Rearranged Oriloc output example: Previous Index Next
Bacteria; Actinobacteria; Actinobacteridae; Actinomycetales; Propionibacterineae; Propionibacteriaceae; Propionibacterium.
Genome size (bp): 2560265
Number of genes 2297
Oriloc predictions: Origin 0 kb Terminus 1310 kb
Worning et al., 2006: Origin 2 kb Terminus 1320 kb
Position of the first peak in DnaA box distribution (Mackiewicz et al., 2004): 2427.345 kb
Position(s) of the dnaA gene(s) (Mackiewicz et al., 2004): 1 kb
Consensus predictions: Origin 0 kb Terminus 1310 kb
Significant breakpoints (p-value <0.05):
| Breakpoints | P-value | Chromosome coordinate (kb) | |
| GC-skew forward | 715 | 0 | 1296 |
| GC-skew reverse | 1610 | 0 | 1324 |
| AT-skew forward | 61 | 0.03333 | 135 |
| 733 | 0 | 1326 | |
| AT-skew reverse | 1575 | 0.00444 | 1190 |
| 1999 | 0.00889 | 1995 | |
| 2119 | 0.03333 | 2173 |
| From (index/coord) | To (index/coord) | Strand | Slope | |
| GC-skew forward | 1 (0 kb) | 715 (1295.8895 kb) | leading | -0.046 |
| 716 (1296.285 kb) | 1143 (2560.15 kb) | lagging | -0.229 | |
| GC-skew reverse | 1144 (0 kb) | 1610 (1324.0575 kb) | leading | 0.226 |
| 1611 (1325.467 kb) | 2297 (2560.15 kb) | lagging | 0.061 | |
| AT-skew forward | 1 (0 kb) | 61 (135.021 kb) | leading | -0.256 |
| 62 (136.4535 kb) | 733 (1326.4735 kb) | leading | -0.358 | |
| 734 (1328.367 kb) | 1143 (2560.15 kb) | lagging | -0.123 | |
| AT-skew reverse | 1144 (0 kb) | 1575 (1189.9535 kb) | leading | 0.108 |
| 1576 (1190.582 kb) | 1999 (1995.038 kb) | lagging | 0.349 | |
| 2000 (1995.883 kb) | 2119 (2172.794 kb) | lagging | 0.524 | |
| 2120 (2173.585 kb) | 2297 (2560.15 kb) | lagging | 0.383 |
More G than C on the leading strand for replication.