LSU rRNA multiple sequence alignment
Multiple sequence alignment of 40 LSU rRNA sequences.
Only sites selected for phylogenetic analyses are intended to be correctly aligned.
These are indicated by series of * at bottom
1
Mycobacter.lepra ---------- ---------- ---------- ---------- ---------- ---------- --AAGTAAGT G-CCTAAGGG CGCATGGTGG ATGCCTT--G
Streptomyc.grise ---------- ---------- ---------- ---------- ---------- ---------- --GGCCAAGT T-TTTAAGGG CGCACGGTGG ATGCCTT--G
Bacillus.subti ---------- ---------- ---------- ---------- ---------- ---------- --GGTTAAGT T-AGAAAGGG CGCACGGTGG ATGCCTT--G
Lactobacil.delbr ---------- ---------- ---------- ---------- ---------- ---------- --GGTCAAGT G-AAGAAGGG CGCACGGTGA ATGCCTT--G
Leuconosto.mesen ---------- ---------- ---------- ---------- ---------- ---------- --OOOOOOOO O-OOOOOOOO OOOOOOOOOO OOOOOOO--O
Staphyloco.aureu ---------- ---------- ---------- ---------- ---------- ---------- --GATTAAGT T-ATTAAGGG CGCACGGTGG ATGCCTT--G
Bartonella.bacil ---------- ---------- ---------- ---------- ---------- ---------- ---ATCAAGT GTCTTAAGGG CATTTGGTGG ATGCCTT--G
Rhodopseud.palus ---------- ---------- ---------- ---------- ---------- ---------- --AATCAAGT GCCTTAAGGG TGTTCGACGG ATGCCTT--G
Rickettsia.ricke ---------- ---------- ---------- ---------- ---------- ---------- --OOOOOOOO OOOOOOOOOO OOOOOOOOOO OOOOOOO--O
Bordetella.bronc ---------- ---------- ---------- ---------- ---------- ---------- --GATCAAGC G-ACTAAGTG CATATGGTGG ATGCCTT--G
Escherichi.coli ---------- ---------- ---------- ---------- ---------- ---------- --GGTTAAGC G-ACTAAGCG TACACGGTGG ATGCCCT--G
Haemophilu.influ ---------- ---------- ---------- ---------- ---------- ---------- ---GTTAAGT G-ACTAAGCG TACAAGGTGG ATGCCTT--G
Thermus.therm ---------- ---------- ---------- ---------- ---------- ---------- --GGTCAAGA T-GGTAAGGG CCCACGGTGG ATGCCTC--G
Thermotoga.marit ---------- ---------- ---------- ---------- ---------- ---------- --GGTCAAGG T-ACTAAGGG CACGCGGTGG ATGCCTT--G
Zea.mays.CP ---------- ---------- ---------- ---------- ---------- ---------- -GGTTCAAAA G-AGGAAAGG CTTGCGGTGG ATACCTA--G
nChlamydomo.reinh.CP ---------- ---------- ---------- ---------- ---------- ---------- ----OOOOOO G-AATTAAGG CGTACGGTGG AGACCTA--G
Euglena.graci.CP ---------- ---------- ---------- ---------- ---------- ---------- -GGTTCAAAT G-AACAAGGG CTTATGCGGG ATTGCTT--G
Desulfuroc.mobil ---------- ---------- ---------- ---------- ---------- ---------- --------CG ---ACGACGC CGCCCGGTGG ATGGCTC--G
Sulfolobus.acido ---------- ---------- ---------- ---------- ---------- ----GAGTTC TACCCAGGGG ---CCGAAGC CTCCCGGTGG ATGGCTC--G
Thermofilu.pende ---------- ---------- ---------- ---------- ---------- ---------- --------CG ----CTAAGC CACCCGGTGG ATGGCTC--G
Thermoprot.tenax ---------- ---------- ---------- ---------- ---------- ---------- -----GCACG ---GTCAAGC CGCCCGGTGG ATGGCTC--G
Halobacter.halob ---------- ---------- ---------- ---------- ---------- ---------- ----GTGGCT ---ACTGTGC CACCTGGTGG ATAGCTC--G
Halobacter.maris ---------- ---------- ---------- ---------- ---------- ---------- ---GTTGGCT ---ACTATGC CAGCTGGTGG ATTGCTC--G
Halococcus.morrh ---------- ---------- ---------- ---------- ---------- ---------- ------GGCT ---ACTATGC CAACTGGTGA ATAGCTC--G
Natronobac.magad ---------- ---------- ---------- ---------- ---------- ---------- ----GTGGCT ---ACTGTGC CAGCTGGTGG ATCGCTC--G
Methanococ.vanni ---------- ---------- ---------- ---------- ---------- ---------- -----TATCT ---ATTACCC TACCTGGGGA ATGGCTT--G
Methanococ.janna ---------- ---------- ---------- ---------- ---------- ---------- ---------- ------AGCC CACCTGGTGG ATGGCTC--G
Xenopus.laevi ---------- ---------- ---------- ---------- ---------- ---------- ---------- -TCGCGACTC TTAGCGGTGG ATCACTC--G
Homo.sapie ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----CGACTC TTAGCGGTGG ATCACTC--G
Candida.albic ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----AAACTT TCAACAACGG ATCTCTT--G
Saccharomy.cerev ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----AAACTT TCAACAACGG ATCTCTT--G
Schizosacc.pombe ---------- ---------- ---------- ---------- ---------- ---------- ------ATTA TTTAAAACTT TCAGCAACGG ATCTCTT--G
Oryza.sativ ---------- ---------- ---------- ---------- ---------- ---------- ---------- CACACGACTC TCGGCAACGG ATATCTC--G
Arabidopsi.thali ---------- ---------- ---------- ---------- ---------- ---------- ---------- AAAACGACTC TCGGCAACGG ATATCTC--G
Fragaria.anana ---------- ---------- ---------- ---------- ---------- ---------- ---------C TAAACGACTC TCGGCAACGG ATATCTC--G
Chlorella.ellip ---------- ---------- ---------- ---------- ---------- ---------- ---------- OOOOOOOOOO OOOOOOOOOO OOOOOOO--O
nEuglena.graci ---------- ---------- ---------- ---------- ---------- ---------- ---------- ------ACCT GTTGTGGTGG ATGTCTT--G
Entamoeba.histo ---------- ---------- ---------- ---------- ---------- ---------- ---------- ------AAAT ATTACTTTGG ATAGTTT--A
nTrypanosom.bruce ---------- ---------- ---------- ---------- ---------- ---------- ---------- -----AACGT GTCGCGATGG ATGACTT--G
Giardia.intes ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----AACGCC CCGCCGGCGG ATGCCTC--G
101
Mycobacter.lepra GCATCGAGAG CCG-ATGAAG -GACGTGGG- -AGGC-TG-C GATATGCCTC GGGGAGCTGT -CAACCGAGC -GTGGATCCG AGGAT----- ----TTCCGA
Streptomyc.grise GCACCAGGAA CCG-ATGAAG -GACGTGGG- -AGGC-CA-C GATAGTCCCC GGGGAGCTGT -CAACCAAGC -TTTGATCCG GGGGT----- ----TTCCGA
Bacillus.subti GCACTAGGAG CCG-ATGAAG -GACGGGAC- -GAAC-AC-C GATATGCTTC GGGGAGCTG- -TAAGCAAGC -TTTGATCCG GAGAT----- ----TTCCGA
Lactobacil.delbr GCACTGGAAG CCG-ATGAAG -GACGCGAC- -TAAC-CG-C GAAAGTCTTC GGGGAGCCG- -TAAGTAGGC -TTTGATCCG GAGGT----- ----CTCCGA
Leuconosto.mesen OOOOOOOOOO OOO-OTGAAG -GACGTGAC- -TAAC-NA-C GATAAGCTTT GGTGAGCGG- -TAAGTACGC -TATGACCCA AAGAT----- ----TTCCGA
Staphyloco.aureu GCACTAGAAG CCG-ATGAAG -GACGTTAC- -TAAC-GA-C GATATGCTTT GGGGAGCTG- -TAAGTAAGC -TTTGATCCA GAGAT----- ----TTCCGA
Bartonella.bacil GCATGCACAG GCG-ATGAAG -GACGTGAT- -ACGC-TG-C GATAAGCTAC GGGGAGGTG- -CGAATACCC -TTTGATCCG TAGAT----- ----TTCCGA
Rhodopseud.palus GCGCTGAGAG GCG-ATGAAG -GACGTGCT- -ACGC-TG-C GATAAGCCAT GGGGAGCTG- -CGAAGAAGC -TTTGATCCG TGGAT----- ----TTCCGA
Rickettsia.ricke OOOOOOOOOO OOO-OOOOOO -OOOOOOOT- -ACGC-TG-C GATAAGCTTC GGGGAGTTG- -CGAATAAAC -TTCGATCCG AAGAT----- ----TTCCGA
Bordetella.bronc GCGATCACAG GCGGATGAAG -GACGTAGT- -AGCC-TG-C GAAAAGCTGC GGGGAGCTGG -CAAACAAGC -ATTGATCCG CAGAT----- ----ATCCGA
Escherichi.coli GCAGTCAGAG GCG-ATGAAG -GACGTGCT- -AATC-TG-C GATAAGCGTC GGTAAGGTG- -ATATGAACC GTTATAACCG GCGAT----- ----TTCCGA
Haemophilu.influ GCAATCAGAG GCG-AAGAAG -GACGTGCT- -AATC-TG-C GAAAAGCTTG GATGAGTCG- -ATAAGAGGC GTTTAATCCA -AGAT----- ----ATCCGA
Thermus.therm GCACC-CGAG CCG-ATGAAG -GACGTGGC- -TACC-TG-C GATAAGCCAG GGGGAGCCG- -GTAGCGGGC -GTGGATCCC TGGAT----- ----GTCCGA
Thermotoga.marit GCGGCGGGAG GCG-ATGAAG -GGCGTGGC- -AAGC-TG-C GATAAGCCCG GGGGAGCCG- -CAAGCAGGC -GTTGATCCC GGGAT----- ----TCCCGA
Zea.mays.CP GCACCCAGAG ACG-AGGAAG AGGCGTAGC- -AAGC-GA-C GAAATGCTTC GGGGAGTTG- -AAAATAAGC -ATAGATCCG GAGAT----- ----TCCCAA
nChlamydomo.reinh.CP GCACTCAGAG ACG-AAGAAG -GGCGCAGA- -TACC-GG-C GATACGCTTC GGGGAGCTG- -GCAACAAGC -TTTGATCCG AAGAT----- ----TCCCGA
Euglena.graci.CP GCATTTAGAG TCG-AAGAAG -GGCGTAGA- -AATT-AA-C GATATGCTTT AGGGAGCTA- -AAGACGAGC -TTTAATCTA AAGAT----- ----TCCCG-
Desulfuroc.mobil GCTCGGG-CG CCG-AGGAAG -GCCGTGGC- -AAGC-TG-C GATAAGCCCG GGGTAGGCG- -CAGGCAGCC -GTTGAACCC GGGAT----- ----CGCCGA
Sulfolobus.acido GCTCGGG-CA CCG-AAGAAG -GGCGCGGC- -AAGC-AG-C GAAATGCTCG GGTGAGGCG- -CAAGCAGCC -GTTGACCCC GAGGT----- ----CCCCTA
Thermofilu.pende GCTCGGG-CG CCG-AGGAAG -GCCGTGGC- -AAGC-GG-C GATACGCCCC GGGGAGCCG- -CATGCAGGC -TTCGATCCG GGGAT----- ----CGCCGA
Thermoprot.tenax GCTCGGG-CG CCG-AGGAAG -GGCGTGGC- -AAGC-TG-C GATAAGCCCG GGGTAGCCG- -CAG-CGGGC -GTTGAACCC GGGAT----- ----TCCCGA
Halobacter.halob GCTCGGAT-G CCG-ACGAAG -GACGTGCC- -AAGC-TG-C GATAAGCCTG AGGGAGCCG- -CACGGAGGC -TAAGAACTC AGGAT----- ----CTCCTA
Halobacter.maris GCTCAGGC-G CTG-ATGAAG -GACGTGCC- -AAGC-TG-C GATAAGCCAT GGGGAGCCG- -CACGGAGGC -GAAGAACCA TGGAT----- ----TTCCGA
Halococcus.morrh GCTCGAGT-G CCG-ATGAAG -GACGTGCC- -AAGC-TG-C GATAAGCTCA GGGGAGCCG- -CACGGAGGC -GAAGAACCT GAGAT----- ----TTCCGA
Natronobac.magad GCTTGAG-AG CTG-AAGACG -GACGTGCC- -AAGC-TG-C GATAAGCCTC AGGGACCCG- -CACGGAGGG -AAAGAACTG AGGAT----- ----TTCCGA
Methanococ.vanni GCTTGAAACG CCG-ATGAAG -GACGTGGT- -AAGC-TG-C GATAAGCCTA GGCGAGGCG- -CATACAGCC -TTTGAACCT AGGAT----- ----TTCCGA
Methanococ.janna GCTCGGGGCG CCG-AGGAAG -GGCGTGGC- -AAGC-TG-C GATAAGCCCG GGGGAGGCG- -CAGGCAGCC -GTGGAACCC GGGAT----- ----CCCCGA
Xenopus.laevi GCTCGTGC-G TCG-ATGAAG -AACGCAGC- -TAGC-TG-C GAGAATTAGT -GTGAATTG- -CAG--GA-C ACATTGATCA TCGACA---- ----CTTCGA
Homo.sapie GCTCGTGC-G TCG-ATGAAG -AACGCAGC- -TAGC-TG-C GAGAATTAAT -GTGAATTG- -CAG--GA-C ACATTGATCA TCGACA---- ----CTTCGA
Candida.albic GTTCTCGC-A TCG-ATGAAG -AACGCAGC- -GAAA-TGCC GATACGTAAT -ATGAATTG- -CAG--ATAT CCGTGAATCA TCGAAT---- ----CTTTGA
Saccharomy.cerev GTTCTCGC-A TCG-ATGAAG -AACGCAGC- -GAAA-TG-C GATACGTAAT -GTGAATTG- -CAG--AATT CCGTGAATCA TCGAAT---- ----CTTTGA
Schizosacc.pombe GCTCTCGC-A TCG-ATGAAG -AACGCAGC- -GAAA-TG-C GATACGTAAT -GTGAATTG- -CAG--AATT CCGTGAATCA TCGAAT---- ----CTTTGA
Oryza.sativ GCTCTCGC-A TCG-ATGAAG -AACGTAGC- -GAAA-TG-C GATACCTGGT -GTGAATTG- -CAG--AATC CCGTGAACCA TCGAGT---- ----CTTTGA
Arabidopsi.thali GCTCTCGC-A TCG-ATGAAG -AACGTAGC- -GAAA-TG-C GATACTTGGT -GTGAATTG- -CAG--AATC CCGTGAACCA TCGAGT---- ----CTTTGA
Fragaria.anana GCTCTCGC-A TCG-ATGAAG -AACGTAGC- -GAAA-TG-C GATACTTGGT -GTGAATTG- -CAG--AATC CCGTGAACCA TCGAGT---- ----CTTTGA
Chlorella.ellip OOOOOOOO-O OOO-OOOOOO -OOOOOOOO- -OOOO-OO-O OOOOOOOOOO -OOOOOOOO- -OOO--OOOO OOOOOOOOOO OOOOOO---- ----OOOOOO
nEuglena.graci GCCCAGGT-T CTG-AGGAAG -GACACAGC- -AGCCTTG-C GATACGTTCG -GTGATACG- -CAG--AGTC TTGTGAT-CT GGACAAAGGA ACAGCTTCGA
Entamoeba.histo GTTTCCTG-G GCG-ATGAAG -AACGCAAT- -GAAT-TG-C GATAAGTGAT -AGGAACAA- -TAAAATGT- ----GAA-TA TCCAA----- ---AATTTGA
nTrypanosom.bruce GCTTCCTATT TCG-TTGAAG -AACGCAGC- -AAAG-TG-C GATAAGTGGT -ATCAATTG- -CAG--AAT- CATTTCATTG CCCAA----- ---TCTTTGA
Giardia.intes GCCCGGGC-G GCG-ACGAAG -AGCGCGGC- -GGAG-CG-C GAGACGCGGT -GCGGACCC- -GCC-CGCCC CGA-GAAGCA CCGA------ ---CCCTCGA
201
Mycobacter.lepra ATGGGGAAA- -CCCAACACG A--------- ---------- ---------- ---------- ---------- -----GTCAC G--------- ----------
Streptomyc.grise ATGGGGAAA- -CCCGGCAGT C--------- ---------- ---------- ---------- ---------- -----GTCAT G--------- ----------
Bacillus.subti ATGGGGAAA- -CCCACCACT C--------- ---------- ---------- ---------- ---------- -----GTAAT G--------- ----------
Lactobacil.delbr ATGGGGGAA- -CCCAGCATG T--------- ---------- ---------- ---------- ---------- -------GCA G--------- ----------
Leuconosto.mesen ATGGGGAAA- -CCCAACTC- ---------- ---------- ---------- ---------- ---------- -----GTAA- ---------- ----------
Staphyloco.aureu ATGGGGAAA- -CCCAGCATG A--------- ---------- ---------- ---------- ---------- -----GTTAT G--------- ----------
Bartonella.bacil ATGGGGCAA- -CCCACCTTT GACTGCTGGA AACGTTAAGC T--------- ---------- ---------- GTTTTGCAA- AAGAC----- ----------
Rhodopseud.palus ATGGGGAAA- -CCCACCTTC GATAGCCGGA ACTCCAAGGC CTTGC----- ---------- ---------- GTTTCGAGA- GAGAC----- ----------
Rickettsia.ricke ATAGGGAAA- -CCTACCTAA ---------- ---------- ---------- ---------- ---------- -----TTTA- ---------- ----------
Bordetella.bronc ATGGGGAAA- -CCCACGG-- ---------- ---------- ---------- ---------- ---------- -----CAAG- ---------- ----------
Escherichi.coli ATGGGGAAA- -CCCAGTGTG T--------- ---------- ---------- ---------- ---------- -----TTCG- ---------- ----------
Haemophilu.influ ATGGGGAAA- -CCCAGTAGA T--------- ---------- ---------- ---------- ---------- -----GAAG- ---------- ----------
Thermus.therm ATGGGGGAA- -CCCGGCCGG C--------- ---------- ---------- ---------- ---------- -----GGGAA C--------- ----------
Thermotoga.marit ATGGGGAAA- -CCTGGGTGG CC-------- ---------- ---------- ---------- ---------- -----GTTGA ---------- ----------
Zea.mays.CP ATAGGTCAA- -CCTT----- ---------- ---------- ---------- ---------- ---------- -----TTGA- ---------- ----------
nChlamydomo.reinh.CP ATAGGGCAA- -CCTC----- ---------- ---------- ---------- ---------- ---------- -----ATAG- ---------- ----------
Euglena.graci.CP ATGGGGCAA- -CCTAT---- ---------- ---------- ---------- ---------- ---------- -----TACTT T--------- ----------
Desulfuroc.mobil ATGGGACTT- -CCCGCCACG GG-------- ---------- ---------- ---------- ---------- -----TTAAA ---------- ----------
Sulfolobus.acido ATGGGATAT- -CCTGCCGG- ---------- ---------- ---------- ---------- ---------- -----GTTT- ---------- ----------
Thermofilu.pende ATGGGACCT- -CCTGCCGTG GG-------- ---------- ---------- ---------- ---------- -----TCAA- ---------- ----------
Thermoprot.tenax ATGGGGCTT- -CCTACCGGG GCC------- ---------- ---------- ---------- ---------- -----GAACA ---------- ----------
Halobacter.halob ATGGGAAT-- -CCCT----- ---------- ---------- ---------- ---------- ---------- -----ATAAC A--------- ----------
Halobacter.maris ATGAGAAT-- -CTCT----- ---------- ---------- ---------- ---------- ---------- -----CTAAC A--------- ----------
Halococcus.morrh ATGGGAAT-- -CCCC----- ---------- ---------- ---------- ---------- ---------- -----ACCGC A--------- ----------
Natronobac.magad ATGGGAAT-- -CCCC----- ---------- ---------- ---------- ---------- ---------- -----ACCGC A--------- ----------
Methanococ.vanni ATGGGACTT- -CCTAC---- ---------- ---------- ---------- ---------- ---------- -----TTTT- ---------- ----------
Methanococ.janna ATGGGACTT- -CCTGC---- ---------- ---------- ---------- ---------- ---------- --CCCATTTG GGG------- ----------
Xenopus.laevi A-CGCACCTT -GCGGCCCCG GG-------- ---------- ---------- ---------- ---------- -----TTCCT ---------- ----------
Homo.sapie A-CGCACTT- -GCGGCCCCG GG-------- ---------- ---------- ---------- ---------- -----TTCCT ---------- ----------
Candida.albic A-CGCACATT -GCGCCCTCT GG-------- ---------- ---------- ---------- ---------- -----TATT- ---------- ----------
Saccharomy.cerev A-CGCACATT -GCGCCCCTT GG-------- ---------- ---------- ---------- ---------- -----TATT- ---------- ----------
Schizosacc.pombe A-CGCACATT -GCGCCTTTG GG-------- ---------- ---------- ---------- ---------- -----TTCT- ---------- ----------
Oryza.sativ A-CGCAAGTT -GCGCCCGAG GCC------- ---------- ---------- ---------- ---------- -----ATCC- ---------- ----------
Arabidopsi.thali A-CGCAAGTT -GCGCCCCAA GCC------- ---------- ---------- ---------- ---------- -----TTCT- ---------- ----------
Fragaria.anana A-CGCAAGTT -GCGCCCGAA GCC------- ---------- ---------- ---------- ---------- -----GTTA- ---------- ----------
Chlorella.ellip O-OOOOOOOO -OOOOOOOOO OOO------- ---------- ---------- ---------- ---------- -----OOOO- ---------- ----------
nEuglena.graci A-CGCAACTG -GCCAGCAAG GGG------- ---------- ---------- ---------- ---------- -----TTCCC ---------- ----------
Entamoeba.histo A-TGCTTGAA AGTATACTTA TGA------- ---------- ---------- ---------- ---------- ------ACT- ---------- ----------
nTrypanosom.bruce A-CGCAAACG -GCGCATGGG AGAAGCTC-- ---------- ---------- ---------- ---------- -----TCTC- ---------- ----------
Giardia.intes A-CGCAGC-- -GCGC----- ---------- ---------- ---------- ---------- ---------- -----CCCG- ---------- ----------
301
Mycobacter.lepra ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Streptomyc.grise ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Bacillus.subti ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Lactobacil.delbr ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Leuconosto.mesen ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Staphyloco.aureu ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Bartonella.bacil ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- -----AGTTT
Rhodopseud.palus ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- -GTGAGGGTT
Rickettsia.ricke ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Bordetella.bronc ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Escherichi.coli ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Haemophilu.influ ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Thermus.therm ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Thermotoga.marit ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Zea.mays.CP ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
nChlamydomo.reinh.CP ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Euglena.graci.CP ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Desulfuroc.mobil ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Sulfolobus.acido ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Thermofilu.pende ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Thermoprot.tenax ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Halobacter.halob ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Halobacter.maris ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Halococcus.morrh ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Natronobac.magad ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Methanococ.vanni ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Methanococ.janna ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Xenopus.laevi ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Homo.sapie ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Candida.albic ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Saccharomy.cerev ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Schizosacc.pombe ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Oryza.sativ ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Arabidopsi.thali ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Fragaria.anana ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Chlorella.ellip ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
nEuglena.graci ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Entamoeba.histo ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
nTrypanosom.bruce ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Giardia.intes ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
401
Mycobacter.lepra ---------- ---------T CGTGTTA-CC CGTATCTGAA T------ATA T--------- ---------- ---AGGGTTC G-GG-AGGGA AC--GCGGGG
Streptomyc.grise ---------- ---------G GCTGTCA-CC CGCTGCTGAA C------ACA T--------- ---------- ---AGGCAGT GTGG-AGGGA AC--GAGGGG
Bacillus.subti ---------- ---------G AGTGGTA-TC CATATCTGAA T------TCA T--------- ---------- ---AGGATAT GAGAAGGCAG AC--CCGGGG
Lactobacil.delbr ---------- ---------A CATGCTA-TC CTTAAGTGAA T------ACA T--------- ---------- ---AGCTTAA G-GAGGGAAC AC--GCAGTG
Leuconosto.mesen ---------- ---------- -GAGTTG-TC TGTATCTGAA T------ACA T--------- ---------- ---AGGATAT TTGACGGAAT AC--GCTGTG
Staphyloco.aureu ---------- ---------T CATGTTA-TC GATATGTGAA T------ACA T--------- ---------- ---AGCATAT CAGAAGGCAC AC--CCGGAG
Bartonella.bacil AGGTTTCTAG TTGTCTTTAA TAAGGTATCT T-CATCTGAA T------AAA AT-------- ---------- ---AGGGTGT AAGA-AGCGA AC--GCAGGG
Rhodopseud.palus TGGATTTCCG GTTATCAAGA GAAGGTATGA GATCTCTGAA T------ACA T--------- ---------- ---AGGAGGT TTCA-AGCGA AC--CCAGGG
Rickettsia.ricke ---------- ---------- TTAGGTATTG TAT-AGTGAA T------ACA T--------- ---------- ---AGC-TAT ATGA-GGCAA AC--CCAGCG
Bordetella.bronc ---------- ---------- --CGGTA-TC CCTGGCTGAA T------ACA T--------- ---------- ---AGGCCAG TGGA-GGCGA AC--CGGGTG
Escherichi.coli ---------- ---------A CACACTA-TC ATTAACTGAA T------CCA T--------- ---------- ---AGGTTAA T-GA-GGCGA AC--CGGGGG
Haemophilu.influ ---------- --------AA TCTACTA-TC AACAAGTGAA T------TCA T--------- ---------- ---AGCTTGT T-GA-GGCAA AC--CGGGAG
Thermus.therm ---------- ---------G CCGGTCA-CC GCGC------ -------TTT T--------- ---------- -------GCG C-GG-GGGGA AC--CTGGGG
Thermotoga.marit ---------- --------GG CCACTCG-CC GCC------- -------GAA A--------- ---------- --------GG C-GGTGCGAC AC--CGGGGG
Zea.mays.CP ---------- ---------- ------A-CT GCCTGCCGAA T------CCA T--------- ---------- ---GAGCAGG C-AAGAGACA AC--CTGGCG
nChlamydomo.reinh.CP ---------- ---------- -----AA-CT ACCTATATAA T------TCA T--------- ---------- ---AGTTAGG T-AAGAGGCA AC--CCAGTG
Euglena.graci.CP ---------- ---------- -----AA-CA TTACAATGAA AT----GGTA T--------- ---------- ---ACAAATA A-TGTAGAGA AC--TTGGTG
Desulfuroc.mobil ---------- --------CC CGTGGCT-GC CCGGGAAACC C------GCG AG-------- ---------- GGGAGTACCG G-GC--GGGA AC--CCCCCG
Sulfolobus.acido ---------- ---------- -CCGGC--GC TCCCG----G TT------TA T--------- ---------- ---AACTGGG A-GT--GGGA AC--CCCCCG
Thermofilu.pende ---------- --------CC CACGGC--GC TCGGGA-AAC CC-----GCA AG-------- ---------- GGGAGTACCG A-GC--GGGA AC--CCCCCC
Thermoprot.tenax ---------- -------GGC TCCGGT--GC CCC------- -------GTA A--------- ---------- --------GG G-GC--GGGA AC--GCGGGG
Halobacter.halob ---------- ---------- --------AT TGC------- -------CTT GC-------- ---------- --------GC A-AT-GGGGA AC--GGCCGG
Halobacter.maris ---------- ---------- --------AT TGC------- -------TTC GC-------- ---------- --------GC A-AT-GAGGA AC--CCCGAG
Halococcus.morrh ---------- ---------- --------AT TGC------- ------CTTC GC-------- ---------- --------GC A-AT-GGGGA AC--GCCGGG
Natronobac.magad ---------- ---------- --------AT TCG------- -------TTC GC-------- ---------- --------GC A-AT-GGGGA AC--GCCGAG
Methanococ.vanni ---------- ---------- ----GTA-AT CC-------- -------GTA A--------- ---------- ---------G G-AT-TGGTA AC--GCGGGG
Methanococ.janna ---------- ---------- ----CGC-TC CC-------- -------GTT A--------- ---------- ---------G G-GAGCGGGA AC--GCGGGG
Xenopus.laevi ---------- --------CC CGGGGCCACG CCTGT---CT GAGGGTCGCT CC-------- ------TCAG ACCTCAGATC AGACGCGGCG AC--CCGCTG
Homo.sapie ---------- --------CC CGGGGCTACG CCTGT---CT GAGCGTCGCT T--------- ------CGCG ACCTCAGATC AGACGTGGCG AC--CCGCTG
Candida.albic ---------- --------CC GGAGGGCATG CCTGT---TT GAGCGTCGTT T--------- ------TTTG ACCTCAAATC AGGTAGGACT AC--CCGCTG
Saccharomy.cerev ---------- --------CC AGGGGGCATG CCTGT---TT GAGCGTCATT T--------- -----GTTTG ACCTCAAATC AGGTAGGAGT AC--CCGCTG
Schizosacc.pombe ---------- --------AC CAAAGGCATG CCTGT---TT GAGTGTCATT ---------- -----ATTTG ACCTCAAATC AGGTAGGACT AC--GCGCTG
Oryza.sativ ---------- -------GGC CGAGGGCACG CCTGC---CT GGGCGTCACG C--------- -----GCGCG ACCCCAGGTC AGGCGGGACT AC--CCGCTG
Arabidopsi.thali ---------- -------GGC CGAGGGCACG TCTGC---CT GGGTGTCACA A--------- -------GCG ACCCCAGGTC AGGCGGGATT AC--CCGCTG
Fragaria.anana ---------- --------CG CGAGGGCACG TCTGC---CT GGGCGTCACA C--------- ------CGCG ACCCCAGGTC AGGCGGGGTT AC--CCGCTG
Chlorella.ellip ---------- -------OOO OOOOOOOOOO OOOOO---OO OOOOOOOOOO T--------- ------TTCG ACCTGAGCTC AGGCAAGACT AC--CCGCTG
nEuglena.graci ---------- -------CCC CGAGCTG-CC TGTGC---GC CAGTGTTG-- ---------- -------GTG ACCTGGCG-C ACATGGAATG AC--CCACCG
Entamoeba.histo ---------- --------TC AAGGTATATA TGATA---TT CAATATCC-- ---------- ---------G ATTTGAGT-A TCGTAAGAGG AC--TCCCTT
nTrypanosom.bruce ---------- --GAGCCATC CCCGTGCATG CCACATTTCT CAGTGTCGA- ---------- ------TCAG ACCTGAGT-G TGGCAGGACC AC--CCGCTA
Giardia.intes ---------- ---------- -----GCGCC GCCGC---CT CGGCGCCC-- ---------- -----GCGCG GCCCGAGG-C GGCGGGGGCG AC--GGGCGG
501
Mycobacter.lepra AA-GTGAAAC ATCTCA-GT- ACCCGTAGGA GAA--GAAAA C-AA-TT-GT GAT-TCCGCA AGT---AGT- GGCGAGCGAA CGTGGAAT-- ----------
Streptomyc.grise AA-GTGAAAC ATCTCA-GT- ACCCTCAGGA AGA--GAAAA C-AA-CC-GT GAT-TCCGGG AGT---AGT- GGCGAGCGAA ACTGGATG-- ----------
Bacillus.subti AA-CTGAAAC ATCTAA-GT- ACCCGGAGGA AGA--GAAAG C-AA-AT-GC GAT-TCCCTG AGT---AGC- GGCGAGCGAA ACGGGATC-- ----------
Lactobacil.delbr AA-CTGAAAC ATCTAA-GT- AGCTGCAGGA AGA--GAAAG A-AA-TA-TC GAT-TTCCCA AGT---AGC- GGCGAGCGAA CAGGAAAG-- ----------
Leuconosto.mesen AA-CTGAAAC ATCTCA-TT- AGCAGCAGGA GCA--GAAAG A-AA-AA-TC GAT-TCCCTA AGT---AGC- GGCGAGCGAA CGGGGAAG-- ----------
Staphyloco.aureu AA-CTGAAAC ATCTTA-GT- ACCCGGAGGA AGA--GAAAG A-AA-AT-TC GAT-TCCCTT AGT---AGC- GGCGAGCGAA ACGGGAAG-- ----------
Bartonella.bacil AA-CTGAAAC ATCTAA-GT- ACCTGTAGGA AAG--GACAT C-AA-CC-GA GAC-TCCGTT AGT---AGT- GGCGAGCGAA CGCGGACC-- ----------
Rhodopseud.palus AA-CTGAAAC ATCTAA-GT- ACCTGGAGGA AAG--GACAT C-AA-CC-GA GAC-TCCGCT AGT---AGT- GGCGAGCGAA CGCGTACC-- ----------
Rickettsia.ricke AA-CTGAAAT ATCTAA-GT- AGCTGGAGGA AAG--GACAT C-AA-CC-GA GAC-TCCGTT AGT---AGT- GACGAGCGAA TGCGGACC-- ----------
