Rearranged Oriloc output example: Previous Index Next
Bacteria; Firmicutes; Bacillales; Bacillaceae; Bacillus; Bacillus cereus group.
Genome size (bp): 5237682
Number of genes 5117
Oriloc predictions: Origin 0 kb Terminus 2558 kb
Worning et al., 2006: Origin 0 kb Terminus 2561 kb
Position of the first peak in DnaA box distribution (Mackiewicz et al., 2004): 5209.697 kb
Position(s) of the dnaA gene(s) (Mackiewicz et al., 2004): 1.08 kb
Consensus predictions: Origin 0 kb Terminus 2558 kb
Significant breakpoints (p-value <0.05):
| Breakpoints | P-value | Chromosome coordinate (kb) | |
| GC-skew forward | 124 | NA | 141 |
| 1784 | NA | 2547 | |
| GC-skew reverse | 3093 | NA | 2537 |
| AT-skew forward | 1647 | NA | 2360 |
| AT-skew reverse | 3121 | NA | 2581 |
| From (index/coord) | To (index/coord) | Strand | Slope | |
| GC-skew forward | 1 (0 kb) | 124 (141.4055 kb) | leading | 0.179 |
| 125 (142.3175 kb) | 1784 (2546.581 kb) | leading | 0.348 | |
| 1785 (2547.108 kb) | 2464 (5237.314 kb) | lagging | -0.125 | |
| GC-skew reverse | 2465 (0 kb) | 3093 (2537.3935 kb) | leading | 0.117 |
| 3094 (2541.5785 kb) | 5117 (5237.314 kb) | lagging | -0.309 | |
| AT-skew forward | 1 (0 kb) | 1647 (2359.857 kb) | leading | 0.037 |
| 1648 (2360.678 kb) | 2464 (5237.314 kb) | NA | -0.002 | |
| AT-skew reverse | 2465 (0 kb) | 3121 (2581.384 kb) | leading | 0.007 |
| 3122 (2584.222 kb) | 5117 (5237.314 kb) | lagging | -0.035 |
More G than C on the leading strand for replication.