Phylogenetic tree of the HOG000231161 gene family of HOGENOM database

UniprotKB : Q96M61
Family Alignment Download SRS Archeopteryx
UniProtKB Accession numberSpecies
Display : UniprotKBSpeciesHOGENOMRaw
Bacteria
Eukarya
Archaea
Bacteroidetes
Planctomycetes
Chlamydiales
Spirochaetes
Betaproteobacteria
Gammaproteobacteria
Alphaproteobacteria
Deltaproteobacteria
Epsilonproteobacteria
Clostridia
Bacilli
Mycoplasma
Chloroflexi
Cyanobacteria
Thermus
Deinococcus
Actinobacteria
Aquificales
Thermotogales
Others
Bootstrap=0.16','#D0Fp6870(this,event,'Cavia_porcellus
HOGM398,4492,402,4496 onmouseover="showtip(this,event,'Length=0.27910
Bootstrap=1.00','#D0FFD0')" onmouseout="hidetip()" > Bootstrap=0.160946
Bootstrap=none','#D0FFD0')" onmouseout="hidetip()" > Bootstrap=0.161157
Bootstrap=0.39','#D0FFD0')" onmouseout="hidetip()" > Bootstrap=0.88','#D0FFD0')" onmouseout="hidetip()" > Bootstrap=0.160000
Bootstrap=none','#D0FFD0')" onmouseout="hidetip()" > Bootstrap=0.160000
Bootstrap=none','#D0FFD0')" onmouseout="hidetip()" > Bootstrap=0.160000
Bootstrap=none','#D0FFD0')" onmouseout="hidetip()" > Bootstrap=0.7nt,'Cavia_porcellus
HOGM233,4873,237,4877 onmouseover="showtip(this,event,'Length=0.00691
Bootstrap=0.70','#D0FFD0')" onmouseout="hidetip()" > Bootstrap=0.124813
Bootstrap=none','#D0FFD0')" onmouseout="hidetip()" > Bootstrap=0.160510
Bootstrap=none','#D0FFD0')" onmouseout="hidetip()" > Bootstrap=0.119933
Bootstrap=none','#D0FFD0')" onmouseout="hidetip()" > Bootstrap=0.114051
Bootstrap=0.98','#D0FFD0')" onmouseout="hidetip()" > Bootstrap=0.164235
Bootstrap=0.44','#D0FFD0')" onmouseout="hidetip()" > Bootstrap=0.163365
Bootstrap=0.43','#D0FFD0')" onmouseout="hidetip()" > Bootstrap=0.112623
Bootstrap=none','#D0FFD0')" onmouseout="hidetip()" > Bootstrap=0.94','#D0FFD0')" onmouseout="hidetip()" > Bootstrap=0.133981
Bootstrap=none','#D0FFD0')" onmouseout="hidetip()" > Bootstrap=0.166103
Bootstrap=0.93','#D0FFD0')" onmouseout="hidetip()" > Bootstrap=0.162415
Bootstrap=0.45','#D0FFD0')" onmouseout="hidetip()" > Bootstrap=0.9nt,'Cavia_porcellus
HOGM228,5500,232,5504 onmouseover="showtip(this,event,'Length=0.00668
Bootstrap=0.23','#D0FFD0')" onmouseout="hidetip()" > Bootstrap=0.116948
Bootstrap=none','#D0FFD0')" onmouseout="hidetip()" > Bootstrap=0.161017
Bootstrap=none','#D0FFD0')" onmouseout="hidetip()" > Bootstrap=0.161015
Bootstrap=0.84','#D0FFD0')" onmouseout="hidetip()" > Bootstrap=0.160014
Bootstrap=none','#D0FFD0')" onmouseout="hidetip()" > Bootstrap=0.100014
Bootstrap=none','#D0FFD0')" onmouseout="hidetip()" > Bootstrap=0.160000
Bootstrap=none','#D0FFD0')" onmouseout="hidetip()" > Bootstrap=0.167094
Bootstrap=0.94','#D0FFD0')" onmouseout="hidetip()" > Bootstrap=0.106659
Bootstrap=0.96','#D0FFD0')" onmouseout="hidetip()" > Bootstrap=0.99','#D0FFD0')" onmouseout="hidetip()" > Bootstrap=0.85','#D0FFD0')" onmouseout="hidetip()" > Bootstrap=0.94','#D0FFD0')" onmouseout="hidetip()" > Bootstrap=none','#D0FFD0')" onmouseout="hidetip()" > Bootstrap=0.161451