Bordetella.bronc AA-CTGAAAC ATCTCA-GT- AGCTCGAGGA AAA--GAAAT C-AA-CC-GA GAT-TCCGAA AGT---AGT- GGCGAGCGAA ATCGGAAG-- ----------
Escherichi.coli AA-CTGAAAC ATCTAA-GT- ACCCCGAGGA AAA--GAAAT C-AA-CC-GA GAT-TCCCCC AGT---AGC- GGCGAGCGAA CGGGGAGC-- ----------
Haemophilu.influ AA-CTGAAAC ATCTAA-GT- ACCCCGAGGA AAA--GAAAT C-AA-CC-GA GAT-TTCGTC AGT---AGC- GGCGAGCGAA AGCGAAAG-- ----------
Thermus.therm AA-CTGAAAC ATCTCA-GT- ACCCAGAGGA GAG--GAAAG A-GA-AA-TC GAC-TCCCTG AGT---AGC- GGCGAGCGAA AGGGGACC-- ----------
Thermotoga.marit AA-GTGAAAC ATCTCA-GT- ACCCCGAGGA AAA--GAAAT C-AA-CC-GA GAT-TCCCCT AGT---AGC- GGCGAGCGAA CGGGGAGG-- ----------
Zea.mays.CP AA-CTGAAAC ATCTTA-GT- AGCCAGAGGA AAA--GAAAG C-AA-AA-GC GAT-TCCCGT AGT---AGC- GGCGAGCGAA ATGGGAGC-- ----------
nChlamydomo.reinh.CP AA-CTGAAAC ATCTAA-GT- AGCTGGAGGA AAA--GAAAG C-AA-AC-GC GAT-TCCCGT AGT---AGC- GGCGAGCGAA CCGGGAAC-- ----------
Euglena.graci.CP AA-CTGAAAC ATCTTA-GT- AGCCGAAGGA AAA--GAAAG C-AA-AA-GC GAT-TTTCTT ATT---AGT- GGCGAGCTAA CGGAAATC-- ----------
Desulfuroc.mobil AA-CGGAAAC ATCTTA-GT- AGGGGGAGGA GAA--GAAAC C-AA-AC-GG GAT-CCCCTG AGT---AGG- GGCGACCGAA AGGGGGAC-- ----------
Sulfolobus.acido AA-CGGAAAC ATCTTA-GT- AGGGGGAGGA AAA--GAAAT C-AA-TT-GA GAT-CCCCTG AGT---AGG- GGCGACCGAA AGGGGGAC-- ----------
Thermofilu.pende AA-CGGAAAC ATCTTA-GT- AGGGGGAGGA GAA--GAAAC C-AA-TT-GG GAT-CCCCTG AGT---AGG- G-CGACCGAA AGGGGGAG-- ----------
Thermoprot.tenax AA-AGGAAAC ATCTTA-GT- ACCCGCAGGA AGA--GAAAC C-AA-CA-GG GAA-CCCCTG AGT---AGG- GGCGACCGAA AGGGGGAG-- ----------
Halobacter.halob AA-TTGAAGC ATCTCA-GT- ACGGCCAGGA AGA--GAAAT C-GA-AT-GA GAC-GCCGTT AGT---AAT- GGCGAATGAA CGCGGCAC-- ----------
Halobacter.maris AA-CTGAAAC ATCTCA-GT- ATCGGGAGGA ACA--GAAAA CGCA-AT-GT GAT-GTCGTC AGT---AAC- CGCGAGTGAA CGCGATAC-- ----------
Halococcus.morrh AA-CTGAAAC ATCTCA-GT- ACCGGCAGGA AGA--GAAAC C-GA-AT-GG GAT-GTCGTT ACT---AAC- GGCGAGTGAA CGCGACAC-- ----------
Natronobac.magad AA-CTGAAAC ATCTCA-GT- ATCGGCAGGA AAA--GAAAA CGTA-AT-GT GAT-GTCGTT AGT---ACT- GGCGAAGGAA CGCGATAC-- ----------
Methanococ.vanni GA-TTGAAGC ATCTTA-GT- ACCCGCAGGA AAA--GAAAT C-AA-CT-GA GAT-TCCGTT AGT---AGA- GGCGATTGAA CACGGATC-- ----------
Methanococ.janna AA-AAGAAGC ATCCGA-GT- ACCCGCAGGA AAA--GAAAC C-AA-CA-GG GAT-GCCGGG AGT---AGG- GGCGACCGAA ACCGGCAC-- ----------
Xenopus.laevi AA-TTTAAGC ATATTA-CT- AAGCGGAGGA AAA--GAAAC T-AA-CC-AG GAT-TCCCCC AGT---AAC- GGCGAGTGAA GAGGGAAG-- ----------
Homo.sapie AA-TTTAAGC ATATTA-GT- CAGCGGAGGA AAA--GAAAC T-AA-CC-AG GAT-TCCCTC AGT---AAC- GGCGAGTGAA CAGGGAAG-- ----------
Candida.albic AA-CTTAAGC ATATCA-AT- AAGCGGAGGA AAA--GAAAC C-AA-CA-GG GAT-TGCCTC AGT---AGC- GGCGAGTGAA GCGGCAAA-- ----------
Saccharomy.cerev AA-CTTAAGC ATATCA-AT- AAGCGGAGGA AAA--GAAAC C-AA-CC-GG -AT-TGCCTT AGT---AAC- GGCGAGTGAA GCGGCAAA-- ----------
Schizosacc.pombe AA-CTTAAGC ATATCA-AT- AAGCGCAGGA AAA--GAAAA T-AA-CC-AT GAT-TCCCTC AGT---AAC- GGCGAGTGAA GCGGGAAA-- ----------
Oryza.sativ AG-TTTAAGC ATATAA-AT- AAGCGGAGGA GAA--GAAAC T-TA-CG-AG GAT-TCCCCT AGT---AAC- GGCGAGCGAA CCGGGAGA-- ----------
Arabidopsi.thali AG-TTTAAGC ATATCA-AT- AAGCGGAGGA AAA--GAAAC T-AA-CA-AG GAT-TCCCTT AGT---AAC- GGCGAGCGAA CCGGGAAG-- ----------
Fragaria.anana AA-TTTAAGC ATATCA-AT- AAGCGGAGGA AAA--GAAAC T-TA-CA-AG GAT-TCCCTT AGT---AAC- GGCGAGCGAA CCGGGAAC-- ----------
Chlorella.ellip AA-CTTAAGC ATATCA-AT- AAGCGGAGGA AAA--GAAAC T-AA-CC-AG GAT-TCCCCT AGT---AAC- GGCGAGTGAA CCGGGAAA-- ----------
nEuglena.graci AA-CTTAAGC ATATCA-CT- CAGTGGAGGA ACA--GCAAG C-AA-CC-TC GAT-TGCTGC AGT---AAT- GGCGAATGAA CGAGCAGG-- ----------
Entamoeba.histo AA-CTTAAGC ATATCA-AT- AAGGGAAGGA AGA--AAAAA T-AA-CA-AT GAT-TTCTTA AGT---AAT- GGCGAATGAA AAAGAAAA-- ----------
nTrypanosom.bruce AA-CTTAAGC ATATTA-CT- CAGCGGAGGA AAA--GAAAA C-AA-CC-GT GAT-TCTCTC AGT--CAGC- GGCGAGCGAA GAGGGATTC- ----------
Giardia.intes AA-CTTAAGC ATATCA-GT- ACGCCCCGGA GGA--GAAAC C-AA-CC-GG GAT-TCCCC- -GT---AGC- GGCGAGCGAC GCGGGAGR-- ----------
*************************************************************************************************************
601
Mycobacter.lepra ---------- ---------- ---------- -----ATGGC TA-AACC-GC ACACATGTCT AACTAGGTAG ---------- ---------- ----------
Streptomyc.grise ---------- ---------- ---------- -----A-GGC CA-AACC-GT ATGCGTGTGA TACCCGGCA- ---------- ---------- ----------
Bacillus.subti ---------- ---------- ---------- -----A-GCC CA-AACC-AA GAGG------ -----CTTG- ---------- ---------- ----------
Lactobacil.delbr ---------- ---------- ---------- -----A-GCC CA-AACC-GT CAGA------ -----TTTA- ---------- ---------- ----------
Leuconosto.mesen ---------- ---------- ---------- -----A-GCC CA-AACC-AA CGTG------ -----CTTG- ---------- ---------- ----------
Staphyloco.aureu ---------- ---------- ---------- -----A-GCC CA-AACC-AA CAAG------ -----CTTG- ---------- ---------- ----------
Bartonella.bacil ---------- ---------- ---------- -----A-GGC CA-------- ---------- ---------- ---------- ---------- ----------
Rhodopseud.palus ---------- ---------- ---------- -----A-GGC CA-------- ---------- ---------- ---------- ---------- ----------
Rickettsia.ricke ---------- ---------- ---------- -----A-GGC CA-------- ---------- ---------- ---------- ---------- ----------
Bordetella.bronc ---------- ---------- ---------- -----A-GCC T--------- ---------- ---------- ---------- ---------- ----------
Escherichi.coli ---------- ---------- ---------- -----A-GCC CA-------- ---------- ---------- ---------- ---------- ----------
Haemophilu.influ ---------- ---------- ---------- -----A-GCC AG-------- ---------- ---------- ---------- ---------- ----------
Thermus.therm ---------- ---------- ---------- -----A-GCC TA-AACCGTC CG-G------ -----CTTG- ---------- ---------- ----------
Thermotoga.marit ---------- ---------- ---------- -----A-GCC CA-AACCAGC GT-GGTGTCA AAGCCCGTG- ---------- ---------- ----------
Zea.mays.CP ---------- ---------- ---------- -----A-GCC TA-AACCGT- ---------- -----GAAA- ---------- ---------- ----------
nChlamydomo.reinh.CP ---------- ---------- ---------- -----A-GCC TA-AACCTAT GTC------- -----GCAA- ---------- ---------- ----------
Euglena.graci.CP ---------- ---------- ---------- -----A-GCC TA-AACCT-- ---------- -----TTAT- ---------- ---------- ----------
Desulfuroc.mobil ---------- ---------- ---------- -----A-GCC CA-AACC-AA ATCTCCACGG ----GACGA- ---------- ---------- ----------
Sulfolobus.acido ---------- ---------- ---------- -----A-GCC CA-AACT-AA ACCTGCCGAT ----GATAA- ---------- ---------- ----------
Thermofilu.pende ---------- ---------- ---------- -----A-GCC CA-AACC-GA ACGTCCATGC ----GAAGA- ---------- ---------- ----------
Thermoprot.tenax ---------- ---------- ---------- -----A-GCC CA-AACC-AA ATCCTCACGG ----GATGA- ---------- ---------- ----------
Halobacter.halob ---------- ---------- ---------- -----A-GTC CA-AACC-GA AGCC------ -----TTCG- ---------- ---------- ----------
Halobacter.maris ---------- ---------- ---------- -----A-GCC CA-AACC-GA AGCCC----- -----TCAC- ---------- ---------- ----------
Halococcus.morrh ---------- ---------- ---------- -----A-GTC CA-AACC-GA AGCTTACGGG GC---TTT-- ---------- ---------- ----------
Natronobac.magad ---------- ---------- ---------- -----A-GTC CA-AACC-GA AGCC------ -----TTCG- ---------- ---------- ----------
Methanococ.vanni ---------- ---------- ---------- -----A-GGG CA-AACT-GA ATCCC----- -----TTCG- ---------- ---------- ----------
Methanococ.janna ---------- ---------- ---------- -----A-GGG CA-AACC-GA ATCCC----- -----TATC- ---------- ---------- ----------
Xenopus.laevi ---------- ---------- ---------- -----A-GCC CA-GCGCCGA A-TCCCCGCC CGC--CCG-- ---------- ---------- ----------
Homo.sapie ---------- ---------- ---------- -----A-GCC CA-GCGCCGA A-TCCCCGCC C----CGCG- ---------- ---------- ----------
Candida.albic ---------- ---------- ---------- -----A-GCT CA-AATTTGA AATCTGGCGT C----TTT-- ---------- ---------- ----------
Saccharomy.cerev ---------- ---------- ---------- -----A-GCT CA-AATTTGA AATCTGGTAC C----TTC-- ---------- ---------- ----------
Schizosacc.pombe ---------- ---------- ---------- -----A-GCT CA-AATTTGA AATCTGGCAA CA--TTTCTT T--------- ---------- ----------
Oryza.sativ ---------- ---------- ---------- -----T-GCC CA-GCTTGAG AATCGGGCGG C----CGC-- ---------- ---------- ----------
Arabidopsi.thali ---------- ---------- ---------- -----A-GCC CA-GCTTGAA AATCGGACGT C----TTC-- ---------- ---------- ----------
Fragaria.anana ---------- ---------- ---------- -----G-GCC CA-GCTTGAG AATCTGGCGC C----GCC-- ---------- ---------- ----------
Chlorella.ellip ---------- ---------- ---------- -----A-GCC CA-ACTTGAA AATCTCCAGC C----TTC-- ---------- ---------- ----------
nEuglena.graci ---------- ---------- ---------- -----A-CCC AC-GGCTCTT CCTGAAAATG GGCTTCTCGA TC-------- ---------- ----------
Entamoeba.histo ---------- ---------- ---------- -----A-GAC CA-AGTT-GA TAAGAATGGA TAATTGTAAA A--------- ---------- ----------
nTrypanosom.bruce ---------- ---------- ---------- -----A-ACT CG-TTGCCGA A-TCGGGTCT -----TATA- ---------- ---------- ----------
Giardia.intes ---------- ---------- ---------- -----A-GCC C--GCCCCGA A-G------- -----GCG-- ---------- ---------- ----------
***************************************************
701
Mycobacter.lepra ---------- ---------- ---------- -----GGGTT GTGTG--TGC GGTGTTGT-- GGGATTGGTA TGT------- -CT-CAACTC ----------
Streptomyc.grise ---------- ---------- ---------- -------GTT GCGCA--TGC GG-GTTGT-- GGGATCTCTC TT-------- -TC-ACAGTC ----------
Bacillus.subti ---------- ---------- ---------- ---------- --CCT--CTT GGGGTTGT-- AGGA-CACTC TG-------- ---------- ----------
Lactobacil.delbr ---------- ---------- ---------- ---------- --TCT--GCC GGGGTTGT-- AGGA-CTG-A GA-------- ---------- ----------
Leuconosto.mesen ---------- ---------- ---------- ---------- --CAT--GTT GGGGTTGT-- AGGA-CTG-A ---------- ---------- ----------
Staphyloco.aureu ---------- ---------- ---------- ---------- --CTT--GTT GGGGTTGT-- AGGA-CACTC TA-------- ---------- ----------
Bartonella.bacil ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Rhodopseud.palus ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Rickettsia.ricke ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Bordetella.bronc ---------- ---------- ---------- ---------- ---------- ---------T TACGATTTAG ---------- ---------- ----------
Escherichi.coli ---------- ---------- ---------- ---------- ---------- ---------- GAGC-CTGAA T--------- ---------- ----------
Haemophilu.influ ---------- ---------- ---------- ---------- ---------- ---------- TAAG--TGAT A--------- ---------- ----------
Thermus.therm ---------- ---------- ---------- ---------- ---TCCGGGC GGGGTCGT-- GGGGCCCTC- ---------- -GG-AC---- ----------
Thermotoga.marit ---------- ---------- ---------- ------GGCG TTGCCACGCT GGGGTTGT-- GGGACACGGC C--------- ----GGGCGA GGCCACG---
Zea.mays.CP ---------- ---------- ---------- ---------- --------AC GGGGTTGT-- GGGTGAGC-- ---------- ---------- ----------
nChlamydomo.reinh.CP ---------- ---------- ---------- ---------- ----GATGTA GGGGTCGT-- GGGA------ ---------- ---------- ----------
Euglena.graci.CP ---------- ---------- ---------- ---------- ---------G GGTGTTGT-- GGGTAT---- ---------- ---------- ----------
Desulfuroc.mobil ---------- ---------- ---------- ------CCGT GGAGAGATGT GGGGTTAC-A GGCTCCACGG C--------- -TG-G----- ----------
Sulfolobus.acido ---------- ---------- ---------- ------GTCG GTGGGGATGT GGTGTTAC-G ACCTCTAGCC ---------- TGA-GGTTCG ----------
Thermofilu.pende ---------- ---------- ---------- ------GCAT GGACGGATGT GGGGTTGC-- AGGGCCCCGC GTCCC----- ---------- ----------
Thermoprot.tenax ---------- ---------- ---------- ------CCGT GGGGAGATGT GGTGTTG--- TGGGCTCGGG TACC------ ---------- ----------
Halobacter.halob ---------- ---------- ---------- ---------- --GGCAATGT GGTGTT---- CGGACTGACT TTCAT----- ---------- ----------
Halobacter.maris ---------- ---------- ---------- ---------- -GGGCAATGT GGTGTCA--- GGG-CTACCT CTCAT----- ---------- ----------
Halococcus.morrh ---------- ---------- ---------- ----GCCCCA CGAGCAATGT GGTGTT---- CGGACTGACT CTCAG----- ---------- ----------
Natronobac.magad ---------- ---------- ---------- ---------- --GGCAATGT GGTGTT---- CGGACTGACG ATCAC----- ---------- ----------
Methanococ.vanni ---------- ---------- ---------- ---------- -GGGAGATGT GGTGTTAT-- AGGGCCTTCT TTTC------ ---------- ----------
Methanococ.janna ---------- ---------- ---------- ---------- -CGTAAGGGT AGGGAGAT-- GTGGAGTTGC AGGGCCCCCA ATA-TAG--- ----------
Xenopus.laevi ---------- ---------- ---------- ---GCGGGCG CGGGACGTGT GGCGTAC--- GGGAGACCGG ACC------- ---------- ----------
Homo.sapie ---------- ---------- ---------- -----GGGCG CGGGACATGT GGCGTAC--- GGAAGACCCG CTC------- ---------- ----------
Candida.albic ---------- ---------- ---------- ------GGCG TCCGAGTTGT AATTTGA--- AGAAGGTATC TTT------- ---------- ----------
Saccharomy.cerev ---------- ---------- ---------- ------GGTG CCCGAGTTGT AATTT----- GGAGAGGGCA ACTTT----- ---------- ----------
Schizosacc.pombe ---------- ---------- ---------- -----TGTTG TCCGAGTTGT AATTTCA--- AGAAGCTGCT TTG------- ---------- ----------
Oryza.sativ ---------- ---------- ---------- ------GCCG TCCGAATTGT AGTCTGG--- AGAGGCGTCC TC-------- ---------- ----------
Arabidopsi.thali ---------- ---------- ---------- ------GGCG TTCGAATTGT AGTCTGG--- AGAAGCGTCC TC-------- ---------- ----------
Fragaria.anana ---------- ---------- ---------- ------GCGT GCCGAATTGT AGTCTGG--- AGAAGCGTCC TC-------- ---------- ----------
Chlorella.ellip ---------- ---------- ---------- ------GGCT GGCGAATTGT AGTCTAT--- AGAGGCGTCC TC-------- ---------- ----------
nEuglena.graci ---------- ---------- -GGCTTTCGT TGGAATCCAG CAAACCCTGT GGGCTAT--- GGAGCAGTTG GCTGTGTCTC G--------- ----------
Entamoeba.histo ---------- ---------- ----GGGTTA GAAGAATACA GCAATGTATG AGGCTA---- GTCTTAAATT ATTC------ ---------- ----------
nTrypanosom.bruce ---------- ---------- ---------- ------TGAC CTCGAACTGT GGCACCAT-T TTTGTGGCCG TTCT------ ---------- ----------
Giardia.intes ---------- ---------- ---------- ---------- ----CGCTGT GGGGCGCA-- GGCGCAGGC- ---------- ---------- ----------
801
Mycobacter.lepra ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---TACC--- ---TGGTT-G AG--------
Streptomyc.grise ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---TGCC--- ---GGCTG-T GA--------
Bacillus.subti ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Lactobacil.delbr ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Leuconosto.mesen ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- --------TA
Staphyloco.aureu ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Bartonella.bacil ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Rhodopseud.palus ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Rickettsia.ricke ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Bordetella.bronc ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Escherichi.coli ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Haemophilu.influ ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Thermus.therm ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------A CCG-------
Thermotoga.marit ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----GACT-C GCCGG-----
Zea.mays.CP ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
nChlamydomo.reinh.CP ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Euglena.graci.CP ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Desulfuroc.mobil ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---GGC---- ---------T CGA-------
Sulfolobus.acido ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- -----ACC-T CGGCTT----
Thermofilu.pende ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Thermoprot.tenax ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Halobacter.halob ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Halobacter.maris ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Halococcus.morrh ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Natronobac.magad ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Methanococ.vanni ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Methanococ.janna ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Xenopus.laevi ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Homo.sapie ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Candida.albic ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Saccharomy.cerev ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Schizosacc.pombe ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Oryza.sativ ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Arabidopsi.thali ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Fragaria.anana ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Chlorella.ellip ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
nEuglena.graci ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Entamoeba.histo ---------- ---------- ---------- ---------- ---------- ---------- ---------- --------AG AGTGTAAC-T AATAGAAAAG
nTrypanosom.bruce ---------- ---------- ---------- ---------- ---------- ---------- ---TATAGGG CTGGTGCAGG CGTGGCGG-A ATTCAATTGC
Giardia.intes ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
901
Mycobacter.lepra --GGGTAGTC AGAAAGTGCC GTGGTT-AGC GGAA-ATGGC C--TGGGAT- GGCCT----- ---------- -----GCCGT AGACGG-TGA GAGC-CCAGT
Streptomyc.grise --GGCGAGTC AGAAACCGTT GATGT--AGG CGAA-G-GAC A-TGCGAAA- GGTCC----- ---------- -----GGCGT AGAGGG-TAA GACC-CCCGT
Bacillus.subti -TACGGAGTT ACAAAGGAAC GAGGT--AGA TGAA-GAGGT C--TGGAAA- GGCCC----- ---------- -----GCCAT AGGAGG-TAA CAGC-CCTGT
Lactobacil.delbr -CATGGC--- A--CTTCAG- AGGAT--AGC AGAA-G-CGT T--TGGGAA- AGCGC----- ---------- -----GCCAG AGAGGG-TGA GAGC-CCCGT
Leuconosto.mesen TATAAGAGTT ACAAAAGTGT TTTAT--AGC AGAA-C-AAG T--TGGGAA- ACTTG----- ---------- -----GCTAT AGAGGG-TGA TAGC-CCCGT
Staphyloco.aureu -TACGGAGTT ACAAAGGACG ACATT--AGA CGAA-T-CAT C--TGGAAA- GATGA----- ---------- -----ATCAA AGAAGG-TAA TAAT-CCTGT
Bartonella.bacil --------GT GGCTTAAATT TAGAAA-AGT AGAA-T-CGA T--TGGAAA- GTCGA----- ---------- -----ACCAA AGAGGG-TGA TAGT-CCCGT
Rhodopseud.palus --------GT CATCATTGGA AGACA--ATT GGAA-T-CTG TC-AGGAAA- GCAGA----- ---------- -----GCCTT AGAGGG-TGA TAGC-CCCGT
Rickettsia.ricke --------GT GGCTTCAAAA AAATA--ACT AAAA-C-AAC A--TGGAAA- GGTTG----- ---------- -----ACCAT AGAGGG-TGA TAGT-CCCGT
Bordetella.bronc ---------- -----CATTT TGCAT--AGT CGAA-C-GGA A--TGGAAA- GTCCG----- ---------- -----GCCGT AGCAGG-TGA TAGC-CCTGT
Escherichi.coli ---------- --CAGTGTGT GTGTT--AGT GGAA-G-CGT C--TGGAAA- GGCGC----- ---------- -----GCGAT ACAGGG-TGA CAGC-CCCGT
Haemophilu.influ ---------- ----GCAATA TAGTG--AGG AGAA-T-GTG T--TGGGAA- GCACA----- ---------- -----ATCAA AGAGGG-TGA TAAT-CCCGT
Thermus.therm ---------- ---AATCCCC AGCCT--AGC CGAA-G-CTG T--TGGGAA- GCAGC----- ---------- -----GCCAG AGAGGG-TGA AAGC-CCCGT
Thermotoga.marit ----GGAGTT ACAAATCCCT CCTCT--AGC CGAA-C-CAC C--TGGGAA- GGTGG----- ---------- -----GCCGG AGAGGG-TGA CAGC-CCCGT
Zea.mays.CP -----AATAC AAGCGTTGTG CTGCT--AGG CGAA-G-CGG T--T-GAGT- GCCGC----- ---------- -----ACCCT AGATGG-CTA TAGT-CCAGT
nChlamydomo.reinh.CP ---------- ---------- --------TA CGAA---GCA G--CTGAAT- CCTGC----- ---------- -----ACCAT AGATGG-TGA AAGT-CCAGT
Euglena.graci.CP -----ATTAT AATTACTGAA AAAGA--TAG AGAA---TTT G--TTGAAA- ACAAA----- ---------- -----ATCAA AGAGGGTTTT AAAT-CCCGT
Desulfuroc.mobil --CCCCAG-C AGGCCTACCC ATCGT--AGC CGAA-GTGGC C--TGGAAA- GGCCC----- ---------- -----GCCGT AGAGGG-TGA CAGC-CCCGT
Sulfolobus.acido ---------- --TCCTAACC TATCT--AGC CGAA-CTCCC C--TGGAAC- GGGGG----- ---------- -----CCCAT AGAGGG-TGA AAGC-CCCGT
Thermofilu.pende ---------- --CCCTAGCC CGGAT--AGC CGAA-GTCGG C--TGGAAA- GCCGC----- ---------- -----GCCGT AGAGGG-TGA CAGC-CCCGT
Thermoprot.tenax ---------- --GCCGGCGG GCGGT--AGC CGAA-GTGGG C--TGGAAT- GCCCC----- ---------- -----GCCGT AGAGGG-TGA TAGC-CCCGT
Halobacter.halob ---------- --CGTTTGAC CGTTC--GTG TGAA-GTCTC C--TGAAAC- GGAGC----- ---------- -----GCGAT ACAGGG-TGA CAGC-CCCGT
Halobacter.maris ---------- --CGTCCGAC CATCT--CGA CGAA-GTCTC T--TGGAAC- AGAGC----- ---------- -----GTGAT ACAGGG-TGA CAAC-CCCGT
Halococcus.morrh ---------- --CACCGGAT CGTCT--GTG TGAA-GTCTC C--TGGAAC- GGAGC----- ---------- -----GTGAG ACAGGG-TGA AAAC-CCCGT
Natronobac.magad ---------- --TCTCCGAA ACTCG--ACA CGAA-GTCTC T--TGGAAC- AGAGC----- ---------- -----ACGAG ACAGGG-TGA CAGT-CCCGT
Methanococ.vanni ---------- --GCCTGTTG AGAAA--AGC TGAA-GTTGA C--TGGAAC- GTCAC----- ---------- -----ACTAT AGAGGG-TGA AAGT-CCCGT
Methanococ.janna ---------- --ACCCCCAC TGGGA--AGC CGAA-GTCCC C--TGGAAT- GGGGC----- ---------- -----GCCAT AGAGGG-TGA AAGC-CCCGT
Xenopus.laevi ---------C CCCCGGCGCG GCTCGGGGGC CCAA-GTCCT T--CTGATC- GAGGC-CCAG ---------- -----CCCGC GGACGG-TGT TAGG-CCGGT
Homo.sapie --------CC CGGCGCCGCT CGTGGGGGGC CCAA-GTCCT T--CTGATC- GAGGC-CCAG ---------- -----CCCGT GGACGG-TGT GAGG-CCGGT
Candida.albic ---------- ---GGGC-CC GG-CTCTTGT CTAT-GTTCC T--TGGAAC- AGGAC----- ---------- -----GTCAC AGAGGG-TGA GAAT-CCCGT
Saccharomy.cerev ---------- ---GGGG-CC GT-TCCTTGT CTAT-GTTCC T--TGGAAC- AGGAC----- ---------- -----GTCAT AGAGGG-TGA GCAT-CCCGT
Schizosacc.pombe ---------- ---AGTG-TA GACGATCGGT CTAA-GTTCC T--TGGAAC- AGGAC----- ---------- -----GTCAG AGAGGG-TGA GAAC-CCCGT
Oryza.sativ ---------- ---AGCG-AC GG-ACCGGGC CCAA-GTCCC C--TAGAAA- GGGGC----- ---------- -----GCCTG GGAGGG-TGA GAGC-CCCGT
Arabidopsi.thali ---------- ---AGCG-AC GG-ACCGGGC CTAA-GTTCC C--TGGAAA- GGGGC----- ---------- -----GCCAG AGAGGG-TGA GAG--CCCGT
Fragaria.anana ---------- ---AGCGTAC GGTATCGGGA ACAA-CTCCC ---TGGAA-- -GGGC----- ---------- -----GCCGC AGAGGG-TGA GACCCCCCGT
Chlorella.ellip ---------- ---TGTG-GC TA-ACCGGTC TCAA-GTGCC T--TGGAAA- GGGAC----- ---------- -----GTCAG AGAGGG-TGA GAAC-CCCGT
nEuglena.graci ---------- ----GTGCTT CCCAGTACCA AGAA-GAGTC C--TGGAAT- GGACCC---- ---------- -----ACGAA ACAGGG-AGA CTGT-CCCGT
Entamoeba.histo CTATATTTAA A----AGGGA TAATTTAAAT TGAA-TTCAG A--ACGAAT- ATTGAG---- ---------- ------CCAG AGAGAG-TGA AAGC-CTCGT
nTrypanosom.bruce AAAGCAAACC CGTTGCTGAA CACATTTACA ACCC-TTCAT G--TGAG--- TATTGA---- ---------- -----GCCAA AGAAGG-TGT CAGC-CC-AT
Giardia.intes ---------- ---------- ----CCGCCG CGAG-GGGGC C--CGAG--- GGCCCC---- ---------- -----GCCCG AGAGGG-TGC AAGC-CCCGT
*********************
1001
Mycobacter.lepra A---CGC-GA AAGCCTGGCA CCTGC----- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Streptomyc.grise A---GCT-GA AACATTGACG GCTCG----- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Bacillus.subti A---GTC-AA AACTTCGTTC TCTCC----- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Lactobacil.delbr A---AGC-GA AATCCAAAGA AGGCC----- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Leuconosto.mesen A---AGC-GA AATGAAGCAC ACTCT----- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Staphyloco.aureu A---GTC-GA AAATGTTGTC TCTCT----- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Bartonella.bacil A---TAC-GT AAATCTGATT TAAGTC---- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Rhodopseud.palus A---CAA-GT AATTCAACCA TTGATG---- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Rickettsia.ricke A---TAG-GT AAAAAG-TTT GAAGTC---- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Bordetella.bronc A---GAC-G- AATGC-AGAG TGTGG----- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Escherichi.coli A---CAC-AA AAATG-CACA TGCTG----- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Haemophilu.influ A---TCT-AA AAACC-ATAT TGTGG----- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Thermus.therm A---GGC-GA AAGGTGGGGG GATAG----- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Thermotoga.marit A---GGC-GA AAGGG-GAGG GACTC----- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Zea.mays.CP A---GCC-GA TAGCATCACT -GCTT----- ---------- ---------- ---------- ---------- ---------- ---------- ----------
