Phylogenetic tree of the HOG000268804 gene family of HOGENOM database

UniprotKB : Q86TM3
Family Alignment Download SRS Archeopteryx
UniProtKB Accession numberSpecies
Display : UniprotKBSpeciesHOGENOMRaw
Bacteria
Eukarya
Archaea
Bacteroidetes
Planctomycetes
Chlamydiales
Spirochaetes
Betaproteobacteria
Gammaproteobacteria
Alphaproteobacteria
Deltaproteobacteria
Epsilonproteobacteria
Clostridia
Bacilli
Mycoplasma
Chloroflexi
Cyanobacteria
Thermus
Deinococcus
Actinobacteria
Aquificales
Thermotogales
Others
Function:
2RISA_2891_PE288 ','#D0FFD0','500')" onmouseout="hidetip()" > Function:
2RISA_226_PE16 ','#D0FFD0','500')" onmouseout="hidetip()" > Function:
2EDHC_880_PE3 ','#D0FFD0','500')" onmouseout="hidetip()" > Function:
2EDHC_286_PE12 ','#D0FFD0','500')" onmouseout="hidetip()" > Function:
2EDHC_865_PE28 ','#D0FFD0','500')" onmouseout="hidetip()" > Function:
2EDHC_32_PE6 ','#D0FFD0','500')" onmouseout="hidetip()" > Function:Probable ATP-dependent RNA helicase DDX5 EC','#D0FFD0','500')" onmouseout="hidetip()" > Function:
2ONPY17_57_PE4 ','#D0FFD0','500')" onmouseout="hidetip()" > Function:
RABIT19_51_PE9 ','#D0FFD0','500')" onmouseout="hidetip()" > Function:
Q6AYI1_RAT','#D0FFD0','500')" onmouseout="hidetip()" > Function:
2TEVAGS_3854_PE4 ','#D0FFD0','500')" onmouseout="hidetip()" > Function:
2ROCAGS_1753_PE1 ','#D0FFD0','500')" onmouseout="hidetip()" > Function:
2OEGU18_4_PE15 ','#D0FFD0','500')" onmouseout="hidetip()" > Function:
Q6P4W2_XENTR','#D0FFD0','500')" onmouseout="hidetip()" > Function:
A4IH34_XENTR','#D0FFD0','500')" onmouseout="hidetip()" > Function:
A4IH34_XENTR','#D0FFD0','500')" onmouseout="hidetip()" > Function:
2OEGU1A_52_PE23 ','#D0FFD0','500')" onmouseout="hidetip()" > Function:
A4IH34_XENTR','#D0FFD0','500')" onmouseout="hidetip()" > Function:
2OEGUUN_160_PE7 ','#D0FFD0','500')" onmouseout="hidetip()" > Function:
2ROCAGS_1172_PE1 ','#D0FFD0','500')" onmouseout="hidetip()" > Function:
2IG5_6_PE22 ','#D0FFD0','500')" onmouseout="hidetip()" > Function:
Q5RE68_PONAB','#D0FFD0','500')" onmouseout="hidetip()" > Function:
2TEVAGS_1381_PE25 ','#D0FFD0','500')" onmouseout="hidetip()" > Function:
Q6UIQ9_PANTR','#D0FFD0','500')" onmouseout="hidetip()" > Function:
Q6UIQ9_PANTR','#D0FFD0','500')" onmouseout="hidetip()" > Function:
2HSOJ1_1283_PE85 ','#D0FFD0','500')" onmouseout="hidetip()" > Function:
D0MYJ1_PHYIT','#D0FFD0','500')" onmouseout="hidetip()" > Function:
A7SE71_NEMVE','#D0FFD0','500')" onmouseout="hidetip()" > Function:
2HPAT1_266_PE49 ','#D0FFD0','500')" onmouseout="hidetip()" > Function:
2HPAT1_266_PE51 ','#D0FFD0','500')" onmouseout="hidetip()" > Function:
2HPAT1_1621_PE1 ','#D0FFD0','500')" onmouseout="hidetip()" > Function:
2HPAT1_1288_PE1 ','#D0FFD0','500')" onmouseout="hidetip()" > Function:
B9I763_2OPTR','#D0FFD0','500')" onmouseout="hidetip()" > Function:
D7SJI2_VITVI','#D0FFD0','500')" onmouseout="hidetip()" > Function:
2IG5_14_PE5 ','#D0FFD0','500')" onmouseout="hidetip()" > Function:
2HPAT1_407_PE80 ','#D0FFD0','500')" onmouseout="hidetip()" > Function:
2HPAT1_1195_PE35 ','#D0FFD0','500')" onmouseout="hidetip()" > Function:
2HPAT1_482_PE16 ','#D0FFD0','500')" onmouseout="hidetip()" > Function:
2HPAT1_689_PE35 ','#D0FFD0','500')" onmouseout="hidetip()" > Function:
B9H9Z0_2OPTR','#D0FFD0','500')" onmouseout="hidetip()" > Function:
B9IID2_2OPTR','#D0FFD0','500')" onmouseout="hidetip()" > Function:
B9GY92_2OPTR','#D0FFD0','500')" onmouseout="hidetip()" > Function:
B9GLH4_2OPTR','#D0FFD0','500')" onmouseout="hidetip()" > Function:
VITVI_8_PE1234 ','#D0FFD0','500')" onmouseout="hidetip()" > Function:
VITVI_30_PE1314 ','#D0FFD0','500')" onmouseout="hidetip()" > Function:
VITVI_27_PE83 ','#D0FFD0','500')" onmouseout="hidetip()" > Function:
THTRA1_1_494 ','#D0FFD0','500')" onmouseout="hidetip()" > Function:
THTRA1_1_8727 ','#D0FFD0','500')" onmouseout="hidetip()" > Function:
B7FZS6_2HATC','#D0FFD0','500')" onmouseout="hidetip()" > Function:
2HSOJ1_1172_PE17 ','#D0FFD0','500')" onmouseout="hidetip()" > Function:
D0MXE0_PHYIT','#D0FFD0','500')" onmouseout="hidetip()" > Function:
2HYRM_2031_PE70 ','#D0FFD0','500')" onmouseout="hidetip()" > Function:
2UCGT_35_PE86 ','#D0FFD0','500')" onmouseout="hidetip()" > Function:
B6HVF1_PENCW','#D0FFD0','500')" onmouseout="hidetip()" > Function:
C4R6Z1_2ICPG','#D0FFD0','500')" onmouseout="hidetip()" > Function:ATP-dependent RNA helicase DED1 EC','#D0FFD0','500')" onmouseout="hidetip()" > Function:
2RIPA_4930_PE101 ','#D0FFD0','500')" onmouseout="hidetip()" >

  • TREE CALCULATED WITH FASTTREE -SPR 4 -MLACC 2 -SLOWNNI

  • GBLOCKS OPTIONS -b1=672 -b2=672 -b5=a Gblocks alignment: 351 positions (13 %) in 17 selected block(s)

  • ALIGNMENT CALCULATED WITH CLUSTALOMEGA



If you use families from HOVERGEN, HOMOLENS or HOGENOM, Please cite :

Penel S, Arigon AM, Dufayard JF, Sertier AS, Daubin V, Duret L, Gouy M and Perrière G (2009)
"Databases of homologous gene families for comparative genomics" BMC Bioinformatics, 10 (Suppl 6):S3

If you use families HOMOLENS,please cite as well Ensembl as specified here


Tree display perl modules by Li Heng.(Ruan et al. (2008)"TreeFam: 2008 Update." Nucleic Acid Res. 36 (Database issue):D735-40)
If you have problems or comments...

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