Bootstrap=0.95','#D0FFD0')" onmouseout="hidetip()" > Bootstrap=0.161275
Bootstrap=0.77','#D0FFD0')" onmouseout="hidetip()" > Bootstrap=0.72','#D0FFD0')" onmouseout="hidetip()" > Bootstrap=0.161418
Bootstrap=0.76','#D0FFD0')" onmouseout="hidetip()" > Bootstrap=none','#D0FFD0')" onmouseout="hidetip()" > Bootstrap=0.160015
Bootstrap=none','#D0FFD0')" onmouseout="hidetip()" > Bootstrap=0.160015
Bootstrap=none','#D0FFD0')" onmouseout="hidetip()" > Bootstrap=0.160678
Bootstrap=0.05','#D0FFD0')" onmouseout="hidetip()" > Bootstrap=0.160016
Bootstrap=0.80','#D0FFD0')" onmouseout="hidetip()" > Bootstrap=0.160034
Bootstrap=0.07','#D0FFD0')" onmouseout="hidetip()" > Bootstrap=none','#D0FFD0')" onmouseout="hidetip()" > Bootstrap=0.160000
Bootstrap=none','#D0FFD0')" onmouseout="hidetip()" > Bootstrap=0.160000
Bootstrap=none','#D0FFD0')" onmouseout="hidetip()" > Bootstrap=0.160000
Bootstrap=none','#D0FFD0')" onmouseout="hidetip()" > Bootstrap=0.125810
Bootstrap=none','#D0FFD0')" onmouseout="hidetip()" > Bootstrap=0.160000
Bootstrap=none','#D0FFD0')" onmouseout="hidetip()" > Bootstrap=0.167790
Bootstrap=0.98','#D0FFD0')" onmouseout="hidetip()" > Bootstrap=0.94','#D0FFD0')" onmouseout="hidetip()" > Bootstrap=0.63','#D0FFD0')" onmouseout="hidetip()" > Bootstrap=0.161259
Bootstrap=0.76','#D0FFD0')" onmouseout="hidetip()" > Bootstrap=0.120653
Bootstrap=none','#D0FFD0')" onmouseout="hidetip()" > Bootstrap=0.160015
Bootstrap=none','#D0FFD0')" onmouseout="hidetip()" > Bootstrap=0.161558
Bootstrap=0.82','#D0FFD0')" onmouseout="hidetip()" > Bootstrap=0.160000
Bootstrap=none','#D0FFD0')" onmouseout="hidetip()" > Bootstrap=0.168232
Bootstrap=none','#D0FFD0')" onmouseout="hidetip()" > Bootstrap=0.164627
Bootstrap=0.9nt,'Cavia_porcellus
HOGM258,7839,262,7843this,event,'Length=0.00607
Bootstrap=0.168203
Bootstrap=0.96','#D0FFD0')" onmouseout="hidetip()" > Bootstrap=0.160014
Bootstrap=none','#D0FFD0')" onmouseout="hidetip()" > Bootstrap=0.115253
Bootstrap=none','#D0FFD0')" onmouseout="hidetip()" > Bootstrap=0.160014
Bootstrap=none','#D0FFD0')" onmouseout="hidetip()" > Bootstrap=0.165830
Bootstrap=0.89','#D0FFD0')" onmouseout="hidetip()" > Bootstrap=0.164049
Bootstrap=0.79','#D0FFD0')" onmouseout="hidetip()" > Bootstrap=0.116393
Bootstrap=none','#D0FFD0')" onmouseout="hidetip()" > Bootstrap=0.103424
Bootstrap=none','#D0FFD0')" onmouseout="hidetip()" > Bootstrap=0.163058
Bootstrap=0.86','#D0FFD0')" onmouseout="hidetip()" > Bootstrap=0.163169
Bootstrap=0.9nt,'Cavia_porcellus
HOGM185,8241,189,8245 onmouseover="showtip(this,event,'Length=0.01779
Bootstrap=0.6nt,'Cavia_porcellus
HOGM179,8197,183,8201 onmouseover="showtip(this,event,'Length=0.00530
Bootstrap=0.70','#D0FFD0')" onmouseout="hidetip()" > Bootstrap=0.168229