nChlamydomo.reinh.CP A---GTA--- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Euglena.graci.CP A---TTT-GT TTTTAAAAAG TAATT----- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Desulfuroc.mobil A---GGC-TA AACGATGGGG GCCTG----- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Sulfolobus.acido A---GGC-TA AAGAT--AGG T-GGA----- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Thermofilu.pende A---GGC-TA AATCC--GGG TGGGG----- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Thermoprot.tenax A---GGC-TA AACCG--CCC GTGGC----- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Halobacter.halob A---TCA-CG GACCA--GTA CGACG----- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Halobacter.maris A---CTC-GA GACCA--GTA CGACG----- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Halococcus.morrh A---ACA-CA GACCA--GTA CGGTG----- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Natronobac.magad A---CTG-TC GACGA--GTA AGAGA----- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Methanococ.vanni A---AGCGCA ATCG---ATT CAGGT----- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Methanococ.janna A---GGCGTA ACCA---GTT GGGGG----- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Xenopus.laevi G-GCGGC--- CCCCGGCGCG GCGGG----- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Homo.sapie A-GCGGC--- C-GGCGCGCG CC-------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Candida.albic G--CGAT--- GAGATGACCC GGGTCTG--- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Saccharomy.cerev G--TGGC--- GAGGAGT-GC GGTTCTT--- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Schizosacc.pombe CTTTGGT--- CGATTGGA-- TATGCCA--- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Oryza.sativ C--CGGC--C CGGACC--CT GTCGCCC--- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Arabidopsi.thali C--GTGC--C CGGACC--CT GTCGCAC--- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Fragaria.anana T--GTGC--C CGGACC--CT GTCGCAC--- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Chlorella.ellip C--G-GA--C CGGTGC--AG CTCACTT--- ---------- ---------- ---------- ---------- ---------- ---------- ----------
nEuglena.graci ATGGCTG-AA CCGTGTGCTG GGATCAC--- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Entamoeba.histo C---AATT-- TAGATATATC TTGA------ ---------- ---------- ---------- ---------- ---------- ---------- ----------
nTrypanosom.bruce T---ACATT- CCTTAGCCAC GGAGCCTACG CGCC------ ---------- ---------- ---------- ---------- ---------- ----------
Giardia.intes A---CGGC-- GGCCGC---- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
*
1101
Mycobacter.lepra ---------- ---------- ---------- ---CTTGTAT CA-A-TTCCC GAGTAGCAGC GGG------- ----CCCGTG GAATCTGCTG TGAAT-----
Streptomyc.grise ---------- ---------- ---------- ----TTTGAG AG-A-CACCC AAGTAGCACG GGG------- ----CCCGAG AAATCCCGTG TGAAT-----
Bacillus.subti ---------- ---------- ---------- ------TGAG TG-G-ATCCT GAGTACGGCG GAA------- ----CACGTG AAATTCCGTC GGAAT-----
Lactobacil.delbr ---------- ---------- ---------- ------TATC AG-T-ATCCT GAGTAGGGCG GGA------- ----CACGTG AAATCCCGTT TGAAT-----
Leuconosto.mesen ---------- ---------- ---------- ------TTTC AG-G-ATCCT GAGTACGGCC GGA------- ----CACGTG AAATCCGGTC GGAAT-----
Staphyloco.aureu ---------- ---------- ---------- ------TGAG TG-G-ATCCT GAGTACGACG GAG------- ----CACGTG AAATTCCGTC GGAAT-----
Bartonella.bacil ---------- ---------- ---------- ---------- -------CTT GAGTAAGGCG GGA------- ----CACGTG AAATCCTGTC TGAAC-----
Rhodopseud.palus ---------- ---------- ---------- ---------- -------CTC GAGTAAGGCG GGA------- ----CACGTG AAATCCTGTC TGAAC-----
Rickettsia.ricke ---------- ---------- ---------- ---------- -------CTT GAGTAAGGCG GGA------- ----CACGTG AAATCCTGTC TGAAC-----
Bordetella.bronc ---------- ---------- ---------- ----AACTAG GCGT-AAGAG AAGTAGGGCG GGA------- ----CACGTG AAATCCTGTC TGAAG-----
Escherichi.coli ---------- ---------- ---------- ---------T GAGC-TCGAT GAGTAGGGCG GGA------- ----CACGTG GTATCCTGTC TGAAT-----
Haemophilu.influ ---------- ---------- ---------- ----TACTAA GCTA-ACGAG AAGTAGGGCG GGA------- ----CACGTG ATATCCTGTT TGAAG-----
Thermus.therm ---------- ---------- ---------- ------GTGA GGGT-A-CCC GAGTACCCCG TGG------- ----TTCGTG GAGCCATGGG GGAAT-----
Thermotoga.marit ---------- ---------- ---------- ---CCTGGGC CGTG-CTCCC GAGTACCACG GGA------- ----CACGTG GAATCCCGTG GGAAG-----
Zea.mays.CP ---------- ---------- ---------- ------ACGC TC-T-GACCC GAGTAGCATG GGG------- ----CACGTG GAATCCCGTG TGAAT-----
nChlamydomo.reinh.CP ---------- ---------- ---------- ---------- -----ATCCC GAGTAGCATG GGG------- ----CACGTG AAATCCCGTG TGAAT-----
Euglena.graci.CP ---------- ---------- ---------- -------TTT GATT-TTCCC GAGTAGCATA GAG------- ----CACGTG GAATTCTGTG TGAAT-----
Desulfuroc.mobil ---------- ---------- ---------- -----CGCCG TG---GAGCA GAGTACCACG GC-------- -----TTGGT -TTTGCCGTG GGAAG-----
Sulfolobus.acido ---------- ---------- ---------- ---AAGTGGC TAG--AGGTA GAGTACCATC CC-------- -----CTGGT -TTGGGGGTG GGAAG-----
Thermofilu.pende ---------- ---------- ---------- ---GATGGCG GGTG-TCCCT GAGTACCACG GC-------- -----TTGGT -TTTGCCGTG GGAAG-----
Thermoprot.tenax ---------- ---------- ---------- --GGAGTCCC GGGA-TCCCG GAGTACCCCG CC-------- -----TTGGT -TTTGGCGGG GGAAG-----
Halobacter.halob ---------- ---------- ---------- -----TGCGT CAG--CTCCA GAGTAGCGGG GG-------- -----TTGGA -AATCCCTCG TGAATT----
Halobacter.maris ---------- ---------- ---------- -----TGCGG TAG--TGCCA GAGTAGCGGG GG-------- -----TTGGA -TATCCCTCG CGAAT-----
Halococcus.morrh ---------- ---------- ---------- -----TGCGT CAG--CTCCA GAGTATCGGG GG-------- -----TTGGA -TATCCCTCG TGAAT-----
Natronobac.magad ---------- ---------- ---------- -----CGAGT CAG--CTCCA GAGTATCGGG GG-------- -----TTGGA -TATCCCTCG TGAAT-----
Methanococ.vanni ---------- ---------- ---------- ------TTGA AGTG-TCCCT GAGTACCGTG CG-------- -----TTGGA -TATCGCGCG GGAAT-----
Methanococ.janna ---------- ---------- ---------- ----TC-TGG GGTG-TCCCT GAGTACCGCG CG-------- -----TTGGA -TATCGCGCG GGAAG-----
Xenopus.laevi ---------- ---------- ---------- ----ACCCGG TCT--CCTCG GAGTCGGGTT GT-------- -----TTGGG -AATGCAGCC CAAAG-----
Homo.sapie ---------- ---------- ---------- ------CGGG TCT--TCCCG GAGTCGGGTT GC-------- -----TTGGG -AATGCAGCC CAAAG-----
Candida.albic ---------- ---------- ---------- -TGTAAAGTT CCT--TTGAC GAGTCGAGTT GT-------- -----TTGGG -AATGCAGCT CTAAG-----
Saccharomy.cerev ---------- ---------- ---------- -TGTAAAGTG CCT--TCGAA GAGTCGAGTT GT-------- -----TTGGG -AATGCAGCT CTAAG-----
Schizosacc.pombe ---------- ---------- ---------- -TATAAAGCG CTT--TCGAA GAGTCGAGTT GT-------- -----TTGGG -AATGCAGCT CTAAA-----
Oryza.sativ ---------- ---------- ---------- --CACGAGGC GCCG-TCAAC GAGTCGGGTT GT-------- -----TTGGG -AATGCAGCC CAAAT-----
Arabidopsi.thali ---------- ---------- ---------- --CACGAGGC GCTG-TCTAC GAGTCGGGTT GT-------- -----TTGGG -AATGCAGCC CCAAT-----
Fragaria.anana ---------- ---------- ---------- --CACGAGGC GCTG-TCGGC GAGTCGGGTT GT-------- -----TTGGG -AATGCAGCC CCAAT-----
Chlorella.ellip ---------- ---------- ---------- --CACGAGGC GCTT-TCGCA GAGTCGGGTT GT-------- -----TTGGG -AATGCAGCC CTAAG-----
nEuglena.graci ---------- ---------- -----TGGGA TGTGGCTGGC TGTA-TCCCC GAGTAGAGTG GC-------- -----TTGGG -ACTGCAGTT TGAAG-----
Entamoeba.histo ---------- ---------- ---------A AAGAATATGG TTTA-GAAAA GAGTAAATTT AT-------- -----TTGGA -AGTATAAAT CGAA------
nTrypanosom.bruce ---------- ---------- ---------T CCTCATGTTC GGTC-CAAGA GAGTAGCACT GT-------- -----TTGGG -AATGCAGTG TCAAGC----
Giardia.intes ---------- ---------- ---------- -----CGGGC CTGC-GCGGC GAGTAGCGCT GC-------- -----TTGAG -CGTGCAGCG CGAA------
******* **************************
1201
Mycobacter.lepra --CTGCCGGG -ACCAC-CCG GTAAGCCTA- AATACTT--C TCGATGA-CC GATAGCGGAT ----CAGTAC CGTGA-GGGA AT-GGT-GAA A-AGTACCCC
Streptomyc.grise --CTGGCGGG -ACCAC-CCG CTAAGCCTA- AATATTC--C CTGGTGA-CC GATAGCGGA- ----TAGTAC CGTGA-GGGA AT-GGT-GAA A-AGTACCGC
Bacillus.subti --CCGGGAGG -ACCAT-CTC CCAAGGCTA- AATACTC--C CTAGTGA-CC GATAGTGAAC ----CAGTAC CGTGA-GGGA AA-GGT-GAA A-AGCACCCC
Lactobacil.delbr --CCGCGAGG -ACCAT-CTC GCAAGGCTA- AATACTA--A CCAGTGA-CC GATAGTGAAC ----CAGTAC CGTGA-GGGA AA-GGT-GAA A-AGAACCCC
Leuconosto.mesen --CTGCGGGG -ACCAT-CCC GTAAGGCTA- AATACTC--C CTAGTGA-CC GATAGTGAAC ----CAGTAC CGTGA-GGGA AA-GGT-GAA A-AGCACCCC
Staphyloco.aureu --CTGGGAGG -ACCAT-CTC CTAAGGCTA- AATACTC--T CTAGTGA-CC GATAGTGAAC ----CAGTAC CGTGA-GGGA AA-GGT-GAA A-AGCACCCC
Bartonella.bacil --ATGGGTCG -ACCAC-GAT CCAAGCCTA- AGTACTC--G TGCATGA-CC GATAGCGCAC ----CAGTAC CGTGA-GGGA AA-GGT-GAA A-AGTACCCC
Rhodopseud.palus --ATGGGGGG -ACCAC-CCT CCAAGCCTA- AGTACTC--C TCAGCGA-CC GATAGTGAAC ----CAGTAC CGTGA-GGGA AA-GGT-GAA A-AGCACCCC
Rickettsia.ricke --ATAGGGGG -ACCAC-CCT CTAAGCCTA- AGTACTC--T CTAGTGA-CC GATAGTGAAC ----AAGTAC CGTGA-GGGA AA-GGT-GAA A-AGTACCCC
Bordetella.bronc --ATGGGGGG -ACCAT-CCT CCAAGGCTA- AATACTC--G TGATCGA-CC GATAGTGAAC ----CAGTAC CGTGA-GG-A AA-GGC-GAA A-AGAACCCC
Escherichi.coli --ATGGGGGG -ACCAT-CCT CCAAGGCTA- AATACTC--C TGACTGA-CC GATAGTGAAC ----CAGTAC CGTGA-GGGA AA-GGC-GAA A-AGAACCCC
Haemophilu.influ --AAGGGGGG -CCCAT-CCT CCAAGGCTA- AATACTC--C TGATTGA-CC GATAGTGAAC ----CAGTAC TGTGA-AGGA AA-GGC-GAA A-AGAACCCC
Thermus.therm --CTGGGCGG -ACCACCGGC CTAAGGCTA- AGTACTC--- CGGGTGA-CC GATAGCGCAC ----CAGTAC CGTGA-GGGA AA-GGT-GAA A-AGAACCCC
Thermotoga.marit --CTGGGGGG -ACCAC-CCT CCAAGGCTA- AATACTA--C CCGCCGT-CC GATAGCGCAC ----CAGTAC CGTGA-GGGA AA-GGT-GAA A-AGCACCCC
Zea.mays.CP --CAGCAAGG -ACCAC-CTT GCAAGGCTA- AATACTC--C TGGGTGA-CC GATAGCGAAG ----TAGTAC CGTGA-GGGA AA-GGT-GAA A-AGAACCCC
nChlamydomo.reinh.CP --CAGCGAGG -ACCAC-CTC GTAAGGCTA- AATACTC--C TGAGTGA-CC GATAGCGAAA ----TAGTAC CACGA-GGGA AA-GGT-GAA A-AGAACCCC
Euglena.graci.CP --CAGCGAGG -ACCAT-CTC GTAAGGCTA- AATACTC--C TAAATGA-CC GATAGTGTAC ----GAGTAC CGTGA-GGGA AA-GCT-GAA ATAGAACACT
Desulfuroc.mobil --TCGGGGGT CACCGA-CCT CCAAGGCTA- AATACGT--- CCCGAGA-CC GATAGCGTAC T---AAGTAC CGTGA-GGGA AA-GCT-GAA A-AGCACCCC
Sulfolobus.acido --TTAGGGGA CACGTG-CCT CTAAGGCTA- AATATGT--- CCCGAGA-CC GATAGCAAAC T---AAGTAC CGTGA-GGGA AA-GCT-GAA A-AGAACCCC
Thermofilu.pende --CTGGGGGG CACCGA-CCT CCAAGGCTA- AATACGT--- CCCGAGA-CC GATAGCGAAC T---AAGTAC CGTGA-GGGA AA-GCT-GAA A-AGCACCCC
Thermoprot.tenax --CTGGCGGC CACTGG-CCG CCAAGGCTA- AGCACGT--- CCCGAGT-CC GATAGCGAAC T----AGTAC CGTGA-GGGA AA-GCT-GAA A-AGCACCCC
Halobacter.halob --GTGGCAGG CATCGA-CTG CCAAGACTA- AGTACTC--- TCCGAGA-CC GATAGTGAAC A----AGTAG TGTGA-ACGA AC-GCT-GAA A-AGCACCCC
Halobacter.maris --AACGCAGG CATCGA-CTG CGAAGGCTA- AACACAA--- CCTGAGA-CC GATAGTGAAC A----AGTAG TGTGA-ACGA AC-GCT-GCA A-AGTACCCT
Halococcus.morrh --ATGGCCGG CATCGA-CGG CCAAGACTA- AACACAT--- CTCGAGA-CC GATAGTGAAC A----AGTAG CGTGA-CGGA AC-GCT-GAA A-AGCACCCC
Natronobac.magad --ATCCCAGG CATCGA-CTG GGAAGACTA- AACACTC--- CTCAAGA-CC GATAGCGAAC A----AGTAG TGTGA-ACGA AC-GCT-GAA A-AGCACCCC
Methanococ.vanni --TTGGGAGG CATCAA-CTT CCAACTCTA- AATACGT--- TTCAAGA-CC GATAGCGTAC T----AGTAC CGCGA-GGGA AA-GCT-GAA A-AGCACCCT
Methanococ.janna --CTGGGAGA CATTAGGCTT CCAACCCTA- AATACGT--- CCCGAGA-CC GATAGCGAAC T----AGTAC CGTGA-GGGA AA-GCT-GAA A-AGCACCCC
Xenopus.laevi --CGGGTGGT AAACTC-CAT CTAAGGCTA- AATACCG--G CACGAGA-CC GATAGCGGAC ----AAGTAC CGTAA-GGGA AA-GTT-GAA A-AGAACTTT
Homo.sapie --CGGGTGGT AAACTC-CAT CTAAGGCTA- AATACCG--G CACGAGA-CC GATAGTCAAC ----AAGTAC CGTAA-GGGA AA-GTT-GAA A-AGAACTTT
Candida.albic --TGGGTGGT AAATTC-CAT CTAAAGCTA- AATATTG--G CGAGAGA-CC GATAGCGAAC ----AAGTAC AGTGA-TGGA AA-GAT-GAA A-AGAACTTT
Saccharomy.cerev --TGGGTGGT AAATTC-CAT CTAAAGCTA- AATATTG--G CGAGAGA-CC GATAGCGAAC ----AAGTAC AGTGA-TGGA AA-GAT-GAA A-AGAACTTT
Schizosacc.pombe --TGGGTGGT AAATTT-CAT CTAAAGCTA- AATATTG--G CGAGAGA-CC GATAGCGAAC ----AAGTAG AGTGA-TCGA AA-GAT-GAA A-AGAACTTT
Oryza.sativ --CGGGCGGT AAACTC-CGT CCAAGGCTA- AATACAG--G CGAGAGA-CC GATAGCGAAC ----AAGTAC CGCGA-GGGA AA-GAT-GAA A-AGGACTTT
Arabidopsi.thali --CGGGCGGT AAATTC-CGT CCAAGGCTA- AATACGG--G CGAGAGA-CC GATAGCGAAC ----AAGTAC CGCGA-GGTA AA-GAT-GAA A-AGGACTTT
Fragaria.anana --AGGGCGGT AAATTC-CGT CCAAGGCTA- AATACGG--G CGAGAGA-CC GATAGCAAAC ----AAGTAC CGCGA-GGGA AA-GAT-GAA A-AGGACTTT
Chlorella.ellip --CAGGTGGT AAATCC-CAT CTAAGGCTA- AATACTG--G CGGGAGA-CC GATAGCGAAC ----AAGTAC CGTGA-GGGA AA-GAT-GAA A-AGAACTTT
nEuglena.graci --AGTGACGT GTATCC-GTC ACAAGGTGG- CATACAG--A CCTGGGA-CC GATAGTGCAC ----AAGTAG AGTGA-TCGA AG-GAT-GCA A-AGAACTCC
Entamoeba.histo --AAGGTGAT AGTATT-CAT CAAAGTCTA- AATATTA--C AGGAAAA-CT GATAGCAAAG ----AAGTAC TGTGA-AGGA AA-ACT-TAA A-AGAACTTT
nTrypanosom.bruce --CGGCAGGT ATTTGT-CTG CCAAGGTTA- AATATAGAGT AGGAAGA-CC GATAGCGAAC ----AAGTAG CGTGA-GCGA AA-GTTTGAA A-AGTACTTT
Giardia.intes ---GGGAGGC GCGGCC-CTT CCAAGGCTA- AATA-CG--C CCCGGGA-CC GATAGCGGAC C---AAGTAG CGCGA-GCVA AC-GGT-GAA A-AGGACGCC
************************************* *********************************************************
1301
Mycobacter.lepra G-GGA-GGGG A--GTG--AA ATAGTACCTG AAA-CCG--- TGTGCCTACA AT-CCGTCAG AGCCTC---- ---------- ---------- ----------
Streptomyc.grise G-GGA-GCGG A--GTG--AA ATAGTACCTG AAA-CCG--- TGTGCCTACA AG-CCGTGGG AGCGTCGCTG GCAGCA---- ---------- ----------
Bacillus.subti G-GAA-GGGG A--GTG--AA AGAGATCCTG AAA-CCG--- TGTGCCTACA AG-TAGTCAG AGCCCG---- ---------- ---------- ----------
Lactobacil.delbr G-GGA-GGGG A--GTG--AA AGAGAACCTG AAA-CCG--- TGTGCCTACA AG-TAGTCAG AGCCCG---- ---------- ---------- ----------
Leuconosto.mesen G-GAA-GGGG A--GTG--AA ATAGTTCCTG AAA-CCA--C GACGCCTACA AG-AAGTCAG AGCCCG---- ---------- ---------- ----------
Staphyloco.aureu G-GAA-GGGG A--GTG--AA ATAGAACCTG AAA-CCG--- TGTGCTTACA AG-TAGTCAG AGCCCG---- ---------- ---------- ----------
Bartonella.bacil GACGA-GGGG A--GTG--AA ATAGTACCTG AAA-CCG--- AATGCCTACA AA-CAGTCGG AGCCCAAGAT T--------- ---------- ----------
Rhodopseud.palus GACGA-GGGG A--GTG--AA ATAGTTCCTG AAA-TCG--- GACACCTACA AA-CAGACGG AGCCCAAGAT A--------- ---------- ----------
Rickettsia.ricke GACAA-GGGG A--GTG--AA ATAGTATCTG AAA-CCA--- AATGCTTACA AG-CAGTCGG AGCAAGCGTA T--------- ---------- ----------
Bordetella.bronc G--GA-A-GG A--GTG--AA ATAGATCCTG AAA-CCG--- TATGCATACA A--CAGTCGG AGCCTC---- ---------- ---------- ----------
Escherichi.coli GGCGA-GGGG A--GTG--AA AAAGAACCTG AAA-CCG--- TGTACGTACA AG-CAGTGGG AGCACGC--- ---------- ---------- ----------
Haemophilu.influ GGTGA-GGGG A--GTG--AA ATAGAACCTG AAA-CCT--- TGTACGTACA AG-CAGTGGG AGCGAGG--- ---------- ---------- ----------
Thermus.therm G-GGA--GGG A--GTG--AA ATAGAGCCTG AAA-CCG--- TGGGCTTACA AG-CAGTCAC GGCCCC---- ---------- ---------- ----------
Thermotoga.marit G-GAA-GGGG A--GTG--AA AGAGGACCTG AAA-CCG--- CGTGCCTACA AG-AAGTCGG AGCCCCC--- ---------- ---------- ----------
Zea.mays.CP C-AGT-GGGT A--GTG--AA ATAGAACGTG AAA-CCGTGC TGAGCTCCCA AG-CAGTGGG AGGGGA---- ---------- ---------- ----------
nChlamydomo.reinh.CP T-GTT-GGGG A--GTG--AA ATAGAACATG AAA-CCG--- TATGCTGACA AG-CAGTGGG AGCAAG---- ---------- ---------- ----------
Euglena.graci.CP G-AGA-AGTG A--GTG--AA ATAGAATATG AAA-GCA--- TAAGTTTACA AG-CAGTAGG AGATCT---- ---------- ---------- ----------
Desulfuroc.mobil GCAAG-GGGG ---GTG--AA A-AGAGCCTG AAA-CCG--- GGCGGCTACA T--ACGGCAC GGCCCTCAAG GAGTG--AAG CCCGCTAAAG GAAACCGGG-
Sulfolobus.acido GGAAG-GGGG A--GTG--CC AAAGAGCCTG AAA-CCG--- GGTGGTTATA C--AGGGTGT GGCTCGAAAG AAGTG--AAC CCTTCCGAAG GAAAGGGC--
Thermofilu.pende GGAAG-GGGG ---GTG--AA A-AGAGCCTG AAA-CCG--- GGTGGCGACA G--GTGGCGC GGCCCGAAAG GGTAG--ATC CTCCCCGAAG GAAACCCGG-
Thermoprot.tenax GGAAG-GGGG ---GTG--AA A-AGAGCCTG AAA-CCG--- GGCGGCTACA G--TGGGGCG GGCCCCAAAG GA-TG--CCC TCGCCCGAAG GAAACCCCG-
Halobacter.halob ACAAA-GGGG G--GTG--AA ATAGGGCTTG AAA-TCA--- GGTGGCGATG GA-GCGACGG GGCATAAAAG G------CCT CTCTGGGAAC GACTTGAGT-
Halobacter.maris CAGAA-GGGA G--GCG--AA ATAGAGCATG AAA-TCA--- GTTGGCGATC GA-GCGACAG GGCATACAAG G------TCC CTTGACGAAT GACCGAGAC-
Halococcus.morrh ACAAA-GGGA G--GTG--CA ATAGGGCTTG AAC-TCA--- GTTGGCGATC GA-GCGACGG GGCATAAAAG G------CGT CTTAGTGAAC GACCCGGGG-
Natronobac.magad ACAAA-GGGA G--GTG--CA ATAGGGCGTG AAA-TCA--- GTTGGCGATA GA-GCGACAG AGCATACAAG G------TCC GCCGAGTAAC GACCGAGAC-
Methanococ.vanni T-AAC-AGGG T--GTG--AA A-AGAGCCTG AAA-CCA--- GGTAGGTATG GA-ATGGCGT GGCCCCAAAG GC-----AAC TGTTCTGAAG GAAACCGTC-
Methanococ.janna T-TGC-GGGG G--GTG--AA A-AGAGCCTG AAA-CCA--- GGTGGGTACG GA-ATGGCAC GGCCCGAAAG GT-----AAC CACCCCGAAG GAAACTCCC-
Xenopus.laevi GA-AG-AGAG A--GTT--CA AGAGGGCGTG AAA-CCG--- TTAAGAGGTA AA---CGGGT GGGGTCCGTG CGG----TCC GCCCGGAGGA TTCAACCC-G
Homo.sapie GA-AG-AGAG A--GTT--CA AGAGGGCGTG AAA-CCG--- TTAAGAGGTA AA---CGGGT GGGGTCCGCG CAG----TCC GCCCGGAGGA TTCAACCC-G
Candida.albic GA-AA-AGAG A--GTG--AA AAAGTACGTG AAA-TTG--- TTGAAAGGGA AG---GGCTT GAGATCAGAC TTG-----GT ATTTTG-CAT GC-TGCTCTC
Saccharomy.cerev GA-AA-AGAG A--GTG--AA AAAGTACGTG AAA-TTG--- TTGAAAGGGA AG---GGCAT TTGATCAGAC ATG-----GT GTTTTGTGCC CTCTGCTCCT
Schizosacc.pombe GA-AA-AGAG A--GTT--AA ATAGTACGTG AAA-TTG--- CTGAAAGGGA AG---CATTG GAAATCAGTC TTAC---CTG GGTGAGATCA GTAGTCTCTT
Oryza.sativ GA-AA-AGAG A--GTC--AA AGAGTGCTTG AAA-TTG--- CCGGGAGGGA AG---CGGAT GGGGGCCGGC GAT--GCCCC GGCCGTATGC GGAACGGC-T
Arabidopsi.thali GA-AA-AGAG A--GTC--AA AGAGTGCTTG AAA-TTG--- TCGGGAGGGA AG---CGGAT GGGGGCCGGC GATGCGTCCT GGTCGGATGC GGAACGGA-G
Fragaria.anana GA-AA-AGAG A--GTC--AA AGAGTGCTTG AAA-TTG--- TCGGGAGGGC AA---AGCCG ATGGGCCGGC GATGCGCCCC GGTCGGATGT GGAACGGT-C
Chlorella.ellip GA-AA-AGAG A--GTT--AA ACAGTACTTG AAA-TTG--- TTGAGAGGGA AG---AGATT GGAAGTCGCG GGTGCGCCCA GGCTT-ATGC ACGCC----T
nEuglena.graci GC-GA-AGAG G--GTT---A AAAGTCCCTG AAG-CCG--- CAACAGGATC GG---TGGTG TGCAGTGCTG TA---TC-TG ACCAAGCGTC TCTGGGTCAG
Entamoeba.histo GG-AA-AAAG ---AGT--GA AAAGAGCTTG AAA-GAG--- TAATATGTGA AC---GGATA A-TTTATAAG AAAAATAGTG GAATATGTTA TAAATAAAGA
nTrypanosom.bruce GG-AA-AGAG A--GTG--AC ATAGAACCTG AAA-TCG--T GACAACGACA AT---GGAAG TACC-TCCAT TTC------- ---------- ------TTTT
Giardia.intes CT-GC-GGCC ---GCT--CA AAAGA-CCTG AAC-CCG--- GCCGGCCG-- -----CCGGC ---------- ---------- ---------- ----------
**************************
1401
Mycobacter.lepra ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Streptomyc.grise ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Bacillus.subti ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Lactobacil.delbr ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Leuconosto.mesen ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Staphyloco.aureu ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Bartonella.bacil ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Rhodopseud.palus ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Rickettsia.ricke ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Bordetella.bronc ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Escherichi.coli ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Haemophilu.influ ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Thermus.therm ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Thermotoga.marit ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Zea.mays.CP ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
nChlamydomo.reinh.CP ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Euglena.graci.CP ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Desulfuroc.mobil ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Sulfolobus.acido ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Thermofilu.pende ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Thermoprot.tenax ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Halobacter.halob ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Halobacter.maris ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Halococcus.morrh ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Natronobac.magad ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Methanococ.vanni ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Methanococ.janna ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Xenopus.laevi GCGGGTCAGC GCCGGCCGGA CCGGGCCACT CGGCGGACCC CCCCGCCGGC CCCCTCCCCT CGCC------ ---------- ---------- ----------
Homo.sapie GCGGCGGGTC C--GGCCGTG TCGGCGG-CC CGGCGGATCT TTCCCGCCCC CCGTTCCTCC CGACCCCTCC ACCCGCCCTC CCTTCC-CCC GCCGCCCCTC
Candida.albic TCGGGGGCGG CCGCT----- -GCGGTTTAC CGGGCCAGCA TCGGTTTGGA GCGGCAGGAT AATGGCGGAG GAA-TGTGGC ACGGC----- ----------
Saccharomy.cerev TGTGGGTAGG GGAA---TCT CGCATTTCAC TGGGCCAGCA TCAGTTTTGG T-GGCAGGAT AAATCCATAG GAA-TGTAGC TTGC------ ----------
Schizosacc.pombe CGCGAGACTA TGCA--CTCT GAACCTGTGG TAGGTCAGCA TCAGTTTTCG GGGGCGGAAA AAGAATAAGG GAA-GGTGGC TTTCCGGGT- ----------
Oryza.sativ TCGGCTGGTC CGTCGATCGG CTCGGGGCGT GGACTGTTGT CGGCCGCGCC GGCGGCCAAA GCCCGGGGGC ---------- ---------- ----------
Arabidopsi.thali CAATCCGGTC CGCCGATCGA TTCGGGGCGT GGACCGACGC GGATTACGGT GGCGGCCTAA GCCCGGGCTT ---------- ---------- ----------
Fragaria.anana ACAGCCGGTC CGCCGCTCGA CTCGGGGCGT GGACCGTTGC GGATTGCGGC GGCGGCCAAA GCCCGGGCTG ---------- ---------- ----------
Chlorella.ellip CAC---GGCG TGCTGTATGT GC-----TGG GCGCTGGTCA GCATC-GATT CGCAGGCTCG TACAACAGCG GAGG-TTGAT ACTCCGT--- ----------
nEuglena.graci CCCAGGGCTG GCCAC-CGAG CCCCTGTCTC CGGACAGGGA TGACTATCGT GGCAGCCCCG TGGTGGCAGC TCCGCCTGCC AGGACCTGGA GTTTG-TCGC
Entamoeba.histo TGTGAAAAGA TTAGATATAT ATAAGTAGTA TATTTAATAA GATTATGTTG AAATTTATAA TATAAGAAAT TATTAAGAGC AAGAGAATTA TTTCATTTAT
nTrypanosom.bruce TTTTACGGCC AGACCCAACC TCGCCGCGCA ATTTCCTTCC GGGGTTCAAC ATCCGGTGGG --CCTTCACT ---GTGCGGG TTTCTCTTTT GAGGTCATGG
Giardia.intes ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
1501
Mycobacter.lepra ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Streptomyc.grise ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Bacillus.subti ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Lactobacil.delbr ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Leuconosto.mesen ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Staphyloco.aureu ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Bartonella.bacil ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Rhodopseud.palus ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Rickettsia.ricke ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Bordetella.bronc ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Escherichi.coli ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Haemophilu.influ ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Thermus.therm ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Thermotoga.marit ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Zea.mays.CP ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
nChlamydomo.reinh.CP ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Euglena.graci.CP ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Desulfuroc.mobil ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Sulfolobus.acido ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Thermofilu.pende ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Thermoprot.tenax ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Halobacter.halob ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Halobacter.maris ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Halococcus.morrh ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Natronobac.magad ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Methanococ.vanni ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Methanococ.janna ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Xenopus.laevi ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----GGGAGG
Homo.sapie CTCCTCCTCC CCG------- ---------- ---------- ---------- --GAGGGGGC GGGCTCCGGC GGGTG-CGGG GGTGGGCGGG CGGGGCCGGG
Candida.albic ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Saccharomy.cerev ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Schizosacc.pombe ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Oryza.sativ ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Arabidopsi.thali ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Fragaria.anana ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Chlorella.ellip ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
nEuglena.graci TGGTGGTTGG GCTGG----- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Entamoeba.histo AGTGATTATT AATAAACGAG GATATTAGGA GAAATCTTAG TATTCAATTG TGAATTAAAA GTAAAAAT-- ---------- ---------- ----------
nTrypanosom.bruce GGTGCGTGAG -TGGGCGGAA TAAAGGGTCG GTGTGTTGTG TGTGGGTTTT TTCTC----- ---------- ---------- ---------- ----------
Giardia.intes ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
1601
Mycobacter.lepra ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Streptomyc.grise ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Bacillus.subti ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Lactobacil.delbr ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Leuconosto.mesen ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Staphyloco.aureu ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Bartonella.bacil ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Rhodopseud.palus ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Rickettsia.ricke ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Bordetella.bronc ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Escherichi.coli ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Haemophilu.influ ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Thermus.therm ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Thermotoga.marit ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Zea.mays.CP ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
