Your DBGWAS 0.4.8 results
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-strains = /data/Datasets/Pseudo_Kos-VTK/DBGWAS_strain-files/Paeru_VTK_Amikacin.txt -output = /data/Projects/00_DBGWAS_paper/output/Paeru_VTK_Amikacin_SFF40 -pt_db = /data/Datasets/annotation_DBs/uniprot_sprot_bacteria.fasta -nc_db = /data/Datasets/annotation_DBs/DBGWAS_merged_ResDB.fasta -SFF = 40 -skip2 -k = 31 -nh = 5 -maf = 0.01 -nb-cores = 1 -verbose = 1
Show figures on lineage effect
Re-run DBGWAS with a newick tree file (-newick parameter) to view figures on lineage effect.
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