Keywords: EAL84894.1g.C_scaffold_1320000031; AAG28884.1;
           Keywords: rRNA-processing protein cgrA ;
           Keywords: Coiled coil; Complete proteome; Nucleus; Reference proteome;
           Keywords: Ribosome biogenesis; rRNA processing.
           Organism: ASPERGILLUS FUMIGATUS AF293                                           

11. ASFUM1_9_PE257  RecName: Full=rRNA-processing protein cgrA; (ASFUM1_9.PE257).
           Keywords: CADAFUAG00000777affold_1320000031; CADAFUAP00000777affold_1320000031;
           Keywords: AAHF01000014; AY008837;
           Keywords: Coiled coil; Complete proteome; Nucleus; Reference proteome;
           Keywords: Ribosome biogenesis; rRNA processing.
           Organism: ASPERGILLUS FUMIGATUS AF293                                           

12. ASHGO_2_PE441  RecName: Full=rRNA-processing protein FYV7; (ASHGO_2.PE441).
           Keywords: AAS50999.1003186affold_1320000031;
           Keywords: rRNA-processing protein FYV7 ;
           Keywords: Coiled coil; Complete proteome; Nucleus; rRNA processing.
           Organism: ASHBYA GOSSYPII ATCC 10895                                            

13. BOVIN19_52_PE1  RecName: Full=Nucleolar protein 11; (BOVIN19_52.PE1).
           Keywords: ENSBTAG00000015951fold_1320000031; ENSBTAP00000021210fold_1320000031;
           Keywords: BC105239;
           Keywords: Complete proteome; Nucleus; Reference proteome.
           Organism: BOS TAURUS                                                            

14. CHICK9_PE357  Flags: Fragments;
           RecName: Full=Nucleolin;AltName: Full=Protein C23; (CHICK9.PE357).
           Keywords: ENSGALG00000007705fold_1320000031; ENSGALP00000012472fold_1320000031;
           Keywords: M21791; X17199;
           Keywords: Complete proteome; DNA-binding; Methylation; Nucleus; Phosphoprotein;
           Keywords: Reference proteome; Repeat; RNA-binding.
           Organism: GALLUS GALLUS                                                         

15. HS10_PE1409  RecName: Full=ATP-dependent RNA helicase DDX50; EC=3.6.4 13;AltName:
           Full=DEAD box protein 50;AltName: Full=Gu-beta;AltName: Full=Nucleolar
           protein Gu2; (HS10.PE1409).
           Keywords: ENSG000001076251755old_1320000031; ENSP000003626877901old_1320000031;
           Keywords: B4DED6_HUMAN; B4DW97_HUMAN; Q53FI9_HUMAN; Q9NTA9_HUMAN; AF334103;
           Keywords: AK293577; AK301431; AL137423; AL359844; BC000210; BC000272; BC018637;
           Keywords: CH471083;
           Keywords: 3D-structure; ATP-binding; Complete proteome; Helicase; Hydrolase;
           Keywords: Nucleotide-binding; Nucleus; Phosphoprotein; Reference proteome;
           Keywords: RNA-binding.
           Organism: HOMO SAPIENS                                                          

16. HS10_PE1410  RecName: Full=Nucleolar RNA helicase 2; EC=3.6.4 13;AltName: Full=DEAD
           box protein 21;AltName: Full=Gu-alpha;AltName: Full=Nucleolar RNA
           helicase Gu;AltName: Full=Nucleolar RNA helicase II;AltName: Full=RH
           II/Gu; (HS10.PE1410).
           Keywords: ENSG000001657321755old_1320000031; ENSP000003461207901old_1320000031;
           Keywords: Q3SWU7_HUMAN; Q8NI92_HUMAN; AB062394; AF261903; AF261904; AF261905;
           Keywords: AF261907; AF261908; AF261909; AF261910; AF261911; AF261912; AF261913;
           Keywords: AF261915; AF261916; AF261917; AK315585; AL359844; BC008071; BC104671;
           Keywords: CR749598; U41387;
           Keywords: Acetylation; Alternative splicing; ATP-binding; Complete proteome;
           Keywords: Direct protein sequencing; Helicase; Hydrolase; Nucleotide-binding;
           Keywords: Nucleus; Phosphoprotein; Polymorphism; Reference proteome; Repeat;
           Keywords: RNA-binding.
           Organism: HOMO SAPIENS                                                          

17. HS10_PE2488  RecName: Full=Protein RRP5 homolog;AltName: Full=NF-kappa-B-binding
           protein; Short=NFBP;AltName: Full=Programmed cell death protein 11;
           (HS10.PE2488).
           Keywords: ENSG000001488431755old_1320000031; ENSP000003588127901old_1320000031;
           Keywords: B4DES7_HUMAN; AK293772; AL139339; AL591408; AL603983; AY007124; BC049838;
           Keywords: BC080560; BC111040; CH471066; D80007;
           Keywords: 3D-structure; Acetylation; Complete proteome;
           Keywords: Direct protein sequencing; Nucleus; Phosphoprotein; Polymorphism;
           Keywords: Reference proteome; Repeat; rRNA processing.
           Organism: HOMO SAPIENS