nChlamydomo.reinh.CP ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Euglena.graci.CP ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Desulfuroc.mobil ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Sulfolobus.acido ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Thermofilu.pende ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Thermoprot.tenax ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Halobacter.halob ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Halobacter.maris ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Halococcus.morrh ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Natronobac.magad ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Methanococ.vanni ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Methanococ.janna ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Xenopus.laevi GCGGTCGCGC GGGGGGGAC- GCGGCCCGGG -CGGC-CCCG GCGCCCGCAG GGCGCATTTC CTCCGCGGCG GTGCGCCGCG ACCGGCTCCG GGCCGGCTGG
Homo.sapie GGTGGGGTCG GCGGGGGACC GTCCCCCGGA CCGGCGACCG GCCGCCGCCG GGCGCATTTC CA----GGCG GTGCGCCGCG ACCGGCTCCG GGACGGCTGG
Candida.albic ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Saccharomy.cerev ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Schizosacc.pombe ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Oryza.sativ ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Arabidopsi.thali ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Fragaria.anana ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Chlorella.ellip ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
nEuglena.graci ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Entamoeba.histo ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
nTrypanosom.bruce ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Giardia.intes ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
1701
Mycobacter.lepra ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Streptomyc.grise ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Bacillus.subti ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Lactobacil.delbr ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Leuconosto.mesen ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Staphyloco.aureu ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Bartonella.bacil ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Rhodopseud.palus ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Rickettsia.ricke ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Bordetella.bronc ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Escherichi.coli ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Haemophilu.influ ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Thermus.therm ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Thermotoga.marit ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Zea.mays.CP ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
nChlamydomo.reinh.CP ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Euglena.graci.CP ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Desulfuroc.mobil ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Sulfolobus.acido ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Thermofilu.pende ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Thermoprot.tenax ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Halobacter.halob ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Halobacter.maris ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Halococcus.morrh ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Natronobac.magad ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Methanococ.vanni ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Methanococ.janna ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Xenopus.laevi GAAGGCCCAG GGGTTCAGGG GAAGGTGGCC GGCCGCCCCC GCGCGGCCGG CGTTACAGCC CCCCCCCAGG CAGCAGCACT CGCCGTCGCC CGGGGCCGAG
Homo.sapie GAAGGCCCGG C------GGG GAAGGTGGCT CGGGGGGCCC CGTCCGTCCG TCCGTCC--- -------TCC TCCTCCCCCG TCTCCGCCCC CCGGCCCCGC
Candida.albic ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Saccharomy.cerev ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Schizosacc.pombe ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Oryza.sativ ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Arabidopsi.thali ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Fragaria.anana ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Chlorella.ellip ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
nEuglena.graci ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Entamoeba.histo ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
nTrypanosom.bruce ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Giardia.intes ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
1801
Mycobacter.lepra ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Streptomyc.grise ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Bacillus.subti ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Lactobacil.delbr ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Leuconosto.mesen ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Staphyloco.aureu ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Bartonella.bacil ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Rhodopseud.palus ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Rickettsia.ricke ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Bordetella.bronc ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Escherichi.coli ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Haemophilu.influ ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Thermus.therm ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Thermotoga.marit ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Zea.mays.CP ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
nChlamydomo.reinh.CP ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Euglena.graci.CP ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Desulfuroc.mobil ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Sulfolobus.acido ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Thermofilu.pende ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Thermoprot.tenax ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Halobacter.halob ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Halobacter.maris ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Halococcus.morrh ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Natronobac.magad ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Methanococ.vanni ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Methanococ.janna ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Xenopus.laevi GGAGACGACC GCCTCCGCGG -CCTCCTCCC CGGAAC-CGT CCCG------ ---------- ---------- ---------- ---------- ----------
Homo.sapie GTCCTCCCTC GGGAGGGCGC GCGGGTCGGG GCGGCGGCGG CGGCGGCGGT GGCGGCGGCG GCGGGGGCGG CGGGACCGAA ACCCCCCCCG AGTGTTACAG
Candida.albic ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Saccharomy.cerev ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Schizosacc.pombe ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Oryza.sativ ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Arabidopsi.thali ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Fragaria.anana ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Chlorella.ellip ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
nEuglena.graci ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Entamoeba.histo ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
nTrypanosom.bruce ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Giardia.intes ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
1901
Mycobacter.lepra ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Streptomyc.grise ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Bacillus.subti ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Lactobacil.delbr ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Leuconosto.mesen ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Staphyloco.aureu ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Bartonella.bacil ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Rhodopseud.palus ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Rickettsia.ricke ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Bordetella.bronc ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Escherichi.coli ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Haemophilu.influ ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Thermus.therm ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Thermotoga.marit ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Zea.mays.CP ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
nChlamydomo.reinh.CP ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Euglena.graci.CP ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Desulfuroc.mobil ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Sulfolobus.acido ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Thermofilu.pende ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Thermoprot.tenax ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Halobacter.halob ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Halobacter.maris ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Halococcus.morrh ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Natronobac.magad ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Methanococ.vanni ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Methanococ.janna ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Xenopus.laevi ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Homo.sapie CCCCCCCGGC AGC-AGCACT CGCCGAATCC CGGGGCCGAG GGAGCGAGAC CCGTCGCCGC GCTCTCCCCC CTCCCGGCGC CCACCCCCGC GGGAA--TCC
Candida.albic ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Saccharomy.cerev ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Schizosacc.pombe ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Oryza.sativ ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Arabidopsi.thali ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Fragaria.anana ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Chlorella.ellip ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
nEuglena.graci ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Entamoeba.histo ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
nTrypanosom.bruce ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Giardia.intes ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
2001
Mycobacter.lepra ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Streptomyc.grise ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Bacillus.subti ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Lactobacil.delbr ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Leuconosto.mesen ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Staphyloco.aureu ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Bartonella.bacil ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Rhodopseud.palus ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Rickettsia.ricke ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Bordetella.bronc ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Escherichi.coli ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Haemophilu.influ ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Thermus.therm ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Thermotoga.marit ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Zea.mays.CP ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
nChlamydomo.reinh.CP ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Euglena.graci.CP ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Desulfuroc.mobil ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Sulfolobus.acido ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Thermofilu.pende ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Thermoprot.tenax ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Halobacter.halob ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Halobacter.maris ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Halococcus.morrh ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Natronobac.magad ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Methanococ.vanni ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Methanococ.janna ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Xenopus.laevi ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Homo.sapie -CCGCGAGGG GGGTCTCCCC CGGCGC--GG CGCCGGCGTC TCCTCG-TGG GGGGGCCGGG CCACCCCTCC CACGGCGCGA CCGCTCTCCC ACCCCTCCTC
Candida.albic ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Saccharomy.cerev ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Schizosacc.pombe ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Oryza.sativ ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Arabidopsi.thali ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Fragaria.anana ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Chlorella.ellip ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
nEuglena.graci ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Entamoeba.histo ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
nTrypanosom.bruce ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Giardia.intes ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
2101
Mycobacter.lepra ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Streptomyc.grise ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Bacillus.subti ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Lactobacil.delbr ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Leuconosto.mesen ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Staphyloco.aureu ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Bartonella.bacil ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Rhodopseud.palus ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Rickettsia.ricke ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Bordetella.bronc ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Escherichi.coli ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Haemophilu.influ ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Thermus.therm ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Thermotoga.marit ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Zea.mays.CP ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
nChlamydomo.reinh.CP ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Euglena.graci.CP ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Desulfuroc.mobil ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Sulfolobus.acido ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Thermofilu.pende ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Thermoprot.tenax ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Halobacter.halob ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Halobacter.maris ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Halococcus.morrh ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Natronobac.magad ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Methanococ.vanni ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Methanococ.janna ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Xenopus.laevi ---------- ---------- ---------- ---------- ---------- -----TCCCG CTCCCCCCCG GGGGGGCGGG CCGCGGGGCG GGGAAGGGGG
Homo.sapie CCCGCG---C CCCCGCCCCG GCGACGGGGG GGGTGCCGCG CGCGGGTCGG GGGGCGGGGC GGACTGTCCC CAGTGCGCCC CGGGCGGGTC GCGCCGTCGG
Candida.albic ---------- ---------- --TTCT---- ---------- ---GCTGTGT G-TTATAGCC TCTGAC--GA TACTGCCAGC CTAGACCGAG GACTGC----
Saccharomy.cerev ---------- ---------- --CTCG---- ---------- ----GTAAGT A-TTATAGCC TGTGGG--AA TACTGCCAGC TGGGACTGAG GACTGC----
Schizosacc.pombe ---------- ---------- --TCT----- ---------G CCTGGGGAGT GTTTATAGCC CTTGTTGTAA TACGTCCACT GGGGACTGAG GACTGC----
Oryza.sativ ---------- ---------- --TCCGC--- ---------- ---------- --------GC CCCCG-GCAG CCGTCGTCGG ACGCAGCCGG T---------
Arabidopsi.thali ---------- ---------- --TTGAT--- ---------- ---------- --------AC GCTTGTGGAG ACGTCGCTGC CGTGATCGTG GTCTG-----
Fragaria.anana ---------- ---------- --TCGAC--- ---------- ---------- --------AT GC-CGTGGAG ACGTCGTCGA CGCGATCATG GCTGG-----
Chlorella.ellip ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----CAATG- ----------
nEuglena.graci ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------A
Entamoeba.histo ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
nTrypanosom.bruce ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Giardia.intes ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
2201
Mycobacter.lepra ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Streptomyc.grise ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Bacillus.subti ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Lactobacil.delbr ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Leuconosto.mesen ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Staphyloco.aureu ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Bartonella.bacil ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Rhodopseud.palus ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Rickettsia.ricke ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Bordetella.bronc ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Escherichi.coli ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Haemophilu.influ ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Thermus.therm ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Thermotoga.marit ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Zea.mays.CP ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
nChlamydomo.reinh.CP ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Euglena.graci.CP ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Desulfuroc.mobil ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Sulfolobus.acido ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Thermofilu.pende ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Thermoprot.tenax ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Halobacter.halob ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Halobacter.maris ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Halococcus.morrh ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Natronobac.magad ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Methanococ.vanni ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Methanococ.janna ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Xenopus.laevi AA-------- ---------- --------GG GGCCCCCCGC TCCCGGCGCG GCTGTCAACC GGGGCGGACT GCCCCCAGTG CGCCCCGTCC GCGCCGCGCC
Homo.sapie GC-------- ---------- ---------- ---------- ---------- ---------- ---CCGGGGG AGGTTCTCTC GGGGCCACGC GCGCGTCCCC
Candida.albic ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- GGT------- --------TT
Saccharomy.cerev ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- GAC------- --------GT
Schizosacc.pombe ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- GGC------- --------TT
Oryza.sativ ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---CACCGCG CGCCTCTGGC CGGCCC--CT
Arabidopsi.thali ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---CAGCACG CGCCT-AACG GCGTGC--CT
Fragaria.anana ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---CAGCGCG CGCCT-TCGG GCCTGC--CT
Chlorella.ellip ---------- ---------- ---------- ---------- ---------- ---------- ---------- -CGAGCTCGC GGATCGAGGC CTCAAGCGTG
nEuglena.graci TT-------- ---------- --CGGGGTGT GCTTGGCTGC ACCGGGGGCT GCACCGTTCT GACGGTGGTC CCCTTGCTGG CTGCACCGTC CCCCAGCCTG
Entamoeba.histo ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----CCGATA ATAATGGAAT GATAAAAGCT
nTrypanosom.bruce ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- --------TC
Giardia.intes ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
2301
Mycobacter.lepra ---------- -TTTGT---- ---------- ---------- ---------- --GGGGTGAT GGC------G TGCTTTTTGA AGAATGAGCC TGCGAGTCAG
Streptomyc.grise ---------- -CTTG----- ---------- ---------- ----TGCTGT CAGTCGTGAC TGC------G TGCCTTTTGA AGAATGAGCC TGCGAGTTAG
Bacillus.subti ---------- -TTAA----- ---------- ---------- ---------- --CGGGTGAT GGC------G TGCCTTTTGT AGAATGAACC GGCGAGTTAC
Lactobacil.delbr ---------- -TTAA----- ---------- ---------- ---------- --CGGGTAAT GGC------G TGCCTTTTGT AGAATGAACC GGCGAGTTGC
Leuconosto.mesen ---------- -TTAA----- ---------- ---------- ---------- --TGGGTGAT GGC------G TGCCTTTTGT AGAATGAACC GGCGAGTTAC
Staphyloco.aureu ---------- -TTAA----- ---------- ---------- ---------- --TGGGTGAT GGC------G TGCCTTTTGT AGAATGAACC GGCGAGTTAC
Bartonella.bacil ---------- -TGTTC---- ---------- ---------- ---------- --TGGGTGAC GGC------G TACCTTTTGT ATAATGGGTC AGCGACTTAG
Rhodopseud.palus ---------- -CGTTC---- ---------- ---------- ---------- --TGGGTGAC GTC------G TACCTTTTGT ATTATGGGCC AGCGACTTAA
Rickettsia.ricke ---------- --TTAT---- ---------- ---------- --------AT GTCTTGTGAC GGC------G TACCTTTTGT ATAATGGGTC AGCGACTTAG
Bordetella.bronc ---------- -TTTAT---- ---------- ---------- ---------- --GGGGTGAC GGC------G TACCTTTTGT ATAATGGGTC AGCGACTTAC
Escherichi.coli ---------- -TTAG----- ---------- ---------- ---------- -GCGTGTGAC TGC------G TACCTTTTGT ATAATGGGTC AGCGACTTAT
Haemophilu.influ ---------- -GCAA----- ---------- ---------- ---------- -CCTTGTGAC TGC------G TACCTTTTGT ATAATGGGTC AGCGACTTAT
Thermus.therm ---------- -GCAA----- ---------- ---------- ---------- --GGGGTTGT GGC------G TGCCTATTGA AGCATGAGCC GGCGACTCAC
Thermotoga.marit ---------- -ATTT----- ---------- ---------- ---------- -GGGGGTGAC GGC------G TGCCTTTTGA TTAATGAGCC CGCGAGTTGC
Zea.mays.CP ---------- AAGTGA---- ---------- ---------- ---------- --TCTCTGAC CGC------G TGCCTGTTGA AGAATGAGCC GGCGACTCAT
nChlamydomo.reinh.CP ---------- -AATG----- ---------- ---------- ---------- --CTTGTGAC CGC------G TGCCTGTTGA AGAATGAGCC GGCGACTTAT
Euglena.graci.CP ---------- ATTTAA---- ---------- ---------- ---------- --AGATTGAC TGT------G TGCCTGTTGA AGAATGAGCC GGCGACTTAT
Desulfuroc.mobil ---------- -GTGA----- -----CCCGG GAGTACGAGG CGGGCTGA-C -CAGGGTCGT GCC------G TCCGTCTTGA AACACGGGCC GGGGAGTCCA
Sulfolobus.acido ---------- -GCAA----- -----GCCCT TAGTACGAGG AAGGGCGA-T -CGGGGTCAC GCC------T TTCGTCTTGA AACACGGGCC GGGGAGTTCA
Thermofilu.pende ---------- -GCGA----- -----CCGGG GAGTACGAGG GGAGGGGA-C -CGGGGTCGC GCC------T TACGTCTAGA AACACGGGCC GGGGAGTTCA
Thermoprot.tenax ---------- -GTGA----- -----CGGGG GAGTACGAGG GCGAGGGT-C -CAGGGTCCG CCC------T TACGTCTAGA AACACGGGCC GGGGAGTTCA
Halobacter.halob ---------- -GCAA----- -----ACTCA TGGTAGGACC TGAGAGGAGC -CGATGTTCC GTC------G TACGTTTTGA AAAACGAGCT AGGGAGTGTG
Halobacter.maris ---------- -GCGA----- -----GTCTC CAGTAAGACT CACGGGAAGC -CGATGTTCT GTC------G TACGTTTTGA AAAACGAGCC AGGGAGTGTG
Halococcus.morrh ---------- -GCGA----- -----CCCCG CAGTAGCAAC CGAGACGAGC -CGATGTTCC GTC------G TGCGTTTTGA AAAACGAGCC AGGGAGTGTG
Natronobac.magad ---------- -GCGA----- -----GTCTC TAGTAGGAAT CGACGGAAGC -CGATGTTCT GTC------G TACGTTTTGA AAAACGAACC AGGGAGTGTG
Methanococ.vanni ---------- -GCAA----- -----GGCGG CTGTACGAAG AACAGA--GC -CAGGGTTGC GTC------C TCCGTTTCGA AAAACGGGCC GGGGAGTGTA
Methanococ.janna ---------- -GCGA----- -----GGGAG GAGTACGAGG GGTGGCATGC -CGGGGTCGT GCC------G TCCGTTTCGA AAAACGGGCC GGGGAGTGTA
Xenopus.laevi GCCGAGGCGG GAGGGCCCGC GGGAGCCGCC AGGGGTCCGC GGCGATGTCG GT-GTCCCAC CCG------A CCCGTCTTGA AACACGGACC AAGGAGTCTA
Homo.sapie -CGAAGAGGG GGACGGCGGA GC-GAGCGCA CGGGGTCGGC GGCGACGTCG GC-TACCCAC CCG------A CCCGTCTTGA AACACGGACC AAGGAGTCTA
Candida.albic TTTT------ ---------- ------ACCT ---AGGATGT TGGCATAATG AT---CTTAA GTC------G CCCGTCTTGA AACACGGACC AAGGAGTCTA
Saccharomy.cerev AA-------- ---------- ------GTCA ---AGGATGC TGGCATAATG GT---TATAT GCC------G CCCGTCTTGA AACACGGACC AAGGAGTCTA
Schizosacc.pombe CGT------- ---------- ------GCCA ---AGGATGC TGACATAATG GT---TTTCA ATG------G CCCGTCTTGA AACACGGACC AAGGAGTCTA
Oryza.sativ CG-------- --------GG GCGT-CGCGC C----GCAAC GGCCTGCGGG CT--CCCCAT CCG------A CCCGTCTTGA AACACGGACC AAGGAGTCTG
