Rearranged Oriloc output example: Previous Index Next
Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Psychrobacter.
Genome size (bp): 3059876
Number of genes 2467
Oriloc predictions: Origin 0 kb Terminus 1670 kb
Worning et al., 2006: Origin 1 kb Terminus 1690 kb
Position of the first peak in DnaA box distribution (Mackiewicz et al., 2004): 1.169 kb
Position(s) of the dnaA gene(s) (Mackiewicz et al., 2004): 2.09 kb, 2288.85 kb
Consensus predictions: Origin 0 kb Terminus 1670 kb
Significant breakpoints (p-value <0.05):
| Breakpoints | P-value | Chromosome coordinate (kb) | |
| GC-skew forward | 566 | NA | 1142 |
| 740 | NA | 1654 | |
| GC-skew reverse | 1816 | NA | 1607 |
| AT-skew forward | 165 | NA | 369 |
| AT-skew reverse | 2102 | NA | 2234 |
| From (index/coord) | To (index/coord) | Strand | Slope | |
| GC-skew forward | 1 (0 kb) | 566 (1142.0785 kb) | leading | 0.062 |
| 567 (1147.2315 kb) | 740 (1654.1595 kb) | leading | 0.106 | |
| 741 (1655.0605 kb) | 1225 (3059.876 kb) | lagging | -0.043 | |
| GC-skew reverse | 1226 (0 kb) | 1816 (1607.261 kb) | leading | 0.048 |
| 1817 (1608.022 kb) | 2467 (3059.876 kb) | lagging | -0.08 | |
| AT-skew forward | 1 (0 kb) | 165 (368.5135 kb) | leading | -0.176 |
| 166 (371.1705 kb) | 1225 (3059.876 kb) | NA | -0.185 | |
| AT-skew reverse | 1226 (0 kb) | 2102 (2234.2035 kb) | NA | 0.179 |
| 2103 (2235.2945 kb) | 2467 (3059.876 kb) | lagging | 0.195 |