Bootstrap=none','#D0FFD0')" onmouseout="hidetip()" > Bootstrap=0.164205
Bootstrap=0.94','#D0FFD0')" onmouseout="hidetip()" > Bootstrap=0.163434
Bootstrap=none','#D0FFD0')" onmouseout="hidetip()" > Bootstrap=0.166125
Bootstrap=none','#D0FFD0')" onmouseout="hidetip()" > Bootstrap=0.163773
Bootstrap=0.87','#D0FFD0')" onmouseout="hidetip()" > Bootstrap=0.130769
Bootstrap=none','#D0FFD0')" onmouseout="hidetip()" > Bootstrap=0.161383
Bootstrap=none','#D0FFD0')" onmouseout="hidetip()" > Bootstrap=0.167693
Bootstrap=0.99','#D0FFD0')" onmouseout="hidetip()" > Bootstrap=0.163146
Bootstrap=0.93','#D0FFD0')" onmouseout="hidetip()" > Bootstrap=0.97','#D0FFD0')" onmouseout="hidetip()" > Bootstrap=0.127714
Bootstrap=none','#D0FFD0')" onmouseout="hidetip()" > Bootstrap=0.159577
Bootstrap=none','#D0FFD0')" onmouseout="hidetip()" > Bootstrap=0.130076
Bootstrap=none','#D0FFD0')" onmouseout="hidetip()" > Bootstrap=0.89','#D0FFD0')" onmouseout="hidetip()" > Bootstrap=0.161055
Bootstrap=0.77','#D0FFD0')" onmouseout="hidetip()" > Bootstrap=0.162161
Bootstrap=0.84','#D0FFD0')" onmouseout="hidetip()" > Bootstrap=0.107759
Bootstrap=0.99','#D0FFD0')" onmouseout="hidetip()" > Bootstrap=0.110930
Bootstrap=none','#D0FFD0')" onmouseout="hidetip()" > Bootstrap=0.162064
Bootstrap=0.79','#D0FFD0')" onmouseout="hidetip()" > Bootstrap=0.112075
Bootstrap=none','#D0FFD0')" onmouseout="hidetip()" > Bootstrap=0.160947
Bootstrap=none','#D0FFD0')" onmouseout="hidetip()" > Bootstrap=0.161177
Bootstrap=0.58','#D0FFD0')" onmouseout="hidetip()" > Bootstrap=0.115723
Bootstrap=none','#D0FFD0')" onmouseout="hidetip()" > Bootstrap=0.129007
Bootstrap=1.00','#D0FFD0')" onmouseout="hidetip()" > Bootstrap=0.73','#D0FFD0')" onmouseout="hidetip()" > Bootstrap=0.161211
Bootstrap=none','#D0FFD0')" onmouseout="hidetip()" > Bootstrap=0.101279
Bootstrap=0.76','#D0FFD0')" onmouseout="hidetip()" > Bootstrap=0.119364
Bootstrap=none','#D0FFD0')" onmouseout="hidetip()" > Bootstrap=0.160000
Bootstrap=none','#D0FFD0')" onmouseout="hidetip()" > Bootstrap=0.100000
Bootstrap=none','#D0FFD0')" onmouseout="hidetip()" > Bootstrap=0.160000
Bootstrap=none','#D0FFD0')" onmouseout="hidetip()" > Bootstrap=0.100000
Bootstrap=none','#D0FFD0')" onmouseout="hidetip()" > Bootstrap=0.160000
Bootstrap=none','#D0FFD0')" onmouseout="hidetip()" > Bootstrap=0.162356
Bootstrap=0.86','#D0FFD0')" onmouseout="hidetip()" > Bootstrap=0.164654
Bootstrap=0.47','#D0FFD0')" onmouseout="hidetip()" > Bootstrap=0.64','#D0FFD0')" onmouseout="hidetip()" > Bootstrap=0.9nt,'Cavia_porcellus
HOGM193,9451,197,9455 onmouseover="showtip(this,event,'Length=0.19027
Bootstrap=none','#D0FFD0')" onmouseout="hidetip()" > Bootstrap=0.162089
Bootstrap=0.1nt,'Cavia_porcellus
HOGM92,4034,96,4038 onmouseover="showtip(this,event,'Length=0.22133
Bootstrap=none','#D0FFD0')" onmouseout="hidetip()" > Bootstrap=0.110948