Arabidopsi.thali CG-------- --------GC ATCAGCGTGC TCCGGGCGTC GGCCTGTGGG CT--CCCCAT TCG------A CCCGTCTTGA AACACGGACC AAGGAGTCTG
Fragaria.anana CG-------- -------CG- ACCTGCGTGC TCCTGGTAAC GGCT-GCGGG CT--CCCCAT TCG------G CCCGTCTTGA AACACGGACC AAGGAGTCTG
Chlorella.ellip CCC--TTTGG GTCCTTCGGG AACTGCGCGC TCA-GGATGC TGGCGGAAGG CT---TCCAA TCT------A CCCGTCTTGA AACACGGACC AAGGAGTCTA
nEuglena.graci ACCCCA---G TGAGAAATTG GCAGCAGAGC TTGGCACCCC TCCTTGCAGT GC--TGCTCT CTG------- CCCGTCTCGA AACACGGACC AAGGAGTCTA
Entamoeba.histo ATTTAAGGTA AGATTAATAA ATTTAATCCC GAGAATAGAA ACTCTTGAAG AAGTAAATTA TCT------A CCCGTCTTGA AACACGGACC AAGGAGTCTA
nTrypanosom.bruce ACTCTCTTCC TCCTTCCCTG TTCGTGCGTC TCGACGCTGG CGATGGAAAT G--GGGTGCC CCC------A CCCGTCTTGA AACACGGACC AAGGAGTCAA
Giardia.intes ---------- ---------- ---------- ---------- ---------- ------CCGC CGG------C CCCGTCTCGA AACACGGACC GAGGAGCCAC
********************************
2401
Mycobacter.lepra GGACATGTCG CGA--GGTTA ACCC------ -GTGT----- ---------- -GGGGTAGCC GC-AGC-GAA A-GCGA---- ---------- ----------
Streptomyc.grise CGGTGTGTAG CGA--GGTTA ACCC------ -GTGT----- ---------- -GGGGAAGCC GT-AGC-GAA A-GCGA---- ---------- ----------
Bacillus.subti -GATCCCGTG CAA--GGTTA AGCA------ -GAAGA---- ---------- -TGCGGAGCC GC-AGC-GAA A-GCGA---- ---------- ----------
Lactobacil.delbr -GTTAGTCAG CAA--GGTTA AGTCA----- -GAAAA---- ---------- -GACGGAGCC GT-AGC-GAA A-GCGA---- ---------- ----------
Leuconosto.mesen -GGTATCGTG CGA--GGTTA AGGTG----- -GAAAG---- ---------- -ACCGGAGCC GC-AGC-GAA A-GCGA---- ---------- ----------
Staphyloco.aureu -GATTTGATG CAA--GGTTA AGCA------ -GTAAA---- ---------- -TGTGGAGCC GT-AGC-GAA A-GCGA---- ---------- ----------
Bartonella.bacil -TCTAACGAG CAA--GCTTA AGCC------ -GA-TA---- ---------- -GGTGTAGGC GT-AGC-GAA A-GCGA---- ---------- ----------
Rhodopseud.palus -TTTAACGAG CAA--GCTTA AGCC------ -GG-TA---- ---------- -GGTGTAGGC GC-AGC-GAA A-GCGA---- ---------- ----------
Rickettsia.ricke -TTTATCTAG CAA--GCTTA AGCC------ -GT-TA---- ---------- -GGTGTAGGC GT-AGC-GAA A-GCGA---- ---------- ----------
Bordetella.bronc -ATTCAGTGG C-A--GCTTA ACC------- -GAATA---- ---------- --GGGAAGGC GT-CAG-AAN A-GCA----- ---------- ----------
Escherichi.coli -ATTCTGTAG CAA--GGTTA ACC------- -GAATA---- ---------- --GGGGAGCC GA-AGG-GAA A-CCGA---- ---------- ----------
Haemophilu.influ -ATTTTGTAG CGA--GGTTA ACC------- -GAATA---- ---------- --GGGGAGCC GA-AGG-GAA A-CCGA---- ---------- ----------
Thermus.therm -GGTCGTGGG CGA--GCTTA AGCC------ -GTTGA---- ---------- -GGCGGAGGC GT-AGG-GAA A-CCGA---- ---------- ----------
Thermotoga.marit -CGTCGGTGG CGA--GGTTA AGCC------ -GACGAA--- ---------- -GGCGTAGCC GT-AGC-GAA A-GCGA---- ---------- ----------
Zea.mays.CP -AGGCAGTGG CTT--GGTTA AGGGAATG-- -GAACCC--- ---------- -ACCGGAGCC GT-AGC-GAA A-GCGA---- ---------- ----------
nChlamydomo.reinh.CP -AGGGAGTGG CTG--GGTTA AGGA------ -GTAAAA--- ---------- -TCCGGAGCC CA-AGC-GAA A-GCGA---- ---------- ----------
Euglena.graci.CP -AGGTGATGG CAA--GGTTA AGG------- -TTTTT---- ---------- --CCGGAGCC AT-AGCTGAA A-TCGA---- ---------- ----------
Desulfuroc.mobil -CGGCAGTGG CGA--GCCTA AGGGGG---- -TCAAA---- ---------G CCCCGGAGGC GT-AGG-GAA A-CCGA---- ---------- --CAG-----
Sulfolobus.acido -CATCAGTGG CGA--GCTTA AGGAGA---- -TTA------ ---------T CTCCGAAGGC AT-AGG-GAA A-CCAA---- ---------- --GT------
Thermofilu.pende -CGGCTGTGG CGA--GCCTA AGGGGT---- -TCAA----- ---------G CCCCGAAGGC GT-AGG-GAA A-CCGA---- ---------- --CAA-----
Thermoprot.tenax -CGGCCGTGG CGA--GTCTA AGGGGT---- -TTA------ ---------A CCCCGTAGGC GC-AGG-GAA A-CCGA---- ---------- --CA------
Halobacter.halob -CCTGTTTGA CGA--GTCTA ACCGGA---- -GTA------ ---------T CCGGGAAGGC GT-AGG-GAA A-CCAA---- ---------- --TAT-----
Halobacter.maris -TCTGTATGG CAA--GTCTA ACCGGA---- -GTA------ ---------T CCGGG-AGGC AC-AGG-GAA A-CCGA---- ---------- --CAT-----
Halococcus.morrh -TCTGCTTGA CGA--GTCTA ACCGA----- -GCA------ ---------T CGGGGAAGGC AT-AGG-GAA A-CCGA---- ---------- --CAT-----
Natronobac.magad -CCTGATTGA CGA--GTCTA ACTCGA---- -GAA------ ---------T CGAGGAAGGC GT-AGG-GAA A-CCGA---- ---------- --CAT-----
Methanococ.vanni -TTGTTGTGG CGA--GCTTA AGATC----- -TTCAC---- ---------- GATCGAAGGC GT-AGG-GAA A-CCAA---- ---------- --CAA-----
Methanococ.janna -CGGGTGTGG CGA--GCCTA AGGGG----- -TTCAA---- ---------- CCCCGGAGGC GT-AGG-GAA A-CCGA---- ---------- --CAT-----
Xenopus.laevi -ACGCGCGCG CGA--GTCGG AGGGACTCTG CGCGAAA--- ---------- CCCT-GTGGC GC-AAT-GAA G-GTGAG-GG CCGGG----- --GCGC---C
Homo.sapie -ACACGTGCG CGA--GTCGG GGGCT---CG CACGAAAGC- ---------C GCC--GTGGC GC-AAT-GAA G-GTGAA-GG CCGGC----- --GCGCTC-G
Candida.albic -ACGTCTATG CGA--GTGTT TGGGT----- -GTAAAA--- ---------- CCCG-TACGC GT-AAT-GAA A-GTGAA--- ---------- --CGA-----
Saccharomy.cerev -ACGTCTATG CGA--GTGTT TGGGT----- -GTAAAA--- ---------- CCCA-TACGC GT-AAT-GAA A-GTGAA--- ---------- --CGT-----
Schizosacc.pombe -GCATCTATG CGA--GTGTT TGGGT----G ATGAAAA--- ---------- CCCA-TCCGC GA-AAT-GAA A-GTGAA--- ---------- --TGC-----
Oryza.sativ -ACATGCGTG CGA--GTCGA CGGGT----- TCTGAAA--- ---------- CCTGGGATGC GC-AAG-GAA G-CTGAC--- ---------- ----------
Arabidopsi.thali -ACATGTGTG CGA--GTCAA CGGGT----- GAGTAAA--- ---------- CCCGTAAGGC GC-AAG-GAA G-CTGAT--- ---------- ----------
Fragaria.anana -ACATGTGTG CGA--GTCAA CGGGT----- GATTAAA--- ---------- CCCGTAAGGC GC-AAG-GAA G-CTAAT--- ---------- ----------
Chlorella.ellip -ACATGTATG CGA--GTTGG TGGGT----- GA-TAAA--- ---------- CCCATGAAGC GC-AAG-TAA C-CTGAC--- ---------- ----------
nEuglena.graci -AGGAGCTTG CCA--GTCGG ATGGCTGAT- CCAAAACCT- ---------- CTTCTGAGGC GT-GGT-GAA G-GCAAC--- ---------- --TATC----
Entamoeba.histo -ACATGGATG CGA--ATGAG AATAG----- CAGGAA---- ---------- ---AG-CTAT AA-CAT-GAA --GAGAA--- ---------- --AACKAA--
nTrypanosom.bruce -ACAGACGCG CAA--GGGA- GGAG-TATGT ATGTGAGAA- ---------- CTCTTTTCTC GT-ACT-GAA A-GGGA--GG TGTG------ --ATTT----
Giardia.intes -GCGCCGCGG CGA--GCCCG AGGG------ -AGCC----- ---------- CCC--GCGGC GG-AGC-GAG C-GCGAG--- ---------- ----------
****** *********************
2501
Mycobacter.lepra ---------G TCTGAA---- ---------- ---------- ---------- ---------- ---------- -----TAGGG CGTATCACGT ----------
Streptomyc.grise ---------G TCCGAA---- ---------- ---------- ---------- ---------- ---------- -----CAGGG CG-------- ----------
Bacillus.subti ---------G TCTGAA---- ---------- ---------- ---------- ---------- ---------- -----TAGGG CG-------- ----------
Lactobacil.delbr ---------G TCTGAA---- ---------- ---------- ---------- ---------- ---------- -----TAGGG CG-------- ----------
Leuconosto.mesen ---------G TGTGAA---- ---------- ---------- ---------- ---------- ---------- -----TAGCG CG-------- ----------
Staphyloco.aureu ---------G TCTGAA---- ---------- ---------- ---------- ---------- ---------- -----TAGGG CG-------- ----------
Bartonella.bacil ---------G TCTGAA---- ---------- ---------- ---------- ---------- ---------- -----TAGGG CG-------- ----------
Rhodopseud.palus ---------G TCTGAA---- ---------- ---------- ---------- ---------- ---------- -----TAGGG CG-------- ----------
Rickettsia.ricke ---------G TCTGNA---- ---------- ---------- ---------- ---------- ---------- -----TAGGG CG-------- ----------
Bordetella.bronc ---------G TCCGAA---- ---------- ---------- ---------- ---------- ---------- -----TAGGG CG-------- ----------
Escherichi.coli ---------G TCTTAA---- ---------- ---------- ---------- ---------- ---------- -----CTGGG CG-------- ----------
Haemophilu.influ ---------G TCTTAA---- ---------- ---------- ---------- ---------- ---------- -----CTGGG CG-------- ----------
Thermus.therm ---------G TCCGAA---- ---------- ---------- ---------- ---------- ---------- -----CAGGG CGCAAGCGGG CCG-------
Thermotoga.marit ---------G TCCGAA---- ---------- ---------- ---------- ---------- ---------- -----CAGGG CG-------- ----------
Zea.mays.CP ---------G TCTTCA---- ---------- ---------- ---------- ---------- ---------- -----TAGGG CG-------- ----------
nChlamydomo.reinh.CP ---------G TCTGAA---- ---------- ---------- ---------- ---------- ---------- -----TAGGG CG-------- ----------
Euglena.graci.CP ---------G CTTAAA---- ---------- ---------- ---------- ---------- ---------- -----TAAAG CGAAAAACTT TC--------
Desulfuroc.mobil ---------G CCCGCAACCG CC-------- ---------- -GCAA----- ---------- --------GG CGGCGAGGGG CG---GGGTC C---------
Sulfolobus.acido ---------G CCCGCA-GCC TAG------- ---------- -TTT------ ---------- --------CT AGGCGAGGGG CA---GGGTC T---------
Thermofilu.pende ---------G CCCGTA-GCC AGCC------ ---------- -GCAT----- ---------- -------GGC TGGTGTGGGG CG---GGGTC T---------
Thermoprot.tenax ---------G CCCGTA-GCC GGT------- ---------- -TTGC----- ---------- --------GC CGGTGAGGGG CG---GGGTC C---------
Halobacter.halob ---------G GCCGCG-GC- ---------- ---------- -ATT------ ---------- ---------- --GCGAGGGC CA---CCGTG T---------
Halobacter.maris ---------G GCCGCA-GGG C--------- ---------- -TTT------ ---------- ---------- GCCCGAGGGC CG---CCGTC T---------
Halococcus.morrh ---------G GCCGCA-GTG CGT------- ---------- -TCT------ ---------- --------AC GTACCAGGGC CG---CCGTG T---------
Natronobac.magad ---------G GCCGCA-GTC ---------- ---------- -TTAC----- ---------- ---------- -GACGAGGGC CG---CCGTG T---------
Methanococ.vanni ---------G TCCGCA-GA- ---------- ---------- -ATC------ ---------- ---------- --TTTAGGGA CG---GGGTC T---------
Methanococ.janna ---------G CCCGCA-ACC ---------- ---------- -CTTA----- ---------- ---------T GGGTGAGGGG CG---GGGTC T---------
Xenopus.laevi CCGGCT-GAG GTGGGATCCC GCCGCCCCTC CCTCCGC-CC CCCCGGGGGC --GGGGGGGG G-CGCCGGCG GGCGCACCAC CG---GCCCG TCTCG-----
Homo.sapie CCGGCC-GAG GTGGGATCCC GAGGCCT--- ---------- -CTCC----- ---------A GTCCGCCGAG GG-GCACCAC CG---GCCCG TCTCG-----
Candida.albic --------AG GTGGGGGCCC ---------- ---------- -ATTA----- ---------- ---------G GGTGCACCAT CG---ACCGA TCCTGAT---
Saccharomy.cerev --------AG GTTGGGGCCT ---------- ---------- CGCAAG---- ---------- ---------A GGTGCACAAT CG---ACCGA TCCTGAT---
Schizosacc.pombe --------AG GTGGGAACGC ---------- ---------C CTTGTG---- ---------- ---------G CGTGCACCAT CG---ACCGA CCCGGAA---
Oryza.sativ --------GA GCGGGA-GGC ---------- ---------- CCTCAC---- ---------- ---------G CC-GCACCGC TG---GCCGA CCCTGA----
Arabidopsi.thali --------TG GCGGGATCCT ---------- ---------- -CGC------ ---------- ---------G GGTGCACCGC CG---ACCGA CCTTGA----
Fragaria.anana --------GC GCGGGATCCC ---------- ---------- TTTAC----- ---------- ---------G GGTGCACCGC CG---ACCGA CCTTGA----
Chlorella.ellip --------TG GTGGGAGGGC C--------- ---------- -TGT------ ---------- ---------G CCTGCACCAT CG---ACCGA CCATGA----
nEuglena.graci --------CT TCCAGATGGG G--------- ---------- -CTAG----- ---------- --------TC TCTGCATGGA ACG--ACCGG ACCCGAA---
Entamoeba.histo -------AAA CTATGAGAGT --GTA----- ---------- -GAAA----- ---------- ----TACAT- TTAGCAATAG TA---TCT-- ----------
nTrypanosom.bruce TACACCCGTG GCGTGCGCAA TTT------- ---------C TCTTTTTT-- ---------- -------GTG TTT--TTGCC CAAC-GCCGG CCG-------
Giardia.intes ---------- ---------- ---------- ---------- ---------- ---------- ---------- --ACGCCCCG GG---CCCGC CGC-------
2601
Mycobacter.lepra ---------- -------GTG A--------- ---------- ---------- -GCGTGTGTA GTGGCG-TGT TCTGGACCC- GAAGCGG-AG TG---ATCTA
Streptomyc.grise ---------- ---------- ---------- ---------- ---------- -----GTTGA GTTGCA-CGC TCTAGACCC- GAAGCGG-AG TG---ATCTA
Bacillus.subti ---------- ---------- ---------- ---------- ---------- -----CATGA GTACGT-GGT CGTAGACCC- GAAACCA-GG TG---ATCTA
Lactobacil.delbr ---------- ---------- ---------- ---------- ---------- ------AGCA GTTGCG-TGA CGCAGACCC- GAAACCA-AG TG---ACCTA
Leuconosto.mesen ---------- ---------- ---------- ---------- ---------- -----AAT-A GTACGA-TGC TGTAGACCC- GAAACCA-AG TG---ACCTA
Staphyloco.aureu ---------- ---------- ---------- ---------- ---------- ------TTTA GTATTT-GGT CGTAGACCC- GAAACCA-GG TG---ATCTA
Bartonella.bacil ---------- ---------- ---------- ---------- ---------- ------TTCA GTTCGT-TGG ATTAGACCC- GAAACCG-AG TG---ATCTA
Rhodopseud.palus ---------- ---------- ---------- ---------- ---------- ------TCAA GTTCGT-TGG ATTAGACCC- GAAACCT-AG TG---ATCTA
Rickettsia.ricke ---------- ---------- ---------- ---------- ---------- ------TTTA GTTAGA-TGA ATTAGACCC- GAAACCG-GG TG---ATCTA
Bordetella.bronc ---------- ---------- ---------- ---------- ---------- -----TTCCA GTCGCT-GGG TGTAGACCC- GAAACCA-GA TG---ATCTA
Escherichi.coli ---------- ---------- ---------- ---------- ---------- ------TTAA GTTGCA-GGG TATAGACCC- GAAACCC-GG TG---ATCTA
Haemophilu.influ ---------- ---------- ---------- ---------- ---------- ------AATA GTTGCA-AGG TATAGACCC- GAAACCC-GG TG---ATCTA
Thermus.therm ---------- -------CAC G--------- ---------- --------CG GCCCGC-AAA GTCCGC-GGC CGTGGACCC- GAAACCG-GG CG---AGCTA
Thermotoga.marit ---------- ---------- ---------- ---------- ---------- -----C-TCA GTCACC-GGC GGCAGACCC- GAAGCCG-GG TG---AGCTA
Zea.mays.CP ---------- ---------- ---------- ---------- ---------- -------ATT GTCACT-GCT TATGGACCC- GAACCTG-GG TG---ATCTA
nChlamydomo.reinh.CP ---------- ---------- ---------- ---------- ---------- ----CAAATG GTCACT-TCT TATGGACCC- GAACCCG-GG TG---ATCTA
Euglena.graci.CP ---------- ------TTCT T--------- ---------- ---------G AAAGTT-TAT GTCATT-GCT TATAGACCC- GAACCCA-GG TG---ATCTA
Desulfuroc.mobil ---------- -------CAA A--------- ---------- ---------- GGGCCC-GGA GTCACT-GCC GTGGGACCA- GAAACCG-GG CG---ATCTA
Sulfolobus.acido ---------- -------GTC A--------- ---------- ---------- GGGCCT-GAA GCCACT-GAT GTGAGGCTA- GAAACCG-GG CG---ATCTA
Thermofilu.pende ---------- -------GAA A--------- ---------- ---------- GGGCCC-GTA GTCACA-GCC GTGAGACCA- GAAACCG-AG CG---ATCTA
Thermoprot.tenax ---------- -------GAA A--------- ---------- ---------- GGGCCT-GTA GCCACG-GCC GTGAGACCA- GAAACCG-GG CG---ATCTA
Halobacter.halob ---------- -------TCA A--------- ---------- ---------- GCGCGG-GGA GTCAAA-CGG GCACGACCC- GAAACCC-GG TG---ATCTA
Halobacter.maris ---------- -------TCA A--------- ---------- ---------- GGGCGG-GGA GCCATG-TGG ACACGACCC- GAATCCG-GA CG---ATCTA
Halococcus.morrh ---------- -------TCA A--------- ---------- ---------- GCGCGG-GGA GTCGAG-CGG ACACGACCC- GAATCCG-GA CG---ATCTA
Natronobac.magad ---------- -------TCA A--------- ---------- ---------- GCGCGG-GGA GTCAAT-CGG GCACGACCC- GAAACTG-GA TG---ATCTA
Methanococ.vanni ---------- -------TAA ---------- ---------- ---------- GGGCCC-GGA GTCACA-GCA ATACGACCC- GAAACCG-GG CG---ATCTA
Methanococ.janna ---------- -------TAA T--------- ---------- ---------- GGGCCC-GGA GTCACA-CCC GTACGACCC- GAAACCG-GG CG---ATCTA
Xenopus.laevi ---------- -CCCGCCCCG TCGGG----- ---------- ------GAGG TGGAGCGTGA GCGCGC-GCG ATAGGACCC- GAAAGAT-GG TG---AACTA
Homo.sapie ---------- -CCCGCCGCG CCGGG----- ---------- ------GAGG TGGAGCACGA GCGCAC-GTG TTAGGACCC- GAAAGAT-GG TG---AACTA
Candida.albic ---------- --GTG--TTC GGAT------ ---------- ------GGAT TTGAGTAAGA GCATAG-CTG TTGGGACCC- GAAAGAT-GG TG---AACTA
Saccharomy.cerev ---------- --GTC--TTC GGAT------ ---------- ------GGAT TTGAGTAAGA GCATAG-CTG TTGGGACCC- GAAAGAT-GG TG---AACTA
Schizosacc.pombe ---------- --GTT--TGT CAAT------ ---------- --GGAAGGGT TTGAGTAAGA GCATAG-CTG TTGGGACCC- GAAAGAT-GG TG---AACTA
Oryza.sativ ---------- ---TC--TTC TGT------- ---------- ---GAAGGGT TCGAGTTGGA GCACGC-CTG TCGGGACCC- GAAAGAT-GG TG---AACTA
Arabidopsi.thali ---------- ---TC--TTC TGA------- ---------- ---GAAGGGT TCGAGTGTGA GCATGC-CTG TCGGGACCC- GAAAGAT-GG TG---AACTA
Fragaria.anana ---------- ---TC--TTC TGA------- ---------- ---GAAGGGT TCGAGTGTGA GCATGC-CTG TCGGGACCC- GAAAGAT-GG TG---AACTA
Chlorella.ellip ---------- ---TC--TTC TGT------- ---------- ---GAAAGGT TTGAGTACGA GCATAC-CTG TTGGGACCC- GAAAGAT-GG TG---AACTA
nEuglena.graci ---------- -GTCC---AG TGGAC----- ---------- ----AGGGTT TCGAGTGCTT GCAAGG-TCC TTGGGACCC- GAAAGGT-GG TG---AACTA
Entamoeba.histo ---------- -----TTCAA T--------- ---------- ---------- ---AGAAGAA GTAAAT-ATG TTAGGACCC- GAAAGAT-GG TG---AACTA
nTrypanosom.bruce ---------- ---GC-CCCC CGT------- ---------- -------GGG CTGCGCGCGA GTGTGC-CTG TTTGGACCC- GAAAGGT-GG TG---AACTA
Giardia.intes ---------- -GCCC--CTG CGGGC----- ---------- -------GTG CGCGGGCCGA GCCGCG-GCG CGTGGGCCC- GAAAGGC-GG TG---ATCTA
****************************
2701
Mycobacter.lepra CCCATGGCCA GGGTGAAGCG --CGGGTAAG A-CCGCGTGG AGGCCCGA-- ACCC-ACTTA A-GTTGAAGA TTG-AGGGGA T-GAGTTGTG GGTAG-GGGT
Streptomyc.grise GCCATGGGCA GGTTGAAGCG --GAGGTAAG A-CTTCGTGG AGGACCGA-- ACC--ACCAG G-GTTGAAAA CCT-GGGGGA T-GACCTGTG GTTAG-GGGT
Bacillus.subti CCCATGTCCA GGGTGAAGTT --CAGGTAAC A-CTGAATGG AGGCCCGA-- ACCC-ACGCA C-GTTGAAAA GTG-CGGGGA T-GAGGTGTG GGTAG-GGGT
Lactobacil.delbr CCCATGACCA GGTTGAAGGC --GCGGTAAA A-CGCGCTGG AGGACCGA-- ACCC-ACGTA A-GTTGAAAA TTG-CGGGGA T-GAGTTGTG GGTAG-CGGT
Leuconosto.mesen CCCATGGTCA GGATGAAGGT --GAGGTAAA A-CTTACTGG AGGTCCGA-- ACCG-GTGCA T-GTTAAAAA ATG-CTCGGA T-GAACTGTG GGTAC-GGGT
Staphyloco.aureu CCCTTGGTCA GGTTGAAGTT --CAGGTAAC A-CTGAATGG AGGACCGA-- ACCG-ACTTA C-GTTGAAAA GTG-AGCGGA T-GAACTGAG GGTAG-CGGA
Bartonella.bacil GCCATGAGCA GGCTGAAGGT --AAGGTAAC A-CTTACTGG AGGGCCGA-- ACCC-GTATC T-GTTGCAAT AGA-TTGGGA T-GACTTGTG GCTAG-GGGT
Rhodopseud.palus GCCATGAGCA GGTTGAAGGT --GAGGTAAC A-CTCACTGG AGGACCGA-- ACGG-GTGCC T-GTTGAAAA AGG-CTCCGA T-GACTTGTG GTTAG-GGGT
Rickettsia.ricke GCCATGGCCA GGTTGAAAGC --GGAGTAAA A-TCCACTGA AGGACCGA-- ACCC-ACTAC T-GTTGAAAA AGT-AGGGGA T-GAGCTGTG GTTAG-GGGT
Bordetella.bronc CCCATGGCCA GGTTGAAGGC --ACGGTAAC A-CGTGCTGG AGGACCGA-- ACCC-ACTAG T-GTTGAAAA ACT-AGGGGA T-GAGCTGTG GATAG-GGGT
Escherichi.coli GCCATGGGCA GGTTGAAGGT --TGGGTAAC A-CTAACTGG AGGACCGA-- ACCG-ACTAA T-GTTGAAAA ATT-AGCGGA T-GACTTGTG GCTGG-GGGT
Haemophilu.influ GCCATGGGCA GGTTGAAGGT --TGGGTAAC A-CTAACTGG AGGACCGA-- ACCG-ACTAA T-GTTGAAAA ATT-AGCGGA T-GACTTGTG GCTGG-GGGT
Thermus.therm GCCCTGGCCA GGGTGAAGCT --GGGGTGAG A-CCCAGTGG AGGCCCGA-- ACCG-GTGGG G-GATGCAAA CCC-CTCGGA T-GAGCTGGG GCTAG-GAGT
Thermotoga.marit CCCCTGGGCA GGGTGAAGGT --GGGTTAAA A-CCCACTGG AGGCCCGA-- ACCG-GTGGA C-AGTGAAAA GTC-CTCGGA T-GACCTGGG GGTAG-GAGT
Zea.mays.CP TCCATGACCA GGATGAAGCT --TGGATGAA A-CTAAGCAG AGGTCCGA-- ACCG-ACTGA T-GTTGAAGA ATC-AGCGGA T-GAGTTGTG GTTAG-GGGT
nChlamydomo.reinh.CP TTCATGGCCA GGATGAAGCT --TGGGTAAC A-CCAAGTGG AGGTCCGA-- ACCG-ACCGA T-GTTGAAAA ATC-GGCGGA T-GAGCTGTG AATAG-GGGA
Euglena.graci.CP ATCATGGTCA GGTTGAAGTT --TTGGTAAA A-CAGAATGG AGGACTGA-- ACCC-ACCAA T-GTTGAAAA ATT-GGGGGA T-GAACTGTG ATTAG-GGGA
Desulfuroc.mobil GGCGGGGGCA GGGCGAAGCC --GGGGGAAA C-CCCGGTGG AGGCCCGAA- AGGG-TTCTG A-CGTGCAAT TCG-TTCCCA T-GACCCCCG TCTAG-GGGC
Sulfolobus.acido GTCCGGGGCA GGCTGAAGGT --GGGGGAAA C-CCCACTGG AGGGCCGAAT AGGGGTTCTG A-CGTGCAAT TCG-TTCCCT T-GACCTCGG ACTAG-GGGC
Thermofilu.pende GGCCGGGGCA GGGTGAAGCC --CGGCGAAA G-CCGGGTGG AGGCCCGAA- GGGG-TTCTG A-CGTGCAAT TCG-TTCCCA T-GACCTCGG CCTAG-GGGC
Thermoprot.tenax GCCCTGGGCA GGGCGAAGCG --GGGCGAAA G-CCCCGTGG AGGCCCGAA- AGGG-TTCTG A-TGTGCAAA TCG-TTCCCA T-GACCTGGG GCTAG-GGGC
Halobacter.halob CGCGTGGGCA AGGTGAAGCA --TGGCGAAA G-CCATGTGG AGGCCTGTT- AGGGTTGGTG T-CTTTCAAC ACC-CTCCCG T-GACCTACG TGTAG-GGGT
Halobacter.maris CGCATGGACA AGATGAAGCG --TGCCGAAA G-GCACGTGG AAGTCTGTT- AGAGTTGGTG T-CCTACAAT ACC-CTCTCG T-GATCTATG TGTAG-GGGT
Halococcus.morrh CACGATGGCA AGGTGAAGCG --TGGCGAAA G-CTGCGTGG AGGCCTGTT- AGGGATGGTG T-CCTACAAT ACC-CTCCCG T-GACCAGTG TGTAG-GGGT
Natronobac.magad GACGTGGGCA AGGTGAAGCG --TGCCGAAA G-GCACGTGG AGGCCTGTT- AGTGTTGGTG T-CCTACAAT ACC-CTCACG T-GACCTACG TCTAG-GGGT
Methanococ.vanni GGCCGGGGCA AGGTGAAGTC --CCTCAACT G-AGGGATGG AGGCCTGC-- AGAGTTGTTG C-CGTTCGAA GCA-CTCTTC T-GACCTCGG TCTAG-GGGT
Methanococ.janna GGCCGGGGTA GGGTGAAGCC --CCTCGCCA G-AGGGGTGG AGGCCCGC-- AGGGGTGTTA C-CGCGCAAA GTG-CTCCTC T-GACCCCGG TCTAG-GGGT
Xenopus.laevi TGCCTGGGCA GGGCGAAGCC --AGAGGAAA C-TCTGGTGG AGGTCCGT-- AGCGGTCCTG A-CGTGCAAA TCG-GTCGTC C-GACCTGGG TATAG-GGGC
Homo.sapie TGCCTGGGCA GGGCGAAGCC --AGAGGAAA C-TCTGGTGG AGGTCCGT-- AGCGGTCCTG A-CGTGCAAA TCG-GTCGTC C-GACCTGGG TATAG-GGGC
Candida.albic TGCCTGAATA GGGTGAAGCC --AGAGGAAA C-TCTGGTGG AGGCTCGT-- AGCGGTTCTG A-CGTGCAAA TCG-ATCGTC G-AATTTGGG TATAG-GGGC
Saccharomy.cerev TGCCTGAATA GGGTGAAGCC --AGAGGAAA C-TCTGGTGG AGGCTCGT-- AGCGGTTCTG A-CGTGCAAA TCG-ATCGTC G-AATTTGGG TATAG-GGGC
Schizosacc.pombe TGCCTGAATA GGGTGAAGCC --AGAGGAAA C-TCTGGTGG AGGCTCGT-- AGAGATTCTG A-CGTGCAAA TCG-ATCTTC A-AATTTGGG TATAG-GGGC
Oryza.sativ TGCCTGAGCG GGGCGAAGCC --AGAGGAAA C-TCTGGTGG AGGCTCGA-- AGCGATACTG A-CGTGCAAA TCG-TTCGTC T-GACTTGGG TATAG-GGGC
Arabidopsi.thali TGCCTGAGCG GGGTAAAGCC --AGAGGAAA C-TCTGGTGG AAGCCCGC-- AGCGATACTG A-CGTGCAAA TCG-TTCGTC T-GACTTGGG TATAG-GGGC
Fragaria.anana TGCCTGAGCG GGGCGAAGCC --AGAGGAAA C-TCTGGTGG AGGCCCGC-- AGCGATACTG A-CGTGCAAA TCG-TTCGTC T-CACTTGGG TATAG-GGGC
Chlorella.ellip TGCCTGAGCA GGGCGAAGCC --AGAGGAAA C-TCTGGTGG AGGCTCGT-- AGATGTGCTG A-CGTGCAAA TCG-CTTTTC G-GACTTGGG TATAG-GGGC
nEuglena.graci TACCGTTCTA CGGTGAAGCC --ATGGGAAA C-TGTGGTGG AAGCCGGT-- CGCTGTTCTG A-CGTGCAAA TTG-TGTAGC CTGAGTGCGG CATAG-GGGT
Entamoeba.histo TACTTGAACG GATTGAAGCC ---GAAGAAA C-TTTGGTGG AAGATTCA-- CGCAGTGTTA A-CGTGCAAA TTA-CTTGTC A-TATTTGAG TATAG-GGGC
nTrypanosom.bruce TGCCTGAACA AGGTGAAGCC --CGGGGAAA C-CCCGGTGG AGGCCTGT-- AGCGATGCTG A-CGTGCAAA TCG-CTCGTA C-GATTTGGG TATCG-GAGC
Giardia.intes TGCCCGGCGA GGGCGAGGCC --GGGCGAAA G-CCTGGTGG AGGCCCGC-- CGCGGTGCTG A-CGCGCAGA TCG-CTCGTC G-GAGCCGGG CATGG-GGGC
******************************** ******************* *********** *******************
2801
Mycobacter.lepra GAAAGG-CCA A-TCAAACTC CGTGATAGCT GGTTCTCCCC G-AAATGCA- TTT-AGGTGC AGC-GTTGCG TG--GTTC-- ---------- ----------
Streptomyc.grise GAAAGG-CCA A-TCAAACTC CGTGATAGCT GGTTCTCCCC G-AAATGCA- TTT-AGGTGC AGC-GTCGTG TG--TTTC-- ---------- ----------
Bacillus.subti GAAATG-CCA A-TCGAACCT GGAGATAGCT GGTTCTCTCC G-AAATAGC- TTT-AGGGCT AGC-CTCAAG GT--AAGA-- ---------- ----------
Lactobacil.delbr GAAATT-CCA A-ACGAACTT GGAGATAGCT GGTTCTCTCC G-AAATAGC- TTT-AGGGCT AGC-CTCGCA AA--GAGG-- ---------- ----------
Leuconosto.mesen GAAATT-CCA A-ACGAACAT GGAGATAGCT GGTTCTCTCC G-AAATAGC- TTT-AGGGCT AGC-CTCATT AT--AAGC-- ---------- ----------
Staphyloco.aureu GAAATT-CCA A-TCGAACCT GGAGATAGCT GGTTCTCTCC G-AAATAGC- TTT-AGGGCT AGC-CTCAAG TGA-TGAT-- ---------- ----------
Bartonella.bacil GAAAGG-CCA A-TCAAACTC GGAAATAGCT GGTTCTCCGC G-AAATCTA- TTT-AGGTAG AGC-GTTAGT TGA-ATTC-- ---------- ----------
Rhodopseud.palus GAAAGG-CCA A-TCAAACTG GGAAATAGCT GGTTCTCCGC G-AAAGATA- TTT-AGGTAT CGC-CTCGGA CGA-ATAC-- ---------- ----------
Rickettsia.ricke GNAAGG-CCA A-TCAAACTC GGATATAGCT GGTTCTCTGC G-AAATCTA- TTT-AGGTAG AGC-GTTATA GCGATTAC-- ---------- ----------
Bordetella.bronc GAAAGG-CTA A-ACAAATCT GGAAATAGCT GGTTCTCTCC G-AAAACTA- TTT-AGGTAG TGC-CTCAAG TAT--TAC-- ---------- ----------
Escherichi.coli GAAAGG-CCA A-TCAAACCG GGAGATAGCT GGTTCTCCCC G-AAAGCTA- TTT-AGGTAG CGC-CTCGTG AAT-TCAT-- ---------- ----------
Haemophilu.influ GAAAGG-CCA A-TCAAACCG GGAGATAGCT GGTTCTCCCC G-AAATCTA- TTT-AGGTAG AGC-CTTGAG GTG-ACAC-- ---------- ----------
Thermus.therm GAAAAG-CTA A-CCGAGCCC GGAGATAGCT GGTTCTCCCC G-AAATGAC- TTT-AGGGTC AGC-CTCAGG CGC-TGAC-- ---------- ----------
Thermotoga.marit GAAAAG-CTA A-CCGAACCC GGTGATAGCT GGTTCTCCCC G-AAATGCA- TTG-AGGTGC AGC-CTCGGG CGG-TCTG-- ---------- ----------
Zea.mays.CP GAAATG-CCA C-TCGAACCC AGAGCTAGCT GGTTCTCCCC G-AAATGCG- TTG-AGGCGC AGCAGTTGAC TGG---AC-- ---------- ----------
nChlamydomo.reinh.CP GAAATT-CCA A-TCGAACTC GGAGCTAGCT GGATCTCCCC G-AAATGCG- TTG-AGGCGC AGCGGT-AAC GAT-GAAC-- ---------- ----------
Euglena.graci.CP GAAATT-CCA --TCGAACTT GGAGCTAGCT GGATCTCTTC G-AAATGCGG TTGGAGGCGC AGCGTTTAAT TAT-GGTAAA ---------- ----------
Desulfuroc.mobil AAAAGA-CCA A-TCTAGCCC GGTGATAGCT GGTTCCCGCC G-AAGTGGG- TCT-CAGCCC AGC-CCCGCC GG--AGGTG- ---------- ----------
Sulfolobus.acido AAAAGA-CCA A-TCTAGCCC GGTGATAGCT AGTTCCCCCC G-AAATGCG- TCC-TAGCGC AGC-CTCCCT AA--AGGCA- ---------- ----------
Thermofilu.pende AAAAGA-CCA A-TCAAGCTC GGTGATAGCT GGTTCCCCCC G-AAGCGGA- TCC-CAGTCC GGC-CCGCCC TG--AGGTT- ---------- ----------
Thermoprot.tenax AAAAGA-CCA A-CCAAGCCC GGTGATAGCT GGTTCCCCCC G-AAGCGGG- TCC-CAGCCC GGC-CTCCCT GG--AGGTC- ---------- ----------
Halobacter.halob GAAAGG-CCC A-TCGAACCG GGCAACAGCT GGTTCCAACC G-AAACATG- TCG-AAGCAT GAC-CTCTGC CG--AGGTA- ---------- ----------
Halobacter.maris GAAAGG-CCC A-TCGAGTCC GGCAACAGCT GGTTCCAATC G-AAACATG- TCG-AAGCAT GAC-CTCCGC CG--AGGTA- ---------- ----------
Halococcus.morrh GAAAGG-CCC A-TCGAGTCC GGCAACAGCT GGTTCCGACC G-AAACATG- TCG-AAGCAT GAC-CTCCGC CG--AGGTA- ---------- ----------
