Rearranged Oriloc output example: Previous Index Next
Bacteria; Firmicutes; Lactobacillales; Streptococcaceae; Streptococcus.
Genome size (bp): 2127839
Number of genes 1995
Oriloc predictions: Origin 0 kb Terminus 1046 kb
Worning et al., 2006: Origin 2111 kb Terminus 1048 kb
Position of the first peak in DnaA box distribution (Mackiewicz et al., 2004): 2127.83 kb
Position(s) of the dnaA gene(s) (Mackiewicz et al., 2004): 0.78 kb, 244.17 kb, 245.71 kb, 1627.69 kb, 1942.93 kb
Consensus predictions: Origin 0 kb Terminus 1046 kb
Significant breakpoints (p-value <0.05):
| Breakpoints | P-value | Chromosome coordinate (kb) | |
| GC-skew forward | 791 | NA | 1039 |
| GC-skew reverse | 1217 | NA | 1082 |
| 1494 | NA | 1438 | |
| 1711 | NA | 1717 | |
| AT-skew forward | 411 | NA | 536 |
| 472 | NA | 600 | |
| 921 | NA | 1838 | |
| AT-skew reverse | 1250 | NA | 1118 |
| From (index/coord) | To (index/coord) | Strand | Slope | |
| GC-skew forward | 1 (0 kb) | 791 (1039.2865 kb) | leading | 0.133 |
| 792 (1040.0525 kb) | 1012 (2127.728 kb) | lagging | -0.198 | |
| GC-skew reverse | 1013 (0 kb) | 1217 (1081.57 kb) | NA | 0.171 |
| 1218 (1082.976 kb) | 1494 (1438.06 kb) | lagging | -0.123 | |
| 1495 (1439.2855 kb) | 1711 (1716.5515 kb) | lagging | -0.168 | |
| 1712 (1717.9205 kb) | 1995 (2127.728 kb) | lagging | -0.114 | |
| AT-skew forward | 1 (0 kb) | 411 (536.12 kb) | leading | -0.094 |
| 412 (536.994 kb) | 472 (600.2635 kb) | leading | 0.011 | |
| 473 (602.0255 kb) | 921 (1837.5695 kb) | NA | -0.113 | |
| 922 (1838.448 kb) | 1012 (2127.728 kb) | lagging | -0.055 | |
| AT-skew reverse | 1013 (0 kb) | 1250 (1117.865 kb) | NA | 0.086 |
| 1251 (1119.5895 kb) | 1995 (2127.728 kb) | lagging | 0.113 |