Bootstrap=none','#D0FFD0')" onmouseout="hidetip()" > Bootstrap=0.160614
Bootstrap=0.04','#D0FFD0')" onmouseout="hidetip()" > Bootstrap=0.102667
Bootstrap=none','#D0FFD0')" onmouseout="hidetip()" > Bootstrap=0.161234
Bootstrap=0.77','#D0FFD0')" onmouseout="hidetip()" > Bootstrap=0.101584
Bootstrap=none','#D0FFD0')" onmouseout="hidetip()" > Bootstrap=0.160000
Bootstrap=none','#D0FFD0')" onmouseout="hidetip()" > Bootstrap=0.101272
Bootstrap=0.73','#D0FFD0')" onmouseout="hidetip()" > Bootstrap=0.102738
Bootstrap=0.87','#D0FFD0')" onmouseout="hidetip()" > Bootstrap=0.119704
Bootstrap=0.99','#D0FFD0')" onmouseout="hidetip()" > Bootstrap=0.125776
Bootstrap=none','#D0FFD0')" onmouseout="hidetip()" > Bootstrap=0.162203
Bootstrap=none','#D0FFD0')" onmouseout="hidetip()" > Bootstrap=0.160530
Bootstrap=0.74','#D0FFD0')" onmouseout="hidetip()" > Bootstrap=0.102665
Bootstrap=none','#D0FFD0')" onmouseout="hidetip()" > Bootstrap=0.160015
Bootstrap=none','#D0FFD0')" onmouseout="hidetip()" > Bootstrap=0.161622
Bootstrap=0.93','#D0FFD0')" onmouseout="hidetip()" > Bootstrap=0.160676
Bootstrap=0.50','#D0FFD0')" onmouseout="hidetip()" > Bootstrap=0.165350
Bootstrap=none','#D0FFD0')" onmouseout="hidetip()" > Bootstrap=0.121369
Bootstrap=none','#D0FFD0')" onmouseout="hidetip()" > Bootstrap=0.160000
Bootstrap=none','#D0FFD0')" onmouseout="hidetip()" > Bootstrap=0.124434
Bootstrap=none','#D0FFD0')" onmouseout="hidetip()" > Bootstrap=0.121128
Bootstrap=none','#D0FFD0')" onmouseout="hidetip()" > Bootstrap=0.160014
Bootstrap=none','#D0FFD0')" onmouseout="hidetip()" > Bootstrap=0.166811
Bootstrap=0.83','#D0FFD0')" onmouseout="hidetip()" > Bootstrap=0.160458
Bootstrap=0.29','#D0FFD0')" onmouseout="hidetip()" > Bootstrap=0.163160
Bootstrap=none','#D0FFD0')" onmouseout="hidetip()" > Bootstrap=0.160000
Bootstrap=none','#D0FFD0')" onmouseout="hidetip()" > Bootstrap=0.166933
Bootstrap=none','#D0FFD0')" onmouseout="hidetip()" > Bootstrap=0.160015
Bootstrap=none','#D0FFD0')" onmouseout="hidetip()" > Bootstrap=0.173040
Bootstrap=1.00','#D0FFD0')" onmouseout="hidetip()" >

  • TREE CALCULATED WITH FASTTREEMP -SPR 4 -MLACC 2 -SLOWNNI

  • GBLOCKS OPTIONS -b1=379 -b2=379 -b5=a Gblocks alignment: 236 positions (20 %) in 4 selected block(s)

  • ALIGNMENT CALCULATED WITH CLUSTALOMEGA



If you use families from HOVERGEN, HOMOLENS or HOGENOM, Please cite :

Penel S, Arigon AM, Dufayard JF, Sertier AS, Daubin V, Duret L, Gouy M and Perrière G (2009)
"Databases of homologous gene families for comparative genomics" BMC Bioinformatics, 10 (Suppl 6):S3

If you use families HOMOLENS,please cite as well Ensembl as specified here


Tree display perl modules by Li Heng.(Ruan et al. (2008)"TreeFam: 2008 Update." Nucleic Acid Res. 36 (Database issue):D735-40)
If you have problems or comments...

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