Natronobac.magad GAAAGG-CCC A-TCGAATCC AGAAACAGCT GGTTCCAACC G-AAAGATG- TCG-AAGCAT CAC-CTCTGC CG--AGATA- ---------- ----------
Methanococ.vanni GAAAGG-CCA A-TCGAGCCC GGAGATAGCT GGTTCCCCTC G-AAGTGAC- TCT-CAGGTC AGC-CAGAGT TC--AGGTA- ---------- ----------
Methanococ.janna GAAAAG-CCA A-TCGAGCCC GGAGATAGCT GGTTCCCCCC G-AAATAAC- TCG-CAGGTT AGC-CGGGGG TT--AGGTA- ---------- ----------
Xenopus.laevi GAAAGA-CTA A-TCGAACCA TCTAGTAGCT GGTTCCCTCC G-AAGTTTC- CCT-CAGGAT AGC-TGGCGC TC--GTC--- ---------- ----------
Homo.sapie GAAAGA-CTA A-TCGAACCA TCTAGTAGCT GGTTCCCTCC G-AAGTTTC- CCT-CAGGAT AGC-TGGCGC TC--TCGCAG ACCCGACGCA ----CCCCCG
Candida.albic GAAAGA-CTA A-TCGAACCA TCTAGTAGCT GGTTCCTGCC G-AAGTTTC- CCT-CAGGAT AGC-AGAAGC TC--GTAT-- ---------- ----------
Saccharomy.cerev GAAAGA-CTA A-TCGAACCA TCTAGTAGCT GGTTCCTGCC G-AAGTTTC- CCT-CAGGAT AGC-AGAAGC TC--GTAT-- ---------- ----------
Schizosacc.pombe GAAAGA-CTA A-TCGAACCA TCTAGTAGCT GGTTCCTGCC G-AAGTTTC- CCT-CAGGAT AGC-AGAAAC TC--AGAT-- ---------- ----------
Oryza.sativ GAAAGA-CTA A-TCGAACCA TCTAGTAGCT GGTTCCCTCC G-AAGTTTC- CCT-CAGGAT AGC-TGGAGC CC--ATTA-- ---------- ----------
Arabidopsi.thali GAAAGA-CTA A-TCGAACCA TCTAGTAGCT GGTTCCCTCC G-AAGTTTC- CCT-CAGGAT AGC-TGGAGC TC--GGAC-- ---------- ----------
Fragaria.anana GAAAGA-CTA A-TCGAACCG TCTAGTAGCT GGTTCCCTCC G-AAGTTTC- CCT-CAGGAT AGCTTGGAGC CC--GTGA-- ---------- ----------
Chlorella.ellip GAAAGA-CTA A-TCGAACCA TCTAGTAGCT GGTTCCCTCC G-AAGTTTC- CCC-CAGGAT AGC-TGGAGC TC--GG---- ---------- ----------
nEuglena.graci GAAAGG-CCA A-TCGAGCCA CCTAGTAGCT GGTTCCCTTC G-AAGTTTC- CCT-CAGGAT AGC-TGGGAT CC--AATGAT GCAAAG---- ---CTTGTAT
Entamoeba.histo GAAAGA-CTC A-TCGAACTA TCTAGTAGCT GGTTCCACCT G-AATATTC- CCT-TAGGAA GGT-CAAAGT AT--TA---- ---------- ----------
nTrypanosom.bruce GAAAGA-CTC A-TCGAACCA CCTAGTAGCT GGTTCACGTC G-AAGTTTC- CCT-CAGGAT AGC-TGGTGC TT--GTCTTT ---------- ----------
Giardia.intes GAAAGA-CTC A-TCGAACCG CCTGGTAGCT GGTTGCCTCC G-AAATGTC- TCC-CAGGAC AGC-CGCCGC CC--CGC--- ---------- ----------
************************************************** *********
2901
Mycobacter.lepra --------AC CAC-GGAGGT AGAGC-TACT GGATGGCCG- ---------- ---------- ---------- ---------- ---------- ----------
Streptomyc.grise --------TT GCC-GGAGGT AGAGC--ACT GGATAGGCG- ---------- ---------- ---------- ---------- ---------- ----------
Bacillus.subti --------GT CTT-GGAGGT AGAGC--ACT GATTGGACT- ---------- ---------- ---------- ---------- ---------- ----------
Lactobacil.delbr --------AT GCT-GGAGGT AGAGC--TCT GTTTGGACT- ---------- ---------- ---------- ---------- ---------- ----------
Leuconosto.mesen --------AT ACT-GGAGGT AGAGC--ACT GTTAAGCCT- ---------- ---------- ---------- ---------- ---------- ----------
Staphyloco.aureu ---------T ATT-GGAGGT AGAGC--ACT GTTTGGACG- ---------- ---------- ---------- ---------- ---------- ----------
Bartonella.bacil ---------T CCA-GGGGGT AGAGC--ACT GGATGGGCT- ---------- ---------- ---------- ---------- ---------- ----------
Rhodopseud.palus ---------C TCA-GGGGGT AGAGC--ACT GGATGGGCT- ---------- ---------- ---------- ---------- ---------- ----------
Rickettsia.ricke ---------C ATC-GAAGGT AGAGC--ACT GAATGAGCT- ---------- ---------- ---------- ---------- ---------- ----------
Bordetella.bronc ---------T GCA-GGGGGT AGAGC--ACT GTTATGGCT- ---------- ---------- ---------- ---------- ---------- ----------
Escherichi.coli ---------C TCC-GGGGGT AGAGC--ACT GTTTCGGCA- ---------- ---------- ---------- ---------- ---------- ----------
Haemophilu.influ ---------C TTT-GGGGGT AGAGC--ACT GTTTCGGCT- ---------- ---------- ---------- ---------- ---------- ----------
Thermus.therm ---------T GGG-GCCTGT AGAGC--ACT GATAGGGCT- ---------- ---------- ---------- ---------- ---------- ----------
Thermotoga.marit ---------T GCA-GGGGGT AGAGC--ACT GATGGGGCT- ---------- ---------- ---------- ---------- ---------- ----------
Zea.mays.CP ---------A TCT-AGGGGT AAAGC--ACT GTTTCGGTG- ---------- ---------- ---------- ---------- ---------- ----------
nChlamydomo.reinh.CP --------TG TCT-TGGGGT AAAGC-TACT GTTTCGATG- ---------- ---------- ---------- ---------- ---------- ----------
Euglena.graci.CP ---------C ATT-AGGGGT AAAGC--ACT GTTTCGATG- ---------- ---------- ---------- ---------- ---------- ----------
Desulfuroc.mobil --------GG CCA-CGGGGT AGAGC-TACG GATCGGGGAT ---------- ---------- ---------- ---------- ---------- ----------
Sulfolobus.acido --------GC TCG-CGGGGT AGAGT-GACA GATCGGGGGC ---------- ---------- ---------- ---------- ---------- ----------
Thermofilu.pende --------GC CGG-TTGGGT AGGGC--ACT GATTGGGAGT ---------- ---------- ---------- ---------- ---------- ----------
Thermoprot.tenax --------TC CGG-CGGGGT AGAGC--ACT GATCGAGGGC ---------- ---------- ---------- ---------- ---------- ----------
Halobacter.halob --------GT TCG-TGGGGT AGAGC-GACC GATTGGGGAG ---------- ---------- ---------- ---------- ---------- ----------
Halobacter.maris --------GT CTG-TGAGGT AGAGC-GACC GATTGGTGTG ---------- ---------- ---------- ---------- ---------- ----------
Halococcus.morrh --------GT TCG-TGGGGT AGAGC-GACC GATTGGAGGG ---------- ---------- ---------- ---------- ---------- ----------
Natronobac.magad --------GT TCA-TGGGGT AGAGC-GACG GATTGGGGGA ---------- ---------- ---------- ---------- ---------- ----------
Methanococ.vanni --------GT CGG-CAGGGT AGAGC--ACT GATAAGATGG ---------- ---------- ---------- ---------- ---------- ----------
Methanococ.janna --------GA TGG-CGGGGT AGAGC-CACG GATAGGGTGT ---------- ---------- ---------- ---------- ---------- ----------
Xenopus.laevi CGTCGCAGTT TTA-TCCGGT AAAGC-GAAT GATTAGAGG- ---------- ---------- ---------- ---------- ---------- ----------
Homo.sapie CCACGCAGTT TTA-TCCGGT AAAGC-GAAT GATTAGAGG- ---------- ---------- ---------- ---------- ---------- ----------
Candida.albic -----CAGTT TTA-TGAGGT AAAGC-GAAT GATTAGAAG- ---------- ---------- ---------- ---------- ---------- ----------
Saccharomy.cerev -----CAGTT TTA-TGAGGT AAAGC-GAAT GATTAGAGG- ---------- ---------- ---------- ---------- ---------- ----------
Schizosacc.pombe -----CAGTT TTA-TGAGGT AAAGC-GAAT GATTAGAGG- ---------- ---------- ---------- ---------- ---------- ----------
Oryza.sativ ----CGAGTT CTA-TCGGGT AAAGC-CAAT GATTAGAGG- ---------- ---------- ---------- ---------- ---------- ----------
Arabidopsi.thali ---GCGAGTT CTA-TCGGGT AAAGC-CAAT GATTAGAGG- ---------- ---------- ---------- ---------- ---------- ----------
Fragaria.anana ---ACGAGTT CTA-TCGGGT AAAGC-CAAT GATTAGAGG- ---------- ---------- ---------- ---------- ---------- ----------
Chlorella.ellip ----TCAGTT TTA-TCGGGT AAAGC-GAAT GATTAGAGG- ---------- ---------- ---------- ---------- ---------- ----------
nEuglena.graci GTGACTGGTT GCA-TCCGGT AAAGC-AACG CATGAGAGGC CAA------- ---------- ---------- ---------- ---------- ----------
Entamoeba.histo ----ATAGTA TTG-ATTGGT AAAGA-TAAT GATTAGGTG- ---------- ---------- ---------- ---------- ---------- ----------
nTrypanosom.bruce --AAGAAGTA TTG-TGCGGT AAAGC-AAAT GATTAGAGG- ---------- ---------- ---------- ---------- ---------- ----------
Giardia.intes ------AGTT GCG-GCCCGT AGAGC--GCT GGCCGGCGG- ---------- ---------- ---------- ---------- ---------- ----------
**********************
3001
Mycobacter.lepra ---------- ---------- ---------- ---------- ATGGGCCC-- -TACT--AGG TTACTGACG- ---TCAGCCA AACTCCGAAT -GCCGTGGTT
Streptomyc.grise ---------- ---------- ---------- ---------- ATGGGCCC-- -TACC--GGG TTACTGACC- ---TTAGCCA AACTCCGAAT -GCCGGTAAG
Bacillus.subti ---------- ---------- ---------- ---------- AGGGGCCC-- CTACC--GGG TTACCGAAT- ---TCAGTCA AACTCCGAAT -GCCAATGAC
Lactobacil.delbr ---------- ---------- ---------- ---------- AGGGGCCC-- GTCAA--GGG TTACTGAAT- ---TCAGATA AACTGCGAAT -TCCAGACAT
Leuconosto.mesen ---------- ---------- ---------- ---------- AGGGGCCC-- ATCTC--GGG TTACCAAAG- ---TTTGATA AACTCCGAAT -GCCAGATAT
Staphyloco.aureu ---------- ---------- ---------- ---------- AGGGGCCC-- CTCTC--GGG TTACCGAAT- ---TCAGACA AACTCCGAAT -GCCAATTA-
Bartonella.bacil ---------- ---------- ---------- ---------- AGGGGTCC-- TCACC--GGA TTACCAAAC- ---CTAACCA AACTCCGAAT -ACCTGGAA-
Rhodopseud.palus ---------- ---------- ---------- ---------- AGGGGGAC-- TTACC--GTC TTACCAAAC- ---CCAACCA AACTCCGAAT -ACCTGAGA-
Rickettsia.ricke ---------- ---------- ---------- ---------- AGGGGGTC-- CCACA--GAC TTACCAAAC- ---TCAATCA AACTCCGAAT -GTCGATGA-
Bordetella.bronc ---------- ---------- ---------- ---------- AGGGGGTC-- ATGGC--GAC TTACCAAAC- ---CATGGCA AACTCCGAAT -ACCTGCAA-
Escherichi.coli ---------- ---------- ---------- ---------- AGGGGGTC-- ATCCC--GAC TTACCAACC- ---CGATGCA AACTGCGAAT -ACCGGAGA-
Haemophilu.influ ---------- ---------- ---------- ---------- AGGGGGCC-- ATCCC--GGC TTACCAACC- ---CGATGCA AACTACGAAT -ACCAAAGA-
Thermus.therm ---------- ---------- ---------- ---------- AGGGGGCC-- -CACC--AGC CTACCAAAC- ---CCTGTCA AACTCCGAAG -GGTCCCAG-
Thermotoga.marit ---------- ---------- ---------- ---------- A--GGGGG-- -GTTT--CCT CCG---AAC- ---CCCGTCA AACTCCGAAT -CCCTGCA--
Zea.mays.CP ---------- ---------- ---------- ---------- CG-GCTGC-- -GCGA--GCG GTACCAAAT- ---CGAGGCA AACTCTGAAT -ACTAGATAT
nChlamydomo.reinh.CP ---------- ---------- ---------- ---------- CGGGCTGC-- -GAAA--GCG GTACCAAGT- ---CGTGGCA AACTCAGAAT -ACAAGACAT
Euglena.graci.CP ---------- ---------- ---------- ---------- CGGGCTAT-- -GAAA--ATG GTACCAAGT- ---TGTGGCA AACTCTGAAT -ACTAAGTTA
Desulfuroc.mobil ---------- ---------- ---------- ---------G CGGAGGCC-- -GAAA--GGC CTCG-GTCC- ---CCGGTCC AACTCCGAAC -CTGTGGCC-
Sulfolobus.acido ---------- ---------- ---------- ---------- -TCCAGGC-- -GAAA--GCC TGGG-GCTT- ---CCGGTCT AACTCCGAAC -CCACGAGC-
Thermofilu.pende ---------- ---------- ---------- ---------C CGGGGACC-- -GAAA--GGT CCCA-GCTC- ---CCTTTCA AACCCCGAAC -CGACCGGC-
Thermoprot.tenax ---------- ---------- ---------- ---------G CAGGGCCC-- -GAAA--GGG TCCG-GCCC- ---TCGGTCA AACTCCGAAC -CCGCCGGA-
Halobacter.halob ---------- ---------- ---------- ---------T TCAACTCC-- -GAGA--GGA GTTGTCTCC- ---CCTGTCA AACTCCAAAC -CTACGGAC-
Halobacter.maris ---------- ---------- ---------- ---------T CCGCCTCC-- -GAGA--GGA GTCGGCACA- ---CCTGTCA AACTCCAAAC -TTACAGAC-
Halococcus.morrh ---------- ---------- ---------- ---------A CCGACTCC-- -GAGA--GGA GTCGGCCCT- ---CCTGTCG AACTCCGAAC -CTACGAAC-
Natronobac.magad ---------- ---------- ---------- ---------C CGCACTCC-- -GAGA--GGA GTGCGCCCC- ---CCTGTCC AACTCCGAAC -CTATGAAC-
Methanococ.vanni ---------- ---------- ---------- ---------T TAGGGGAA-- -GAAA--TTC CTCG-CTGT- ---TTTGTCA AACTCCGAAC -CTGTCGTC-
Methanococ.janna ---------- ---------- ---------- ---------T TAGGGGGC-- -GAGA--GCC CTCG-GCAC- ---CCTGTCA AACTCCGAAC -CCGTCATC-
Xenopus.laevi ---------- ---------- ---------- --------TC TTGGGGCCG- -AAA--CGAT CTCAA-CCTA ---TT-CTCA AACTTTAAAT -GGGTAAGAA
Homo.sapie ---------- ---------- ---------- --------TC TTGGGGCCG- -AAA--CGAT CTCAA-CCTA ---TT-CTCA AACTTTAAAT -GGGTAAGAA
Candida.albic ---------- ---------- ---------- --------TC TTGGGGTTG- -AAA--TGAC CTTAA-CTTA ---TT-CTCA AACTTTAAAT -ATGTAAGAA
Saccharomy.cerev ---------- ---------- ---------- --------TT CCGGGGTCG- -AAA--TGAC CTTGA-CCTA ---TT-CTCA AACTTTAAAT -ATGTAAGAA
Schizosacc.pombe ---------- ---------- ---------- --------TC TTGGGGAAG- -GAA--TTTC CTCAA-CCTA ---TT-CTCA AACTTTAAAT -ATGTAAGAC
Oryza.sativ ---------- ---------- ---------- --------CA TCGGGGGCG- -CAA--CGCC CTCGA-CCTA ---TT-CTCA AACTTTAAAT -AGGTAGGAC
Arabidopsi.thali ---------- ---------- ---------- --------CA TTGGGGGCG- -CAA--CG-C CTCGA-CCTA ---TT-CTCA AACTTTAAAT -AGGTAGGAC
Fragaria.anana ---------- ---------- ---------- --------CA TCGGGGCCG- -CAA--CGCC CTCGA-CCTA ---TT-CTCA AACTTTAAAT -AGGTAGGAC
Chlorella.ellip ---------- ---------- ---------- --------TA CCGGGGAAG- -AAA--CTTC CTCGA-CCTA ---TT-CTCA AACTTTAAAT -AGGTAAGAC
nEuglena.graci ---------- ---------- ---------- --------CC CTGGGGAGC- -CCA--GCTC CTCAA-CCTA ---TC-CTCG AACTGTGAAT -GGGTGCGGA
Entamoeba.histo ---------- ---------- ---------- --------TA ATGGGTGAG- -TATA-TTCA CTCAA-CATC ---TT-GTCA AACTATGAAT -AAACAAAGA
nTrypanosom.bruce ---------- ---------- ---------- --------CA TTGGTGTTC- -TTG--TAAT ATCGA-CCTA ---TT-CTCA AACTTTAAAT -GTGCAAACA
Giardia.intes ---------- ---------- ---------- --------GA GCGGGGGG-- -CCTG--CCC CTCGC-CCGC ---CC-CCCA AACTCCGAAG -GGCCGCGCC
**************
3101
Mycobacter.lepra ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- --TAAA----
Streptomyc.grise ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- --TGAG----
Bacillus.subti ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---TTA----
Lactobacil.delbr ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---TT-----
Leuconosto.mesen ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---GT-----
Staphyloco.aureu ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---ATT----
Bartonella.bacil ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---GAA----
Rhodopseud.palus ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---GTA----
Rickettsia.ricke ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---GTA----
Bordetella.bronc ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---GTA----
Escherichi.coli ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---ATG---T
Haemophilu.influ ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---GTG----
Thermus.therm ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---GTG----
Thermotoga.marit ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---CAC---A
Zea.mays.CP -------GAC CCA------- ---------- ---------- AAAATAAC-- ---------- ---------- ---------- --------AG GG-GTC----
nChlamydomo.reinh.CP ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---GTC---T
Euglena.graci.CP ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---TAT---T
Desulfuroc.mobil ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---ACCGT-A
Sulfolobus.acido ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---GCCGA-A
Thermofilu.pende ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---ACCGT-A
Thermoprot.tenax ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---ACCGT-G
Halobacter.halob ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---GCCGT-C
Halobacter.maris ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---GCCGTTT
Halococcus.morrh ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---GCCGT-C
Natronobac.magad ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---GTCGTTC
Methanococ.vanni ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---GCCGT--
Methanococ.janna ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---GCCGT--
Xenopus.laevi -------GCC CGG-CTC--- ---------- ---------- GCTGGCTTG- ---------- ---------G AGCCG-GGC- ---------- GTGGAATGCG
Homo.sapie -------GCC CGG-CTC--- ---------- ---------- GCTGGCGTG- ---------- ---------G AGCCG-GG-- ---------- GTGGAATGC-
Candida.albic -------GTC CTT-GTT--- ---------- ---------- GCTTAATTG- ---------- ---------A ACGTG-GAC- ---------A ATTGAATGAA
Saccharomy.cerev -------GTC CTT-GTT--- ---------- ---------- ACTTAATTG- ---------- ---------A ACGTG-GAC- ---------A TTTGAATGAA
Schizosacc.pombe -------GCC CTT-GTC--- ---------- ---------- GCTTAATTG- ---------- ---------G ACGTG-GGC- ---------C ATCGAATG-A
Oryza.sativ -------GGC GCG-GCT--- ---------- ---------- GCTCCGGTG- ---------- ---------A GCCGC-GCC- ---------- ACGGAATCGG
Arabidopsi.thali -------GTG TCG-GCT--- ---------- ---------- GCTTTGTTG- ---------- ---------A GCCGT-CAC- ---------- ACGGAATCGA
Fragaria.anana -------GGC GCG-GCT--- ---------- ---------- GCTTTGTTG- ---------- ---------A GCCGC-GCC- ---------- ATGGAATCGA
Chlorella.ellip -------GTC TGA-GTT--- ---------- ---------- GCTTAATTG- ---------- ---------A ACTCA-GGC- ---------- ATTCAAT-GA
nEuglena.graci CAACCCAGGC ATGCTTCTTT GCCACGACAG GAGGCTG--- TGTAACAG-- --CAGTTCTC CCCGTCTTCT GAGCATGTT- ---------C GTTGAACAAT
Entamoeba.histo -------AGA ATTCTCA--- ---------- ---------G TGTTAAATA- ---------- ----CACTTC AGGAA-TTT- ---------- AAATATAAAC
nTrypanosom.bruce ------ACCC AGC-CTTAGT T--------- ---------- ---ATTTT-- ---------- ---AACAAGG CTTTT-GGG- ------TACA TAAGAATT--
Giardia.intes -------GCC --CCGCC--- ---------- ---------- GCTGGCCTG- ---------- ---------- GGCGG-GGC- ---------- GGGCGAATGC
3201
Mycobacter.lepra -AGCGTGGC- AGT-GAGA-- -CGGC--GGG GGATAAGCTC CGTACGTCGA A-AGGGAA-- --ACAGCCCA GATCGCC--- --GGCT-AAG GCCCCTAA--
Streptomyc.grise -AGCACGGC- AGT-GAGA-- -CTGT--GGG GGATAAGCTC CAT-GGTCGA G-AGGGAA-- --ACAGCCCA GAGCATC--- --GACT-AAG GCCCCTAA--
Bacillus.subti -TCCTTGGG- AGT-CAGA-- -CTGC--GAG TGATAAGATC CGT-AGTCGA A-AGGGAA-- --ACAGCCCA GACCGCC--- --AGCT-AAG GTCCCAAA--
Lactobacil.delbr ATGTGCGGG- AGT-CAGA-- -CTGC--GAG TGATAAGATC CGT-AGTCGA A-AGGGAA-- --ACAGCCCA GATCACC--- --AGTT-AAG GTCCCAAA--
Leuconosto.mesen ATGAATGGG- AGT-CAGA-- -CGAT--GAG TGATAAGATC CAC-CGTCGA A-AGGGGA-- --ACAGCCCA GATCGCC--- --AGTT-AAG GTCCCTAA--
Staphyloco.aureu TAACTTGGG- AGT-CAGA-- -ACAT--GGG TGATAAGGTC CGT-GTTCGA A-AGGGAA-- --ACAGCCCA GACCACC--- --AGCT-AAG GTCCCAAA--
Bartonella.bacil CTGACTGGC- AGA-CACA-- -CGGC--GGG TGCTAACGTC CGT-CGTGGA A-AGGGCA-- --ACAACCCT AACCACC--- --ATCT-AAG GTCCCCAA--
Rhodopseud.palus CTATCCGGG- AGT-CACA-- -CGGC--GGG TGCTAACGTC CGT-CGTGGA G-AGGGAA-- --ACAACCCT GACCTAC--- --AGCT-AAG GCCCCCAA--
Rickettsia.ricke CAGCATAGC- AGA-CAGA-- -CTAT--GGG TGCTAAGGTC CAT-AGTCGA G-AGGGAA-- --AAAGCCCA GACCGCC--- --ATCT-AAG GTCCCTAA--
Bordetella.bronc CAGCTTGGG- AGA-CAGA-- -CGACC-GGG TGCTAACGTC CGG-ACTCAA G-AGGGAA-- --ACAACCCA GACCGCC--- --AGCT-AAG GTCCCGAA--
Escherichi.coli TATCACGGG- AGA-CACA-- -CGGC--GGG TGCTAACGTC CGT-CGTGAA G-AGGGAA-- --ACAACCCA GACCGCC--- --AGCT-AAG GTCCCAAA--
Haemophilu.influ ATACTCAGG- AGA-CACA-- -CGGC--GGG TGCTAACGTC CGT-CGTGGA G-AGGGAA-- --ACAACCCA GACCGCC--- --AGCT-AAG GTCCCCAA--
Thermus.therm GAGCCTGGG- AGT-GAGG-- -GCGC--GAG CGATAACGTC CGC-GTCCGA GCGCGGGA-- --ACAACCGA GACCGCC--- --AGCT-AAG GCCCCCAA--
Thermotoga.marit AAGCCCGGG- AGT-GAGC-- -CCGC--GGG GGATAAGCTC CGC-GGACGA G-AGGGGA-- --ACAACCCA GACCGCC--- --GGCT-AAG GGCCCGAA--
Zea.mays.CP AAGGTCGGCC AGT-GAGA-- -CGAT--GGG GGATAAGCTT CAT-CGTCGA G-AGGGAA-- --ACAGCCCG GATCACC--- --AGCT-AAG GCCCCTTA--
nChlamydomo.reinh.CP TCCGTAAACC AGT-GAGA-- -CAGT--GGG GGATAAGCTT CAT-TGTCAA G-AGGGAA-- --ACAGCCCA GATCACC--- --AGCT-AAG GCCCCTAA--
Euglena.graci.CP TCAATTAATC AGT-GAGA-- -CAGT--GGG GGATAAGCTT CAT-TGTCAA G-AGGGAA-- --ACAGCCCA GATCACT--- --ACTT-AAG GCCCCTAA--
Desulfuroc.mobil GATGGCGGG- AGT-GGGG-- -TTCC-CCGG CG-TAAGGTT GGG-GGCCGC G-AGGGGA-- --ACAACCCA GACCGG---- --GGTT-AAG GCCCCAAA--
Sulfolobus.acido GAAGGGGGG- AGT-GGGT-- -CACT--CGG CG-TAAGGTT GGG-TGGCAA A-AGGGGA-- --ACAACCCA GACCTG---- --GGTT-AAG GCCCCAAA--
Thermofilu.pende GATGGGCGG- AGA-CGGG-- -TTCT-GGCG GA-TAAGCCG CCA-GGCCGA G-AGGGGA-- --ACAACCCA GACCGG---- --GGTT-AAG GCCCCCAA--
Thermoprot.tenax GAAGGGGGG- AGG-CGGG-- -GCCA-GTGG GG-TAAGCCT CTG-GCCCGA G-ACGGGA-- --ACAACCGG GACCGG---- --GGTT-AAG GCCCCTAA--
Halobacter.halob GACGCAGGG- AAT-CCGG-- -TGTG--CGG GG-TAAGCCT GTG-CACCGT G-AGGGAG-- --ACAACCCA GAGTTA---- --GGTT-AAG GTCCCAAA--
Halobacter.maris GACGCGGGG- ATT-CCGG-- -TGCG--CGG GG-TAAGCCT GTG-TACCAG G-AGGGGA-- --ACAACCCA GAGATA---- --GGTT-AAG GTCCCCAA--
Halococcus.morrh GACGCGGGG- AGA-GCGG-- -TGTG--CGG GG-TAAGCCT GTG-CACCAT G-AGGGAG-- --ACAACCCA GAGCTT---- --GGTT-GAG GTCCCCAA--
Natronobac.magad GACGCAGGG- AGT-CCGG-- -TGCA--CGG GG-TAAGCCT GTG-TACCGT A-AGGGAG-- --ACAACCCA GAGCTG---- --GGTT-AAG GTCCCAAA--
Methanococ.vanni -AGGCTCTG- AGT-GAGG-- -GCAT--ACG GG-TAAGCTG TAT-GTCCGA G-ACGGGA-- --ATAGCCGA GACTTG---- --GGTT-AAG GCCCCTAA--
Methanococ.janna -AGCCCCCG- AGT-GAGG-- -GCAT--ACG GG-TAAGCCG TAT-GTCCGA G-AGGGGA-- --ACAACCCG GACCCG---- --GGTT-AAG GCCCCTAA--
Xenopus.laevi AGCACGCCT- AGT-GGGC-- -CAC--TTTT GG-TAAGCAG AAC-TGGCGC T-GCGGGA-- --TGAACCGA ACGCCG---- --GGTT-AAG GCGCCCGAT-
Homo.sapie GA-GTGCCT- AGT-GGGC-- -CAC--TTTT GG-TAAGCAG AAC-TGGCGC T-GCGGGA-- --TGAACCGA ACGCCG---- --GGTT-AAG GCGCCCGAT-
Candida.albic GA-GCTTTT- AGT-GGGC-- -CAT--TTTT GG-TAAGCAG AAC-TGGCGA T-GCGGGA-- --TGAACCGA ACGTGA---- --AGTT-AAA GTGCCGGA--
Saccharomy.cerev GA-GCTTTT- AGT-GGGC-- -CAT--TTTT GG-TAAGCAG AAC-TGGCGA T-GCGGGA-- --TGAACCGA ACGTAG---- --AGTT-AAG GTGCCGGA--
Schizosacc.pombe GA-GTTTCT- AGT-GGGC-- -CAT--TTTT GG-TAAGCAG AAC-TGGCGA T-GCGGGA-- --TGAACCGA ACGTGA---- --GGTT-AAG GTGCCGGA--
Oryza.sativ GA-GCTCCA- AGT-GGGC-- -CAT--TTTT GG-TAAGCAG AAC-TGGCGA T-GCGGGA-- --TGAACCGG AAGCCT---- --GGTT-ACG GTGCCGAA--
Arabidopsi.thali GA-GCTCCA- AGT-GGGC-- -CAT--TTTT GG-TAAGCAG AAC-TGGCGA T-GCGGGA-- --TGAACCGG AAGCCG---- --GGTT-ACG GTGCCCAA--
Fragaria.anana GA-GCTCCA- AGT-GGCA-- -CAT--TTTT GG-TAAGCAG AAC-TGGCGA T-GCGGGA-- -CTGAACCGG AAGCCG---- --GGTT-ACG GTGCCCAA--
Chlorella.ellip GA-GCTCCA- AGT-GGGC-- -CAT--TTTT GG-TAAGCAG AAC-TGGCGA T-GCGGGA-- --TGAACCGA AAGTCG---- --AGTT-AAG GTGCCCGA--
nEuglena.graci GG-ATCCTA- CGT-GGAC-- -CAT--GACT GG-TAAGCAG TGC-TGGTGA T-GCGGGG-- --TGCTCCGA GAGCAG---- --ACTT-ACA GATCCCGA--
Entamoeba.histo AT-ACTTTG- AAT-CGGC-- -CAA--GTCT GG-TAAGCAG GAC-TGGCGA T-GCGGGA-- --TGAACCGA ACGTCG---- --AGAT-AAA GTGCCAAA--
nTrypanosom.bruce GAGGCACCA- AGT-GGGC-- -CTT--CTTC GG-TAAGCGG AGC-AGGCGA T-GCGGAA-- --TGAACCGC TTAGGG---- --ATAT-GTG GCGTCAAAAC
Giardia.intes GG-GCGGCG- CGT-GGGC-- -CCC--TCCT GG-TAAGCAG GAC-GGGCGA G-GCGGGA-- --CGATCCGG ACGCCG---- --GGCC-AGG GTGCGCCG--
******** ************************************************
3301
Mycobacter.lepra GCG-TGTGCT -AAGT-GGAA ---------- -AAGGA-TGT -GCAG-TCGC AAAGACAACC AGGAGGTTGG CTTAGA-AGC A-GCCAC-CC TTGAAAGAGT
Streptomyc.grise GCG-TACGCT -AAGT-GGGA ---------- -AAGGA-TGT -GGAG-TCGC AGAGACAACC AGGAGGTTGG CTTAGA-AGC A-GCCAC-CC TTGAAAGAGT
Bacillus.subti GTA-TACGTT -AAGT-GGAA ---------- -AAGGA-TGT -GGAG-TTGC TTAGACAACC AGGATGTTGG CTTAGA-AGC A-GCCAC-CA TTTAAAGAGT
Lactobacil.delbr ATT-CATGCT -AAGT-GGAA ---------- -AAGGA-TGT -GGAG-TTGC GCAGACAACT AGGACGTTGG CTCAGA-AGC A-GCCAT-CA TTCAAAGAGT
Leuconosto.mesen ATA-TATGTT -AAGT-GGAA ---------- -AACGA-TGT -GATA-GTGC ATAGACAACT AGGATGTTGG CTTAGA-AGC A-GCCAC-CA TTTAAAGAGT
Staphyloco.aureu ATA-TATGTT -AAGT-GGAA ---------- -AAGGA-TGT -GGCG-TTGC CCAGACAACT AGGATGTTGG CTTAGA-AGC A-GCCAT-CA TTTAAAGAGT
Bartonella.bacil GTT-ATGGCT -AAGT-GGGA ---------- -AAGGA-TGT -GAGG-ATCC CAAAACAACC AGGATGTTGG CTTAGA-AGC A-GCCAT-CA TTTAAAGAAA
Rhodopseud.palus TTC-GTGGCT -AAGT-GGGA ---------- -AAGGA-TGT -GGAA-ATCC CAAAACAACC AGGAGGTTGG CTTAGA-AGC A-GCCAT-CC TTTAAAGAAA
Rickettsia.ricke ATC-ATGACT -AAGT-GTTA ---------- -AAGGA-TGT -GAGA-AGAC CAAAACAACT AGGATGTTGG CTTAGA-AGC A-GCCAT-CA TTTAAAGAAA
Bordetella.bronc TTA--TCGCT -AAGT-GGGA ---------- -AACGA-AGT -GGGA-AGGC ATAGACAGTC AGGAGGTTGG CTTAGA-AGC A-GCCAC-CC TTTAAAGAAA
Escherichi.coli GTC-ATGGTT -AAGT-GGGA ---------- -AACGA-TGT -GGGA-AGGC CCAGACAGCC AGGATGTTGG CTTAGA-AGC A-GCCAT-CA TTTAAAGAAA
Haemophilu.influ GTC-TATATT -AAGT-GGGA ---------- -AACGA-AGT -GGGA-AGGC TTAGACAGCT AGGATGTTGG CTTAGA-AGC A-GCCAT-CA TTTAAAGAAA
Thermus.therm GTC-TGGGCT -AAGT-GGTA ---------- -AAGGA-TGT -GGCG-CCGC GAAGACAGCC AGGAGGTTGG CTTAGA-AGC A-GCCAT-CC TTTAAAGAGT
Thermotoga.marit GAG-GTGGCT -AAGT-GGTA ---------- -AAGGA-TGT -GGAG-CGCC TAAGACAGCT GGGATGTTGG CTTAGA-AGC A-GCCAT-CA TTTAAAGAGT
Zea.mays.CP ATG-ACCGCT -CAGT-GATA ---------- -AAGGA-GGT -GGGG-GTGC AAAGACAGCC ATGAGGTTTG CCTAGA-AGC A-GCCAC-CC TTTAAAGAGT
nChlamydomo.reinh.CP ATG-GTCACT -AAGT-GGAA ---------- -AAGGA-TGT -GAGA-ATGC TGAAACAACC AGGAGGTTTG CTTAGA-AGC A-GCCAC-CC TTCAAAGAGT
Euglena.graci.CP ATA-ATTACC TAAGT-GGTA ---------- -AACCA-TGT -ACTA-TTAC ATAGACAACC AGGAGGTTGG CTTAGA-AGC A-GCCATTCC TTTAAAAAGT
Desulfuroc.mobil GTG-CCGGCT -AAGTGCTAA -------CCA AAAGGG-CGT -CCCG-CGGC TTAGACAGCG GGGAGGTGGG CCTAAC-AGC A-GCCAT-CC TTTAAAGAGT
Sulfolobus.acido GTC-CCGGCT -AAGTGCCAA --------CG AAAAGG-CGT -CTCC-AGCC TTAGACAGCG GGAAGGTGGG CCCAGC-AGC A-GCCAT-CC TCTAAGGAGT
Thermofilu.pende GTG-CCGGCT AAAGTGTCAA G-----CCAG -AAGGG-TGT -CCCC-CGCC TTAGACAGCG GGGCCGTAGG CTTAGA-AGC A-GCCAT-CG GCTAAGAAGT
Thermoprot.tenax GTG-CGGGCT -AAGTGTCAA C------GGG TAAGGG-CGT -CCCC-TGCC CAAGACAGCG GGGCCGTGGG CCTAAC-AGC A-GCCAT-CG GCCAAGCAAC
Halobacter.halob GTG-CGAGCT -AAGTGCGA- -------TTG -AAGGT-GGT -CTCG-AGCC CTAGACAGCC GGGAGGTGAG CTTAGA-AGC A-GCTAC-CC TCTAAGAAAA
Halobacter.maris GTG-TGGATT -AAGTGTAAT C----CTCTG -AAGGT-GGT -CTCG-AGCC CTAGACAGCC GGGAGGTGAG CTTAGA-AGC A-GCTAC-CC TCTAAGAAAA
Halococcus.morrh GTG-TGGACT -AAGTGCGA- -------TCG -AAGGT-GGT -TCCG-AGCC ATAGACAGCC GGGAGGTGAG CTTAGA-AGC A-GCTAC-CC GCTAAGAAAA
Natronobac.magad GTG-TGGATT -AAGTGCGAT C--------G -AAGGT-GGT -CTCA-AGCC CTAGACAGCC GGGAGGTGAG CTTAGA-AGC A-GCTAC-CC TCTAAGAAAA
Methanococ.vanni ATG-CCGATT -AAGTGTGAA ------CACG -AAGGG-CGT -CCTT-GGTC TAAGACAGCA GGGAGGTTGG CTTAGA-AGC A-GCCAC-CC TTTAAAGAGT
Methanococ.janna GTG-CCGGCT -AAGTGTAAA ------TGAG -AAGGG-AGT -CCCT-GGCC TAAGACAGCG GGGAGGTTGG CTTAGA-AGC A-GCCAT-CC TTTAAAGAGT
Xenopus.laevi GCC-GACGCT -CA--TCAGA C----CCCAG AAAAGG-TGT -TGGT-TGAT ATAGACAGCA GGACGGTGGC CATGGA-AGT C-GGAAT-CC GCTAAGGAGT
Homo.sapie GCC-GACGCT -CA--TCAGA C----CCCAG AAAAGG-TGT -TGGT-TGAT ATAGACAGCA GGACGGTGGC CATGGA-AGT C-GGAAT-CC GCTAAGGAGT
Candida.albic ATG-CACGCT -CA--TCAGA C----ACCAC AAAAGG-TGT -TAGT-TCAT CTAGACAGCC GGACGGTGGC CATGGA-AGT C-GGAAT-CC GCTAAGGAGT
Saccharomy.cerev ATA-CACGCT -CA--TCAGA C----ACCAC AAAAGG-TGT -TAGT-TCAT CTAGACAGCC GGACGGTGGC CATGGA-AGT C-GGAAT-CC GCTAAGGAGT
Schizosacc.pombe ATG-TACGCT -CA--TCAGA C----ACCAG AAAAGG-TGT -TAGT-TCAT CTAGACAGCA GGACGGTGGC CATGGA-AGT C-GGAAT-CC GCTAAGGAGT
Oryza.sativ CTG-CGCGCT -AAC-CTAGA A----CCCAC AAAGGG-TGT -TGGT-CGAT TAAGACAGCA GGACGGTGGT CATGGA-AGT C-GAAAT-CC GCTAAGGAGT
Arabidopsi.thali CTG-CGCGCT -AAC-CTAGA A----CCCAC AAAGGG-TGT -TGGT-CGAT TAAGACAGCA GGACGGTGGT CATGGA-AGT C-GAAAT-CC GCTAAGGAGT
Fragaria.anana CTA-CGCGCT -AAC-CTAGA A----CCCAC AAAGGG-TGT -TGGT-CGAT TAAGACAGCA GGACGGTGGT CATGGA-AGT C-GAAAT-CC GCTAAGGAGT
Chlorella.ellip CTG-TGCGCT -AAC-CTAGA T----CCCAC AAAGAG-TGT -TGGT-TGAT ATAGACAGCA GGACGGTGGT CATGGA-AGT C-GAAAT-CC GCTAAGGAGT
nEuglena.graci GTG-CTGGCT CATACTCAGA T----CCCAC AAAGGA-TGT -TGCT-TACT ACGGATAGCA GGTCGGTGGC CATGAA-GGT T-GGAAC-CC GCTGAGGAAT
Entamoeba.histo -AA-GAAACA -TAA---CGA G---TACCAC AAAAGG-TAT -TCAT-TCAT ATTGACAATA GGACGGTGGC CATGGA-AGT C-GGAAA-CC GCTAAGGAAT
nTrypanosom.bruce TTG-TGGGCT -CATTCTCGA T----ACGTG AAAAGGGTGT -TGGT-GGAT AGGGACAGTT GGACGGTGGC CATGGA-AGT C-GGCAT-CC GCTAAGGAGT
Giardia.intes -CC-GGGGC- -CC------- -------GCG GAACGG-CGT -CGGC-CGGT CCCGACAGCT GGAAGGTGGC CCCAGA-AGT C-GGCAT-CC TCCAGGGAGT
********* *****************************************************
3401
Mycobacter.lepra --GCGTAATA GC---TCACT GGT------- ---------- -CAA-----G TGATTGT--- ---------- ---------- ---------- ---GCGCCGA
Streptomyc.grise --GCGTAATA GC---TCACT GGT------- ---------- -CAA-----G TGATTCC--- ---------- ---------- ---------- ---GCGCCGA
Bacillus.subti --GCGTAATA GC---TCACT GGT------- ---------- -CGA-----G TGACTCT--- ---------- ---------- ---------- ---GCGCCGA
Lactobacil.delbr --GCGTAATA GC---TCACT AGT------- ---------- -CGA-----G TGACGCC--- ---------- ---------- ---------- ---GCGCCGA
Leuconosto.mesen --GCGTAATA GC---TCACT AGT------- ---------- -CGA-----G TGCCATT--- ---------- ---------- ---------- ---GCGCGGA
Staphyloco.aureu --GCGTAATA GC---TCACT AGT------- ---------- -CGA-----G TGACACT--- ---------- ---------- ---------- ---GCGCCGA
Bartonella.bacil --GCGTAACA GC---TCACT GGT------- ---------- -CTAAATAAG GGTCTTT--- ---------- ---------- ---------- ---GCGCCGA
Rhodopseud.palus --GCGTAACA GC---TCACT GGT------- ---------- -CTAAATAAG GGTTTCT--- ---------- ---------- ---------- ---GCGCCGA
Rickettsia.ricke --GCGTAATA GC---TCACT AGT------- ---------- -CTAAATAAG TTTTCTT--- ---------- ---------- ---------- ---GCGCCAA
Bordetella.bronc --GCGTAATA GC---TCACT GAT------- ---------- -CGA-----G TCGTCCT--- ---------- ---------- ---------- ---GCGCGGA
Escherichi.coli --GCGTAATA GC---TCACT GGT------- ---------- -CGA-----G TCGGCCT--- ---------- ---------- ---------- ---GCGCGGA
Haemophilu.influ --GCGTAATA GC---TCACT AGT------- ---------- -CGA-----G TCGGCCT--- ---------- ---------- ---------- ---GCGCGGA
Thermus.therm --GCGTAATA GC---TCACT GGT------- ---------- -CGA-----G TGGCGCC--- ---------- ---------- ---------- ---GCGCCGA
Thermotoga.marit --GCGTAACA GC---TCACC AGC------- ---------- -CGA-----G GCGCTCT--- ---------- ---------- ---------- ---GCACCGA
Zea.mays.CP --GCGTAATA GC---TCACT GAC------- ---------- -TG------G CGCCCTT--- ---------- ---------- ---------- ---GCGCTGA
nChlamydomo.reinh.CP --GCGTAATA GC---TCACT GGT------- ---------- -AAA-----G CGTTCTT--- ---------- ---------- ---------- ---GCGCCGA
Euglena.graci.CP --GCGTAATA GC---TTACT GGT------- ---------- -CAA-----G TGATAGT--- ---------- ---------- ---------- ---GCGCCGA
Desulfuroc.mobil --GCGTAACA GC---TCACC CGC------- ---------- -CGA-----G CCGCGGG--- ---------- ---------- ---------- ---GCCCCGA
Sulfolobus.acido --GCGTAACA GC---TCACC CGC------- ---------- -CGA-----G GCTGGAG--- ---------- ---------- ---------- ---GCCCTAA
Thermofilu.pende --GCGTAACA GC---TTACC CGC------- ---------- -CGA-----G GCGGGGG--- ---------- ---------- ---------- ---GCCCCGA
Thermoprot.tenax --GCGTAACA GC---GGACC CGC------- ---------- -CGA-----G GCAGGGG--- ---------- ---------- ---------- ---GCCCCGT
Halobacter.halob --GCGTAACA GC---TTACC GGC------- ---------- -CGA-----G GTTCGAG--- ---------- ---------- ---------- ---GCGCCCA
Halobacter.maris --GCGTAACA GC---TTACC GGC------- ---------- -CGA-----G GTTTGAG--- ---------- ---------- ---------- ---GCGCCCA
Halococcus.morrh --GCGTAACA GC---TTACC GGC------- ---------- -CGA-----G GTTTGGA--- ---------- ---------- ---------- ---GCGCCGA
Natronobac.magad --GCGTAACA GC---TTACC GGC------- ---------- -CGA-----G GTTTGAG--- ---------- ---------- ---------- ---GCGCCCA
Methanococ.vanni --GCGTAACA GC---TCACC TGT------- ---------- -CGA-----G ATCAAGG--- ---------- ---------- ---------- ---GCCCCGA
Methanococ.janna --GCGTAACA GC---TCACC CGT------- ---------- -CGA-----G GTCAGGG--- ---------- ---------- ---------- ---GCCCCGA
Xenopus.laevi --GTGTAACA AC---TCACC TGC------- ---------- -CGA-----A TCAACTA--- ---------- ---------- ---------- ---GCCCTGA
Homo.sapie --GTGTAACA AC---TCACC TGC------- ---------- -CGA-----A TCAACTA--- ---------- ---------- ---------- ---GCCCTGA
Candida.albic --GTGTAACA AC---TCACC GGC------- ---------- -CGA-----A TGAACTA--- ---------- ---------- ---------- ---GCCCTGA
Saccharomy.cerev --GTGTAACA AC---TCACC GGC------- ---------- -CGA-----A TGAACTA--- ---------- ---------- ---------- ---GCCCTGA
Schizosacc.pombe --GTGTAACA AC---TCACC TGC------- ---------- -CGA-----A TGAACTA--- ---------- ---------- ---------- ---GCCCTGA
Oryza.sativ --GTGTAACA AC---TCACC TGC------- ---------- -CGA-----A TCAACTA--- ---------- ---------- ---------- ---GCCCCGA
Arabidopsi.thali --GTGTAACA AC---TCACC TGC------- ---------- -CGA-----A TCAACTA--- ---------- ---------- ---------- ---GCCCCGA
Fragaria.anana --GTGTAACA AC---TCACC TGC------- ---------- -CGA-----A TCAACTA--- ---------- ---------- ---------- ---GCCCCGA
Chlorella.ellip --GTGTAACA AC---TCACC TGC------- ---------- -CGA-----A TCAACTA--- ---------- ---------- ---------- ---GCCTCGA
nEuglena.graci --GTGTAACA AC---TCACC TGC------- ---------- -CGA-----A GTGCGCA--- ---------- ---------- ---------- ---GCTCCGA
Entamoeba.histo --GTGTAACA AC---TCACC TAT------- ---------- -CGA-----A TGAATGA--- ---------- ---------- ---------- ---GTCCTGA
nTrypanosom.bruce --GTGTAACA AC---TCACC AAC------- ---------- -CGA-----A TCCACCG--- ---------- ---------- ---------- ---GCCCCGA
Giardia.intes --GTGTAACA AC---CCACC AGC------- ---------- -CGA-----A TCGGCCG--- ---------- ---------- ---------- ---GCCCGGA
********************* *******
3501
Mycobacter.lepra TAA-TGTAGC GGGGCTCAAG CACACC---- ---------- ---------- ---------- ---------- GCCGAAGCCG CGG-CACAT- TCACCT----
Streptomyc.grise CAA-TGTAGC GGGGCTCAAG CGTACC---- ---------- ---------- ---------- ---------- GCCGAAGTCG TGT-CATTC- GTACATGTAT
Bacillus.subti AAA-TGTACC GGGGCT-AAA CGTATC---- ---------- ---------- ---------- ---------- ACCGAAGCTG CGG-ACTGT- TC--------
Lactobacil.delbr AAA-TTTACC GGGGCT-AAG CATGAT---- ---------- ---------- ---------- ---------- ACCGAAACTG TGG-ATGTG- CA--------
Leuconosto.mesen AAA-TGTACC GGGGCT-AAA CATATT---- ---------- ---------- ---------- ---------- ACCGAAACTG CGG-G-TGC- AC--------
Staphyloco.aureu AAA-TGTACC GGGGCT-AAA CATATT---- ---------- ---------- ---------- ---------- ACCGAAGCTG TGG-ATTGT- CC--------
Bartonella.bacil AAA-TGTAAC GGGGCTAAAG CCATAC---- ---------- ---------- ---------- ---------- ACCGAAGCTG TGG-ATTTA- CTC-------
Rhodopseud.palus AGA-TGTAAC GGGGCTCAAG CCACGA---- ---------- ---------- ---------- ---------- GCCGAAGCTT AGG-GTGTG- C---------
Rickettsia.ricke CAA-TGTAAC GGGGCTCAAG TCATGT---- ---------- ---------- ---------- ---------- ACCGAAGATG CGG-GTTTA- T---------
Bordetella.bronc AGA-TGTAAC GG--CT-AAG CGATAA---- ---------- ---------- ---------- ---------- ACCGAAGCTG CGG-GTGTG- CA--------
Escherichi.coli AGA-TGTAAC GGGGCT-AAA CCATGC---- ---------- ---------- ---------- ---------- ACCGAAGCTG CGG-CAGCG- ACGC------
Haemophilu.influ AGA-TGTAAC GGGGCTGAAA TATAGC---- ---------- ---------- ---------- ---------- ACCGAAGCTG CGG-CATCA- GAAT------
Thermus.therm AAA-TGATGC GGGGCTTAAG CCCAGC---- ---------- ---------- ---------- ---------- GCCGAAGCTG CGG-GTCTG- GGG-------
Thermotoga.marit AAA-TGTAAC GGGGCTCAAG CCACCC---- ---------- ---------- ---------- ---------- CCCGAAGCCG CGG-GTCAG- TACCTCC---
Zea.mays.CP AGA-TG-AAC GGGGCT-AAG CGATCT---- ---------- ---------- ---------- ---------- GCCGAAGCTG TGG-GATGT- ----------
nChlamydomo.reinh.CP TAA-TG-GCC GGGACT-AAG TGACCT---- ---------- ---------- ---------- ---------- GCCGAAGCTG TGA-TATAA- TTTAT-----
Euglena.graci.CP AAA-TG-AAC GGGACT-AAG TAATTT---- ---------- ---------- ---------- ---------- GCCGAAGGTG TGA-GA---- ----------
Desulfuroc.mobil AGATTG-GTC GGGGCTCAAG CCGGCC---- ---------- ---------- ---------- ---------- GCCGAGACCC CGG-GGCAC- GGCTCC----
Sulfolobus.acido AGATTG-GTC GGGGCTCAAG CCGGGC---- ---------- ---------- ---------- ---------- GCCGAGACCC AGG-AGGGGT TCTCT-----
Thermofilu.pende AGA-T-TACC GGGACT-AAG CCGGCC---- ---------- ---------- ---------- ---------- GCCGAGACCC CGG-GGCAC- CCCGC-----
Thermoprot.tenax AGA-TGTAGA GGGACTCAAG CCCGCC---- ---------- ---------- ---------- ---------- GCCGAGACCC CGG-GCCTC- CGGCC-----
Halobacter.halob AAA-TG-ATC GGGGCTTAAG TTCGCC---- ---------- ---------- ---------- ---------- ACCGAGACCT AAC-GGCAC- GG--------
Halobacter.maris AAA-TG-ATC GGGACTCAAA TCCACC---- ---------- ---------- ---------- ---------- ACCGAGACCT GTC-CGTAC- CG--------
Halococcus.morrh AAA-TG-ATC GGGGCTCAAG TCCACC---- ---------- ---------- ---------- ---------- ACCGATACCT AGC-GGCGC- ACT-------
Natronobac.magad AAA-TG-ATC GGGGCTCAAA TCCACC---- ---------- ---------- ---------- ---------- ACCGAGACCG AGC-CGTAC- CC--------
Methanococ.vanni AAA-TG-GAC GGGGCT-AAA TCGGCT---- ---------- ---------- ---------- ---------- GCCGAGACCC AAG-GGCAC- C---------
Methanococ.janna AGA-TA-ACG GGGGCT-AAG CCGGCC---- ---------- ---------- ---------- ---------- GCCGAGACCC GGG-GGGGC- T---------
Xenopus.laevi AAA-TG-GAT GGCGCTGGAG CGTCGG---- ---------- ---------- ---------- ---------- GCCCATACCC GGC-CGTCGC CGGCGCTGGG
Homo.sapie AAA-TG-GAT GGCGCTGGAG CGTCGG---- ---------- ---------- ---------- ---------- GCCCATACCC GGC-CGTCGC CGGCAGTCGA
Candida.albic AAA-TG-GAT GGCGCTCAAG CGTGCT---- ---------- ---------- ---------- ---------- ACTTATACTT CAC-CGTGA- TTGC------
Saccharomy.cerev AAA-TG-GAT GGCGCTCAAG CGTGTT---- ---------- ---------- ---------- ---------- ACCTATACTC TAC-CGTCA- GGGT------
Schizosacc.pombe AAA-TG-GAT GGCGCTTAAG CGTACT---- ---------- ---------- ---------- ---------- ACCCATACCT CAC-CGTCT- GGGT------
Oryza.sativ AAA-TG-GAT GGCGCTGAAG CGCG------ ---------- ---------- ---------- ---------- ACCCACAC-A GGC-CATCT- GGGC------
Arabidopsi.thali AAA-TG-GAT GGCGCTTAAG CGCG------ ---------- ---------- ---------- ---------- ACCTATACCC GGC-CGTCG- GGGC------
Fragaria.anana AAA-TG-GAT GGCGCTTAAG CGCGTG---- ---------- ---------- ---------- ---------T ACCTATACCC GGC-CGTCG- GGGC------
Chlorella.ellip AAA-TG-GAT GGCGCTTAAG CGCACG---- ---------- ---------- ---------- ---------- ACCTATACTC GGC-CATGG- AGGC------
nEuglena.graci AAA-TG-GAT GGTGCCCAAG TCAGTG---- ---------- ---------- ---------- ----TGTCTC CCTTACAGTC TGC-CATCG- ATGT------
Entamoeba.histo AAA-TG-GAT GGCATTATAA TTTCTT---- ---------- ---------- ---------- ---------A ACTGATACTC GAC-CGTTA- AAATG-----
nTrypanosom.bruce AAA-TG-GAT GACGCTTAAG CCCCAT---- ---------- ---------- ---------- GTGCGTGATT GCCCATTATT CCT-TTGGT- GAGG------
Giardia.intes AAA-TG-GAG CGCGCCGGAG CCCCGG---- ---------- ---------- ---------- ---------- ACCCGCGCCC GGC-CGCCG- ----------
*********************** ****
3601
Mycobacter.lepra ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Streptomyc.grise CCC------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Bacillus.subti ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Lactobacil.delbr ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Leuconosto.mesen ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Staphyloco.aureu ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Bartonella.bacil ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Rhodopseud.palus ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Rickettsia.ricke ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Bordetella.bronc ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Escherichi.coli ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Haemophilu.influ ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Thermus.therm ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Thermotoga.marit ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Zea.mays.CP ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
nChlamydomo.reinh.CP ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Euglena.graci.CP ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Desulfuroc.mobil ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Sulfolobus.acido ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Thermofilu.pende ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Thermoprot.tenax ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Halobacter.halob ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Halobacter.maris ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Halococcus.morrh ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Natronobac.magad ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Methanococ.vanni ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Methanococ.janna ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Xenopus.laevi TCAGTCC--- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Homo.sapie -GAGTGGACG GGAGCGGCGG GGGCGGC--- ----GGCGCG CGCGCGCGTG TG---GTGTG CGTCGGAGGG CGGCGGCGGC GGCGGCGGCG GGGGTGTGGG
Candida.albic ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Saccharomy.cerev ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Schizosacc.pombe ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Oryza.sativ ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Arabidopsi.thali ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Fragaria.anana ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Chlorella.ellip ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
nEuglena.graci ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Entamoeba.histo ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
nTrypanosom.bruce ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Giardia.intes ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
3701
Mycobacter.lepra ---------- ---------- ---------- ---------- ---------- ---------- ---TCTA--- ---------- ---------- ---GGGTGGA
Streptomyc.grise ---------- ---------- ---------- ---------- ---------- ---------- ---CAAC--- ---------- ---------- -GGGAGTACG
Bacillus.subti ---------- ---------- ---------- ---------- ---------- ---------- ---TTC---- ---------- ---------- -------GAA
Lactobacil.delbr ---------- ---------- ---------- ---------- ---------- ---------- ---TTTA--- ---------- ---------- -------TGC
Leuconosto.mesen ---------- ---------- ---------- ---------- ---------- ---------- ---GTAA--- ---------- ---------- ----------
Staphyloco.aureu ---------- ---------- ---------- ---------- ---------- ---------- ----TTT--- ---------- ---------- -------GGA
Bartonella.bacil ---------- ---------- ---------- ---------- ---------- ---------- ---TTAT--- ---------- ---------- ------GAGT
Rhodopseud.palus ---------- ---------- ---------- ---------- ---------- ---------- ---GCAA--- ---------- ---------- --------GC
Rickettsia.ricke ---------- ---------- ---------- ---------- ---------- ---------- ---GCATTTG GC-------- ---------- --------AT
Bordetella.bronc ---------- ---------- ---------- ---------- ---------- ---------- --CTTTT--- ---------- ---------- -------AGT
Escherichi.coli ---------- ---------- ---------- ---------- ---------- ---------- ---TTAT--- ---------- ---------- -----GCGTT
Haemophilu.influ ---------- ---------- ---------- ---------- ---------- ---------- ---TTAT--- ---------- ---------- -------TCT
Thermus.therm ---------- ---------- ---------- ---------- ---------- ---------- --GATGA--- ---------- ---------- ------CCCC
Thermotoga.marit ---------- ---------- ---------- ---------- ---------- ---------- ---GCT---- ---------- ---------- --GGAGGTAC
Zea.mays.CP ---------- ---------- ---------- ---------- ---------- ---------- --CAAAAT-- ---------- ---------- ---------G
nChlamydomo.reinh.CP ---------- ---------- ---------- ---------- ---------- ---------- ---TAT---- ---------- ---------- ----ATAAAT
Euglena.graci.CP ---------- ---------- ---------- ---------- ---------- ---------- ---GAAA--- ---------- ---------- ----------
Desulfuroc.mobil ---------- ---------- ---------- ---------- ---------- ---------- ---GAT---- ---------- ---------- -GGAGCCGTG
Sulfolobus.acido ---------- ---------- ---------- ---------- ---------- ---------- ---ACT---- ---------- ---------- --AGAGATCC
Thermofilu.pende ---------- ---------- ---------- ---------- ---------- ---------- ---ATT---- ---------- ---------- --GCGGGGTG
Thermoprot.tenax ---------- ---------- ---------- ---------- ---------- ---------- ---GTT---- ---------- ---------- --GGCCGGAG
Halobacter.halob ---------- ---------- ---------- ---------- ---------- ---------- --GTAACA-- ---------- ---------- -----CCGTG
Halobacter.maris ---------- ---------- ---------- ---------- ---------- ---------- --CTCATA-- ---------- ---------- -----TGGTA
Halococcus.morrh ---------- ---------- ---------- ---------- ---------- ---------- ---GTAT--- ---------- ---------- ----AGTGC-
Natronobac.magad ---------- ---------- ---------- ---------- ---------- ---------- --CTGACA-- ---------- ---------- -----GGGTA
Methanococ.vanni ---------- ---------- ---------- ---------- ---------- ---------- ---GCAA--- ---------- ---------- ------GGTG
Methanococ.janna ---------- ---------- ---------- ---------- ---------- ---------- ---GAAA--- ---------- ---------- ------AGCC
Xenopus.laevi ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----GCGGGG GCTAGGCCGC
Homo.sapie GTCCTTCCCC CGCCCCCCCC CCCACGCCT- -------CCT CCCCTCCTCC CGCCCACGCC CCGCTCCCCG CCCCCGG-AG CCCCGCGGA- GCTACGCCGC
Candida.albic ---------- ---------- ---------- ---------- ---------- ---------T GTTTTGAC-- ---------- ---------- -----GCTTT
Saccharomy.cerev ---------- ---------- ---------- ---------- ---------- ---------- -TGATATGAT ---------- ---------- -----GCCCT
Schizosacc.pombe ---------- ---------- ---------- ---------- ---------- --------TA GCTTTGAGAA ---------- ---------- -----GCTCA
Oryza.sativ ---------- ---------- ---------- ---------- ---------- ---------- -GAGCGCCAT ---------- ---------- -----GCCCC
Arabidopsi.thali ---------- ---------- ---------- ---------- ---------- ---------- -AAGAGCCAG ---------- ---------- -----GCCTC
Fragaria.anana ---------- ---------- ---------- ---------- ---------- ---------- -AAGTGCCAG ---------- ---------- -----GCCCC
Chlorella.ellip ---------- ---------- ---------- ---------- ---------- ---------- -AAGTGCGAA ---------- ---------- -----GCCTC
nEuglena.graci ---------- ---------- ---------- ---------- ---------- -----GGCAG CCAAGGCAGA ---------- ---------- -----GCATC
Entamoeba.histo ---------- ---------- ---------- ---------- ---------- ---------- ---AAGA--- ---------- ---------- ----CATTTT
nTrypanosom.bruce ---------- ---------- ---------- --------GC GGCTATATTT -------CTT TGTGAGAAAG TGTAG----- ---------- -----CCCTC
Giardia.intes ---------- ---------- ---------- ---------- ---------- ---------- ---CGCG--- ---------- ---------- ---------C
3801
Mycobacter.lepra TGT-GGGTAG GGGAG-CG-- ------TTCC TCA------- ---------- ---------- ---------- ---------- ---------- ----------
Streptomyc.grise GAT-GGGTAG GGGAG-CG-- ------TCGT GTG------- ---------- ---------- ---------- ---------- ---------- ----------
Bacillus.subti CAG-TGGTAG GAGAG-CG-- ------TTCT AAG------- ---------- ---------- ---------- ---------- ---------- ----------
Lactobacil.delbr ACG-TGGTAG GAGAG-CG-- ------TTCT AGC------- ---------- ---------- ---------- ---------- ---------- ----------
Leuconosto.mesen GTG-CGATAG GAGAG-CG-- ------TTCT AAG------- ---------- ---------- ---------- ---------- ---------- ----------
Staphyloco.aureu CAA-TGGTAG GAGAG-CG-- ------TTCT AAG------- ---------- ---------- ---------- ---------- ---------- ----------
Bartonella.bacil AAG-TGGTAG CGGAG-CG-- ------TTCC GTAA------ ---------- ---------- ---------- ---------- ---------- ----------
Rhodopseud.palus ACG-CGGTAG CGGAG-CG-- ------TTCT GTAA------ ---------- ---------- ---------- ---------- ---------- ----------
Rickettsia.ricke AAA-TGGTAG CGGAG-CG-- ------TTCC GTAA------ ---------- ---------- ---------- ---------- ---------- ----------
Bordetella.bronc GCAGCGGTAG GAGAG-CG-- ------TTCT GTAA------ ---------- ---------- ---------- ---------- ---------- ----------
Escherichi.coli GTT-GGGTAG GGGAG-CG-- ------TTCT GTAA------ ---------- ---------- ---------- ---------- ---------- ----------
Haemophilu.influ GTT-GGGTAG GGGAG-CG-- ------TTGT GTAA------ ---------- ---------- ---------- ---------- ---------- ----------
Thermus.therm AGG-CGGTAG GGGAG-CG-- ------TTCC CGAT------ ---------- ---------- ---------- ---------- ---------- ----------
Thermotoga.marit TGG-CGGTAG GGGAG-CT-- ------TTCC GCTG------ ---------- ---------- ---------- ---------- ---------- ----------
Zea.mays.CP CAT-CGGTAG GGGAG-CG-- ------TTCC GCCT------ ---------- ---------- ---------- ---------- ---------- ----------
nChlamydomo.reinh.CP TAT-AGGTAG GGGAG-CG-- ------TTCC GCTC------ ---------- ---------- ---------- ---------- ---------- ----------
Euglena.graci.CP --T-CGGTAG AAGAG-CG-- ------TTCT GTGT------ ---------- ---------- ---------- ---------- ---------- ----------
Desulfuroc.mobil ATC-CGGTAG GCGGG-CG-- ------CCGG GTC------- ---------- ---------- ---------- ---------- ---------- ----------
Sulfolobus.acido -TC-TGGTAG GGGGG-CG-- ------CTGT GAT------- ---------- ---------- ---------- ---------- ---------- ----------
Thermofilu.pende ATC-CGGTAG GGGGG-CG-- ------TCCA GGT------- ---------- ---------- ---------- ---------- ---------- ----------
Thermoprot.tenax -TG-CGGTAG GGGGG-CG-- ------CGGC CGT------- ---------- ---------- ---------- ---------- ---------- ----------
Halobacter.halob ATC-CAGTAG GTTGG-CA-- ------TTCT GTT------- ---------- ---------- ---------- ---------- ---------- ----------
Halobacter.maris ATC-GAGTAG ATTGC-CG-- ------CTCT AAT------- ---------- ---------- ---------- ---------- ---------- ----------
Halococcus.morrh ATC-CAGTAG GTCGG-CG-- ------CTCC GTT------- ---------- ---------- ---------- ---------- ---------- ----------
Natronobac.magad ATC-GCGTAG GTTGG-CG-- ------TTCT GTT------- ---------- ---------- ---------- ---------- ---------- ----------
Methanococ.vanni ATC-CCGTAG GGGGG-CG-- ------TTCT GCG------- ---------- ---------- ---------- ---------- ---------- ----------
Methanococ.janna ATC-CGGTAG GGGGG-CG-- ------TCCC GCG------- ---------- ---------- ---------- ---------- ---------- ----------
Xenopus.laevi GAC-GAGTAG GAGGGCCG-- ------CCGC GGTGG----- ---------- ---------- ---------- ---------- ---------- ----------
Homo.sapie GAC-GAGTAG GAGGGCCG-- ------CTGC GGTGA----- ---------- ---------- ---------- ---------- ---------- ----------
Candida.albic CAC-GAGTAG GCAGG-CG-- ------TGGA GGTCA----- ---------- ---------- ---------- ---------- ---------- ----------
Saccharomy.cerev GAC-GAGTAG GCAGG-CG-- ------TGGA GGTCA----- ---------- ---------- ---------- ---------- ---------- ----------
Schizosacc.pombe GAC-GAGTAG GCAGG-CG-- ------TGGA GGTTT----- ---------- ---------- ---------- ---------- ---------- ----------
Oryza.sativ GAT-GAGTAG GAGGG-CG-- ------CGGC GGCC------ ---------- ---------- ---------- ---------- ---------- ----------
Arabidopsi.thali GAT-GAGTAG GAGGG-CG-- ------CGGC GGTC------ ---------- ---------- ---------- ---------- ---------- ----------
Fragaria.anana GAT-GAGTAG GAGGG-CG-- ------CGGC GGTC------ ---------- ---------- ---------- ---------- ---------- ----------
Chlorella.ellip CAT-GAGTAG GAGGG-CG-- ------TGGG TGTT------ ---------- ---------- ---------- ---------- ---------- ----------
nEuglena.graci GTT-GTGTAG AAAGGGCA-- ------TGGA CAACA----- ---------- ---------- ---------- ---------- ---------- ----------
Entamoeba.histo AAC-GAGTAA GGAAA-CGAA ATGGCGTAAG GACAA----- ---------- ---------- ---------- ---------- ---------- ----------
nTrypanosom.bruce CCG-ATGTAG ACGTGGCG-- ------TGGG GGTGA----- ---------- ---------- ---------- ---------- ---------- ----------
Giardia.intes GGC-GGGTAG GAGGC-CG-- ------CAGA GGCCCC---- ---------- ---------- ---------- ---------- ---------- ----------
**************
3901
Mycobacter.lepra ---------- ---------- ---------- ------TTC- AGCGAAGCC- --TCCGG-GT AA--CCG--G TGG-TGGA-- -GG-GTGGGG AAGTGAGAAT
Streptomyc.grise ---------- ---------- ---------- ------CCG- GGTGAAGCA- --GCCGC-GG AA--GCGA-G TTG-TGGA-- -CG-GTTCAC GAGTGAGAAT
Bacillus.subti ---------- ---------- ---------- ------GGC- TGTGAAGCC- --AGACC-GG AA--GGA--C TGG-TGGA-- -GC-GCTTAG AAGTGAGAAT
Lactobacil.delbr ---------- ---------- ---------- ------GGC- GGTGAAGCA- --TGACC-GA GA--GGA--C ATG-TGGA-- -GC-TTCTAG AAGTGAGAAT
Leuconosto.mesen ---------- ---------- ---------- ------GGC- GACGAAGGT- --AGATC-GT AA--GGA--C TGC-TGGA-- -GC-GCTTAC AAGTGAGAAT
Staphyloco.aureu ---------- ---------- ---------- ------GGC- GTTGAAGCA- --TGATC-GT AA--GGA--C ATG-TGGA-- -GC-GCTTAG AAGTGAGAAT
Bartonella.bacil ---------- ---------- ---------- ------GCC- TGTGAAGGGA --GACTC-GC GA--GAGCTC C---TGGA-- -GG-TATCGG AAGTGAGAAT
Rhodopseud.palus ---------- ---------- ---------- ------GCC- TGCGAAGGGC --GACCC-GT GA--GGG--C GCC-TGGA-- -GG-TATCAG AAGTGCGAAT
Rickettsia.ricke ---------- ---------- ---------- ------GCC- TGCGAAGGT- --GAACC-GT AA--GGT--T TGC-TGGA-- -GG-TATCGG AAGTGAGAAT
Bordetella.bronc ---------- ---------- ---------- ------GCC- TGCGAAGGT- --GGCTT-GT AA--AGG--C TGC-TGGA-- -GG-TATCAG AAGTGCGAAT
Escherichi.coli ---------- ---------- ---------- ------GCC- TGCGAAGGT- --GTGCT-GT GA--GGC--A TGC-TGGA-- -GG-TATCAG AAGTGCGAAT
Haemophilu.influ ---------- ---------- ---------- ------GCG- GAAGAAGGT- --TCATC-GA GA--GGT--G GGC-TGGA-- -CG-TATCAC AAGTGCGAAT
Thermus.therm ---------- ---------- ---------- ------GCC- GATGAAGGC- C-GACCC-GC GA--GG---C GGC-TGGA-- -GG-TAAGGG AAGTGCGAAT
Thermotoga.marit ---------- ---------- ---------- ------TAG- GGTGAAGGC- G-GACCC-GC GA--GGG--C CGC-TGGA-- -CG-AGGCGG AAGTGAGAAT
Zea.mays.CP ---------- ---------- ---------- ------TAG- AGGGAAGCA- --AACGC-GA AA--GCG--G GGG-TCGA-- -CG-AAGCGG AAGCGAGAAT
nChlamydomo.reinh.CP ---------- ---------- ---------- ------TCG- GGTGAAGTT- --TTCAC-GT AA--GTG--G GGA-TGGA-- -CG-AAGCGG AAGTGAGAAT
Euglena.graci.CP ---------- ---------- ---------- ------TGA- AGAGAAGGA- --ATAGT-GA AA--ATA--G TTC-TGGA-- -TT-AAACAG AAGTGAGAAT
Desulfuroc.mobil ---------- ---------- ---------- ------GGG- GCAGAAGCC- --GGGCC-GT GA--GGT--C CGG-TGGA-- -CC-CGATCC GGGTGAAGAT
Sulfolobus.acido ---------- ---------- ---------- ------GGG- GTAGAAGGT- --GGGTC-GT GA--GAT--C CAC-TGGA-- -CC-CGTCAC AGGTGCAGAT
Thermofilu.pende ---------- ---------- ---------- ------GGA- CTGGAAGCC- --GGGCC-GT GA--GGT--C CGG-TGGA-- -TC-CGCCTG GAATGAAAAT
Thermoprot.tenax ---------- ---------- ---------- ------GGG- GCAGAAGCC- --GGGCC-GA GA--GGT--C CGG-TGGA-- -CC-CGCGGT CGACGAAGAT
Halobacter.halob ---------- ---------- ---------- ------CGG- GTGGAAGCT- --CGGGT-GA GA--ACT--C GAG-TGGA-- -CC-GAGTGG AAAAGAAAAT
Halobacter.maris ---------- ---------- ---------- ------TGG- ATGGAAGTA- --GGGGT-GA GA--GCT--C CTA-TGGA-- -CC-GATTAG TGACGAAAAT
Halococcus.morrh ---------- ---------- ---------- ------TGG- GTGGAAGTA- --CGGGC-GA GA--GTT--C GTA-TGGA-- -CC-GAACGG TGACGATAAT
Natronobac.magad ---------- ---------- ---------- ------CGG- GTGGAAGCA- --CGGAT-GA GA--ATT--C GTG-TGGA-- -CC-GTTCAG TAACGAAAAT
Methanococ.vanni ---------- ---------- ---------- ------AGG- GCAGAAGTT- --CGGCT-GT GA--AGT--C GAG-TGGA-- -CC-TCGTAG AAATGAAGAT
Methanococ.janna ---------- ---------- ---------- ------GGG- GTAGAAGCT- --CGGCC-GT GA--GGT--C GGG-TGGA-- -CC-CCGTGG GAACGAGAAT
Xenopus.laevi ---------- ---------- ---------- -------GC- GCGGAAGCCC C--GGGC-GA GG--GCC--C GGG-TGGA-- -GC-CGCCGC GGGTGCAGAT
Homo.sapie ---------- ---------- ---------- -------GC- CTTGAAGCCT A--GGGC-GC GG--GCC--C GGG-TGGAG- -GC-CGCCGC AGGTGCAGAT
Candida.albic ---------- ---------- ---------- -------GT- GACGAAGCCT T--TGCT-GT AA--AGC--T GGG-TCGA-- -AC-GGCCTC TAGTGCAGAT
Saccharomy.cerev ---------- ---------- ---------- -------GT- GACGAAGCCT A--GACC-GT AA--GGT--C GGG-TCGA-- -AC-GGCCTC TAGTGCAGAT
Schizosacc.pombe ---------- ---------- ---------- -------GT- GACGAAGCCT T--GGGC-GT GA--GCC--T GGG-TCGA-- -AC-AGCCTC TAGTGCAGAT
Oryza.sativ ---------- ---------- ---------- -------GC- G-CAAAACCC G--GGGC-GC GA--GCC--C GGG-CGGA-- -GC-GGCCGT CGGTGCAGAT
Arabidopsi.thali ---------- ---------- ---------- -------GC- TGCAAAACCT A--GGGC-GC GA--GGC--- --G-CGGA-- -GC-GGCCGT CGGTGCAGAT
Fragaria.anana ---------- ---------- ---------- -------GC- TCCAAAACCT ---GGGC-GT GA--GCC--C GGG-CGGA-- -GC-GGCCGT CGGTGCAGAT
Chlorella.ellip ---------- ---------- ---------- -------GT- GACGCAGCCT G--CGGC-GT GA--GCC--G GGG-TGAA-- -AC-AGCACC TAGTGCAGAT
nEuglena.graci ---------- ---------- ---------- -------GC- TGATCGTGTT G---GGA-TT GA--TCC--C GGCTTGAG-- -GC-GTTGCC CAGAGCAGAT
Entamoeba.histo ---------- ---------- ---------- --CAAAAGT- AGTAAAGATT ---TAAA-GT AA--TTT--A GAT-TGAA-- -AC-TGTCCT TAGTGCAGAT
nTrypanosom.bruce ---------- ---------- ---------- -------GG- AC-GAAGCCG A--TGGC-GC GA--GCC--T CGGATGGA-- -CC-CGCCTC TAGTGCAGAT
Giardia.intes ---------- ---------- ---------- -------GGG GGCGAAGGCG ---GCGC-GC AG--GCC--C CGC-CGGA-- -CC-GGCCTC TGGTGCAGAT
**** **** *********
4001
Mycobacter.lepra GCAGGCAT-G AGTA-GCGA- -TAAGGCAAG ---------- ---------T GAGAAC---- ---------- -----CTTGC C-CGCCGTA- AGACCAA-GG
Streptomyc.grise GCAGGCAT-G AGTA-GCGA- --TACACACG ---------- ---------T GAGAAA---- ---------- -----CGTGT G-CGCCGAT- TGACTAA-GG
Bacillus.subti GCCGGTAT-G AGTA-GCGA- --AAGAGGGG ---------- ---------T GAGAAT---- ---------- -----CCCCT C-CACCGAA- TGCCTAA-GG
Lactobacil.delbr GCCGGTAT-G AGTA-ACGA- --AAGACAGG ---------- ---------T GAGAAT---- ---------- -----CCTGT C-CGCCGCA- AGACTAA-GG
Leuconosto.mesen GCCGGTAT-G AGTA-GCGA- --AAG-CAGG ---------- ---------T GAGAAT---- ---------- -----CCTGT C-CACCGAA- TGACTAA-GG
Staphyloco.aureu GCCGGTGT-G AGTA-GCGA- --AAGACGGG ---------- ---------T GAGAAT---- ---------- -----CCCGT C-CACCGAT- TGACTAA-GG
Bartonella.bacil GCTGACAT-G AGTA-ACGA- -TAAAGGGAG ---------- ---------T GAGAGA---- ---------- -----CTCCC T-CGCCGAA- AGTCCAA-GG
Rhodopseud.palus GCTGGCAT-G AGTA-ACGA- -CAAACACTG ---------- ---------T GAAAGA---- ---------- -----CAGTG T-CGCCGAA- AGTCCAA-GG
Rickettsia.ricke GCTGACAT-A AGTA-GCGA- -TAAAGAATG ---------- ---------T NAGAAA---- ---------- -----CATTC T-CGCCGAA- AGTCCAA-GG
Bordetella.bronc GCTGACAT-G AGTA-GCCA- -TAAAGGGGG ---------- ---------T GAAAAG---- ---------- -----CCCCC T-CGCCGTA- AGTCCAA-GG
Escherichi.coli GCTGACAT-A AGTA-ACGA- -TAAAGCGGG ---------- ---------T GAAAAG---- ---------- -----CCCGC T-CGCCGGA- AGACCAA-GG
Haemophilu.influ GCTGACAT-A AGTA-ACGA- -TAAAACGGG ---------- ---------T GAAAAA---- ---------- -----CCCGT T-CGCCGGA- AGACCAA-GG
Thermus.therm GCCGGCAT-G AGTA-ACGA- -TAAAGAGGG ---------- ---------T GAGAAT---- ---------- -----CCCTC T-CGCCGTA- AGCCCAA-GG
Thermotoga.marit GCGGGCAT-G AGTACGCGA- --AAGGAGGG ---------- ---------T GAGAAT---- ---------- -----CCCTC C-CCCCGTA- AGCCCAA-GG
Zea.mays.CP GTCGGCTT-G AGTA-ACGA- -AAACATTGG ---------- ---------T GAGAAT---- ---------- -----CCAAT G-CCCCGAA- AACCCAA-GG
nChlamydomo.reinh.CP GTCGGCTT-G AGTA-ACGA- -AAACATTGG ---------- ---------T GAGAAT---- ---------- -----CCAAT G-CCCCGAA- AACCTAA-GG
Euglena.graci.CP GTCGGCTT-A AGTA-ACGA- -AAACATTGG ---------- ---------T GAAAAT---- ---------- -----CCTAT G-CTCCGAA- AACCTAA-GG
Desulfuroc.mobil CCCGGCGG-C AGTA-ACAGC -GAAGAGGGG ---------- ---------T GTGAAT---- ---------- -----CCCCT C-CGCCGGAA AGGGCAA-GG
Sulfolobus.acido CCCGGCGG-T AGTA-ACAGC -GAAGGGGGG ---------- ---------T GAGAAT---- ---------- -----CCCCC T-CGCCGGA- AGGGCAA-GG
Thermofilu.pende CCCGGCGG-T AGTA-AGAGC GCAAGAGGGG ---------- ---------T GAGAAT---- ---------- -----CCCCT C-CGCCGAA- AGGGCAA-GG
Thermoprot.tenax CCCGGCGG-T AGTA-GCAGC -GAAGAGGGG ---------- ---------T GAGAAG---- ---------- -----CCCCT C-CGCCGGAA AGGACCA-GG
Halobacter.halob CCTGGCCA-T AGTA-GCAGC GTTAGTCGGG ---------- ---------T AAGAAT---- ---------- -----CCCGA T-GGCCGAA- AGAGCAA-GG
Halobacter.maris CCTGGCCA-T AGTA-GCAGC GATAGTCGGG ---------- ---------T GAGAAC---- ---------- -----CCCGA C-GGCCTAA- TGGATAA-GG
Halococcus.morrh CCTGGCCA-C AGTA-GCAGC GGTAGTCGGG ---------- ---------T TAGAAA---- T--------- -----CCCGA C-GGCCTCA- CGGACAA-GG
Natronobac.magad CCTGGTCA-T AGTA-GCAGC GTTAGTCGGG ---------- ---------T TAGACC---- ---------- -----CCCGA C-GGCCGAA- CGAGTAA-GG
Methanococ.vanni CCCGGTAG-T AGTA-ACAGC ATAAGTGGGG ---------- ---------T GAGAAT---- ---------- -----CCCCA C-CGCCGAA- GGGGCAA-GG
Methanococ.janna CCCGGCAG-T AGTA-ACAGC A-AAGTGGGG ---------- ---------T GAGAAT---- ---------- -----CCCCA C-CGCCGAA- GGGGCCA-GG
Xenopus.laevi CTTGGTGG-T AGTA-GCAA- -ATATTCAAA ---------- ---------C GAGAAC---- ---------- -----TTTGA A-GGCCGAAG TGGAGAA-GG
Homo.sapie CTTGGTGG-T AGTA-GCAA- -ATATTCAAA ---------- ---------C GAGAAC---- ---------- -----TTTGA A-GGCCGAAG TGGAGAA-GG
Candida.albic CTTGGTGG-T AGTA-GCAA- -ATATTCAAA ---------- ---------T GAGAAC---- ---------- -----TTTGA A-GACTGAAG TGGGGAA-AG
Saccharomy.cerev CTTGGTGG-T AGTA-GCAA- -ATATTCAAA ---------- ---------T GAGAAC---- ---------- -----TTTGA A-GACTGAAG TGGGGAA-AG
Schizosacc.pombe CTTGGTGG-A AGTA-GCAA- -ATATTCAAA ---------- ---------T GAGAAC---- ---------- -----TTTGA A-GACTGAAG TGGGGAA-AG
Oryza.sativ CTTGGTGG-T AGTA-GCAA- -ATATTCAAA ---------- ---------T GAGAAC---- ---------- -----TTTGA A-GGCCGAAG AGGAGAA-AG
Arabidopsi.thali CTTGGTGG-T AGTA-GCAA- -ATATTCAAA ---------- ---------T GAGAAC---- ---------- -----TTTGA A-GGCCGAAG AGGGGAA-AG
Fragaria.anana CTTGGTGG-T AGTA-GCAA- -ATATTCAAA ---------- ---------T GAGAAC---- ---------- -----TTTGA A-GGCCGAAG AGGGGGA-AG
Chlorella.ellip CTTGGTGG-T AGTA-GCAA- -ATATTCAAA ---------- ---------T GAGAAC---- ---------- -----TTTGA A-GACTGAAG TGGAGAA-AG
nEuglena.graci CTTGGTTG-T AGTA-GCGA- -GTACTCCAC CTGGAGAGGA GTGG-----C AACACA---- ACCCCGCTGT GTGCGGTTGA G-GACTGGAG TGGAGCA-GG
Entamoeba.histo CTTGGTGG-T AGTA-GCAA- -ATACTAAGA ---------- ---------A GAGGAA---- AAAAACA--- -----TCTTA G-AACTGAAG AGGAGAA-AG
nTrypanosom.bruce CTTGGTTG-G CGTA-GCAA- -AGATCTAAC G------GAA TATT-----T TTTCTT---- AAATGCAA-- ----CGTTGG A-TACTGGAG CGGGGAA-GG
Giardia.intes CTCGGCAG-C AGTA-GCCG- -CTACTCCG- ---------- ---------- -CGCCC---- ---------- ------CGGA G-GACTGAGG GGGAGAC-GG
******************** *******************
4101
Mycobacter.lepra GTTCCTGGG- -CCAGGCCAG TCC-GCCCAG GGTGAG---- ---------- ------TCGG G-ACCTAAGG CGAG-GCC-- -GACA----G GCGT------
Streptomyc.grise GTTCCTGGG- -TCAAGCTGA TCT-GCCCAG GGTAAG---- ---------- ------TCGG G-ACCTAAGG CGAG-GCC-- -GACA----G GCGT------
Bacillus.subti TTTCCTGAG- -GAAGGCTCG TCC-GCTCAG GGTTAG---- ---------- ------TCGG G-ACCTAAGC CGAG-GCC-- -GAAA----G GCGT------
Lactobacil.delbr TTTCCTGGG- -GCAGGCTCG TCC-GCCCAG GGTAAG---- ---------- ------TCGG G-ACCTAAGG CGAG-GCC-- -GAGA----G GCGT------
Leuconosto.mesen TTTCCTGGG- -GAAGGCTCG TCC-ACCCAG GGTTAG---- ---------- ------TCGG G-ACCTAAGG CGAG-GCT-- -GAGA----A GCGT------
Staphyloco.aureu TTTCCAGAG- -GAAGGCTCG TCC-GCTCTG GGTTAG---- ---------- ------TCGG G-TCCTAAGC TGAG-GCC-- -GACA----G GCGT------
Bartonella.bacil GTTCCTGCT- -TAAAGTTAA TCT-GAGCAG GGTGAG---- ---------- ------TCGG C-CCCTAAGG CGAG-GCC-- -GAAA----G GCGT------
Rhodopseud.palus GTTCCTGCG- -TAAAGTTAA TCT-TCGCAG GGTTAG---- ---------- ------CCGG T-CCCTAAGG CGAG-GCC-- -GAAA----G GCGT------
Rickettsia.ricke GTTCTTGCG- -TAAAGTTAT TCT-GCGCAA GGTTAG---- ---------- ------TCGG C-CCCTAAGA TGAG-GCT-- -GAAA----G GCGT------
Bordetella.bronc TTTCCTGCG- -CAACGTTCA TCG-GCGCAG GGTGAG---- ---------- ------TCGG C-CCCTAAGG CGAG-GCA-- -GAGA----T GCGT------
Escherichi.coli GTTCCTGTC- -CAACGTTAA TCG-GGGCAG GGTGAG---- ---------- ------TCGA C-CCCTAAGG CGAG-GCC-- -GAAA----G GCGT------
Haemophilu.influ GTTCCTGTC- -CAACGTTAA TCG-GGGCAG GGTGAG---- ---------- ------TCGG C-TCCTAAGG CGAG-GCT-- -GAAA----A GCGT------
Thermus.therm GTTCCTACG- -CAATGGTCG TCA-GCGTAG GGTTAG---- ---------- ------GCGG G-ACCTAAGG TGAA-GCC-- -GAAA----G GCGT------
Thermotoga.marit GTACCTGGG- -GAAGGTTCG TCC-GCCCAG GGTTAG---- ---------- ------CCGG GACCCTAAGG TGAA-CCC-- -GAAA----G GGGT------
Zea.mays.CP TTTCCTCCG- -CAAGGTTCG TCC-ACGGAG GGTGAG---- ---------- ------TCAG G-GCCTAAGA TCAG-GCC-- -GAAA----G GCTA------
nChlamydomo.reinh.CP GTTCCTCCA- -CTAGGTTCG TCC-ATGGGG GGTTAG---- ---------- ------TCAG G-ACCTAAGA CTAG-GCC-- -AAAC----G GCGT------
Euglena.graci.CP TTTCCTTAG- -CCAGGTTCG TCC-TCTAAG GGTTAG---- ---------- ------TCAG G-TCCTAAAA TAAG-GTT-- -TAAC----A ACGTA-----
Desulfuroc.mobil GTTCCTCGG- -CAACGGTCG TCG-GCCGAG GGTTAG---- ---------- ------CCGG --TCCTAACC CGGG-CCG-- TAACA----C GGA-------
Sulfolobus.acido GATTCCCGG- -CAACGTTCG TCA-GCCGGG AGTTAG---- ---------- ------CCGG --TCCTAAGG TAGG-GCC-- TAATA----G GTA-------
Thermofilu.pende GTTCCTCAG- -CAACGGTCG TCG-GCTGAG GGTTAG---- ---------- ------CCGG --TCCTAAGG CGGC-CCT-- TAAC-----C GGT-------
Thermoprot.tenax TTTTCCCGG- -CAACTACAA TAG-GCTGGG AGTTAG---- ---------- ------CCGG --TCCTAAGG CGGG-GCC-- TAGCT----G GCA-------
Halobacter.halob GTTCCTCGG- -CAATGCTTA TCA-GCCGAG GGTTAG---- ---------- ------CCGA --TCCTAAGG CCCG-TCG-- TAATT----C GAG-------
Halobacter.maris GTTCCTCAG- -CACTGCTGA TCA-GCTGAG GGTTAG---- ---------- ------CCGG --TCCTAAGT CATA-CCG-- CAACT----C GAC-------
Halococcus.morrh GTTCCTCGG- -CAATGTTCG TCA-ACCGAG GGTTAG---- ---------- ------CCGG --TCCTCAGT CTTA-CCG-- CAGTT----C GAG-------
Natronobac.magad GTTCCTCAG- -CAATGCTGA TCA-GCTGAG GGTTAG---- ---------- ------CCGG --TCCTAAGT CTGC-CCG-- TAAGT----C GAA-------
Methanococ.vanni GTTCCACAG- -CAATGTTTG TCA-GCTGTG GGTAAG---- ---------- ------CCGG --TCCTAACT CTCG-AGG-- TAACT----C CTT-------
Methanococ.janna TTTCCACAG- -CAACGGTCG TCA-GCTGTG GGTTAG---- ---------- ------CCGG --TCCTAACC CCCG-GGG-- TAATT----C CCT-------
Xenopus.laevi GTTCCATGT- -GAACAGCAG TTG-AACATG GGTCAG---- ---------- ------TCGG --TCCTAAGA GATG-GGC-- -GAGC----G CCGTTCGGAA
Homo.sapie GTTCCATGT- -GAACAGCAG TTG-AACATG GGTCAG---- ---------- ------TCGG --TCCTGAGA GATG-GGC-- -GAGC----G CCGTTCCGAA
Candida.albic GTTCCATGT- -CAACAGCAG TTG-GACATG GGTTAG---- ---------- ------TCGA --TCCTAAGA GATG-GGG-- -AAGC----T CCGTTTCAAC
Saccharomy.cerev GTTCCACGT- -CAACAGCAG TTG-GACGTG GGTTAG---- ---------- ------TCGA --TCCTAAGA GATG-GGG-- -AAGC----T CCGTTTCAAA
Schizosacc.pombe GTTCCATGT- -GAACAGCAG TTG-GACATG GGTTAG---- ---------- ------TCGA --TCCTAAGA GATA-GGG-- -AAGC----T CCGTATGAAA
Oryza.sativ GTTCCATGT- -GAACGGCAC TTG-CACATG GGTAAG---- ---------- ------CCGA --TCCTAAGG GACG-GGG-- -TAAC----C CCGGCAGAGA
Arabidopsi.thali GTTCCATGT- -GAACGGCAC TTG-CACATG GGTTAG---- ---------- ------TCGA --TCCTAAGA GTCG-GGG-- -GAAA----C CCGTCTGATA
Fragaria.anana GTTCCATGT- -GAACGGCAC TTG-CACATG GGTTAG---- ---------- ------TCGA --TCCTAAGA GACT-GGG-- -TAAC----C CCGTCTGATA
Chlorella.ellip GTTCCATGT- -GAACAGCAA TTG-GACATG GGTTAG---- ---------- ------TCGA --TCCTAAGA GATG-GGG-- -TAAT----C CTGTATCAAG
nEuglena.graci TTTCCACACC -AAACAGCCG TTG-AATGTG GGTCAA---- ---------- ------CCGA --CCGTGAGC CAAG-TGG-- TAAGT----T CACCGAACAA
Entamoeba.histo GTTCCTAAA- -CAACATTAC TTG-GATTAG GGTGAA---- ---------- ------TCGA --TCCTAAAT TACA-GAT-- -GGAA----A TCCTTAAGAA
nTrypanosom.bruce ATTTCGTGC- -CAACGGCAC TCG-TACACG AGTTGT---- ---------- ------TCGG TCACTGAGCA CA---ACG-- TTACAC---C GTTTTGTTAG
Giardia.intes GTTCCGCGG- -CGCCTGCAT CTG-GCCGCG GGTGAC---- ---------- ------TCGG --GCCTAAGC GGCG-GGT-- -GAAG----A CCGGGAAG--
***** **********************************************
4201
Mycobacter.lepra ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Streptomyc.grise ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Bacillus.subti ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Lactobacil.delbr ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Leuconosto.mesen ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Staphyloco.aureu ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Bartonella.bacil ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Rhodopseud.palus ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Rickettsia.ricke ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Bordetella.bronc ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Escherichi.coli ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Haemophilu.influ ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Thermus.therm ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Thermotoga.marit ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Zea.mays.CP ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
nChlamydomo.reinh.CP ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Euglena.graci.CP ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Desulfuroc.mobil ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Sulfolobus.acido ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Thermofilu.pende ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Thermoprot.tenax ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Halobacter.halob ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Halobacter.maris ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Halococcus.morrh ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Natronobac.magad ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Methanococ.vanni ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Methanococ.janna ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Xenopus.laevi GG-------- --GACGGGCG ATGG------ ---------- ---------- ---------- ---------- -----CCT-- ---------- ----------
Homo.sapie GG-------- --GACGGGCG ATGG------ ---------- ---------- ---------- ---------- -----CCT-- ---------- ----------
Candida.albic GT-------- --GCTTGA-- ---------- ---------- ---------- ---------- ---------- -----TTTT- ---------- ----------
Saccharomy.cerev G--------- --GCCTGAT- ---------- ---------- ---------- ---------- ---------- -----TTT-- ---------- ----------
Schizosacc.pombe GTT------- --GCACGA-- ---------- ---------- ---------- ---------- ---------- -----TTT-- ---------- ----------
Oryza.sativ G--------- --CGCG---- ---------- ---------- ---------- ---------- ---------- ---ACCACG- ---------- ----------
Arabidopsi.thali G--------- --CGC----- ---------- ---------- ---------- ---------- ---------- -----TTAA- ---------- ----------
Fragaria.anana ---------- --CGCG---- ---------- ---------- ---------- ---------- ---------- ----TCTCG- ---------- ----------
Chlorella.ellip ---------- --GGTGC--- ---------- ---------- ---------- ---------- ---------- ----AATTA- ---------- ----------
nEuglena.graci CCAAA----- --GCTGCCT- ---------- ---------- ---------- ---------- ---------- ----CCGGGC ---------- ----------
Entamoeba.histo A--------- --TATATAAG TGAC------ ---------- ---------- ---------- ---------- ----ATATA- ---------- ----------
nTrypanosom.bruce GAAAGTGAAG GTGGTCGGCG CACATCTCCC T--------- ---------- ---------- ---------- ----TTTTT- ---------- ---------G
Giardia.intes ---------- --GGG----- ---------- ---------- ---------- ---------- ---------- -----CGTG- ---------- ----------
4301
Mycobacter.lepra ---------- ---------- -----AGTC- GAT--GGA-C AACGGG---- --------TT GATATT-CCC GTACCCGTGT GTGTGCGCCC --G-TGA---
Streptomyc.grise ---------- ---------- -----AGTC- GAT--GGA-C AACCGG---- --------TT GATATT--CG GTACCCGCTT TGAAACGCCC --AGTAC---
Bacillus.subti ---------- ---------- -----AGGC- GAT--GGA-C AACAGG---- --------TT GATATT-CCT GTACCACCTC CTCACC---- ----------
Lactobacil.delbr ---------- ---------- -----AGTC- GAT--GGA-C AACAGG---- --------TT GAAATT-CCT GTACTGCACC GAATCG---- ----------
Leuconosto.mesen ---------- ---------- -----AGTC- GAT--GGA-T AACAGG---- --------TT GAGATT-CCT GTACCAGTTG TAATGC---- ----------
Staphyloco.aureu ---------- ---------- -----AGGC- GAT--GGA-T AACAGG---- --------TT GATATT-CCT GTACCACCTA TAATCG---- ----------
Bartonella.bacil ---------- ---------- -----AGTC- GAT--GGG-A ACCACG---- --------TT AATATT-CGT GGACCTGT-- GGGAA----- ----------
Rhodopseud.palus ---------- ---------- -----AGTC- GAT--GGG-A ATCACG---- --------TG AATATT-CGT GAGCCAGT-- -GGATG---- ----------
Rickettsia.ricke ---------- ---------- -----AGTC- GAT--GGG-A ATCAGG---- --------TT AATATT-CCT GAACCTGA-- AGGAT----- ----------
Bordetella.bronc ---------- ---------- -----AGCT- GAT--GGG-A AGCTGG---- --------TT AATATT-CCA GCACCGTCGT ACAGT----- ----------
Escherichi.coli ---------- ---------- -----AGTC- GAT--GGG-A AACAGG---- --------TT AATATT-CCT GTACTTGGTG TTACT----- ----------
Haemophilu.influ ---------- ---------- -----AGTC- GAT--GGG-A AACAGG---- --------TT AATATT-CCT GTACTTGGTA AAGCT----- ----------
Thermus.therm ---------- ---------- -----AGCC- GAA--GGG-C AGCCGG---- --------TT AATATT-CCG GCCCTTCCCG CAGGT----- ----------
Thermotoga.marit ---------- ---------- -----AGCC- GAA--GGG-A AGCCGG---- --------TT AATATT-CCG GCGCCACCTG CGGTC----- ----------
Zea.mays.CP ---------- ---------- -----AGTC- GAT--GGA-C AACAGG---- --------TC AATATT-CCT GTACTACCCC TTGTT----- ----------
nChlamydomo.reinh.CP ---------- ---------- -----CGTC- GAT--GGA-A AACAGG---- --------TT AATATT-CCT GTACGAGTTA AATTA----- ----------
Euglena.graci.CP ---------- ---------- -----AATT- GAT--GGA-T GACAGG---- --------TT AATATT-CCT GTACCGAATG CTCACT---- ----------
Desulfuroc.mobil ---------- ---------- ---CCCGGG- GAAT-GGG-A AACGGG---- --------TT AATATT-CCC GTGCCACGGG GGTAGG---- ---TGCG---
Sulfolobus.acido ---------- ---------- ---CCTACC- GAAA-GGG-A AAGGGG---- --------TT AACATT-CCC CTGCCTCCCG GGTAGG---- ---TGCG---
Thermofilu.pende ---------- ---------- ---GCCGCC- GAAA-GGG-A AAGGGG---- --------TT AATATT-CCC CTGCCGTGGG GTACGCTT-- ---TGCG---
Thermoprot.tenax ---------- ---------- ---CCCGCC- GAAA-GGG-A AACGGG---- --------TT AATATT-CCC GTGCCGCGGG GGTAGGTTC- ---TGCG---
Halobacter.halob ---------- ---------- ---CGGGTC- AAAA-GGG-A AACTGG---- --------TT AATATT-CCA GTGCCACCGT ACATTG---- ----------
Halobacter.maris ---------- ---------- ---TATGAC- GAAATGGG-A AACGGG---- --------TT AATATT-CCC GTGCCACTAT GCAGTG---- ----------
Halococcus.morrh ---------- ---------- ---TAAGAC- GAATCGGG-A AACTGG---- --------TT AATATT-CCA GTGCCCGCGT GCAAT----- ----------
Natronobac.magad ---------- ---------- ---GCAGAC- AACA-GGG-A AATAGG---- --------TT AATATT-CCT ATGCCGGTAT GCAATA---- ----------
Methanococ.vanni ---------- ---------- ---TGAGAG- GAAA-GGG-A AACAGG---- --------TT AATATT-CCT GTGCCATCTA GATACGC--- ----GTG---
Methanococ.janna ---------- ---------- ---GGGGGG- GAAA-GGG-A AGCGGG---- --------TT AATATT-CCC GCGCCACCGG GGTACGT--- ----GCG---
Xenopus.laevi ---------- CCGTCGCCCT CGGCCGATC- GAAA-GGG-A GTCGGG---- --------TT CAGATC-CCC GAACCCGGA- GTGGCGGAGA --CGGGCGCC
Homo.sapie ---------- CCGTTGCCCT CGGCCGATC- GAAA-GGG-A GTCGGG---- --------TT CAGATC-CCC GAATCCGGA- GTGGCGGAGA --TGGGCGCC
Candida.albic ---------- ----TC-AGG CCAGCCATC- GAAA-GGG-A ATCCGG---- --------TT AAAATT-CCG GAACTTGGAT ATGGATTC-- --TTCACG--
Saccharomy.cerev ---------- ---ATGCAGG CCA-CCATC- GAAA-GGG-A ATCCGG---- ---------T AAGATT-CCG GAACTTGGAT ATGGATTC-- --TTCACG--
Schizosacc.pombe ---------- ----TTCGTG CCTCCTATC- GAAA-GGG-A ATCCGG---- --------TT AATATT-CCG GAACCAGAAG GTGGAATC-- --AACACG--
Oryza.sativ ---------- -------CGC G--TGCCCC- GAAA-GGG-A ATCGGG---- --------TT AAGATTTCCC GAGCCGGGAC GTGGCGG--- --TTGACG--
Arabidopsi.thali ---------- --------GC G--AACTTC- GAAA-GGG-G ATCCGG---- --------TT AAAATT-CCG GAACCGGGAC GTGGCGG--- --TTGACG--
Fragaria.anana ---------- -------CGC G--AACTTC- GAAA-GGG-A ATCGGG---- --------TT AAAATT-CCT GAACCGGGAC GTGGTGG--- --TTGTCG--
Chlorella.ellip ---------- ------GCAC CG-CCCATC- GAAA-GGG-A AAAGGG---- --------TT AAGATT-CCC TTACCTGGAC AAGGCGG--C --TGACG---
nEuglena.graci ---------- --AGGAATGG CAAACAGGC- AAG--TGCGA GCAAGA---- --------TT CTACTG-TCA TGGGCTAGAG GTCCCTT--- --CGGGTCGG
Entamoeba.histo ---------- --GTCAATAT A---AGGATT GAAA-GGG-A ATAAGA---- --------TT AATAGT-TCT TAATCAAGAG AATTAATGA- --TTAAATCT
nTrypanosom.bruce GGGTTTGTGT GTTTTACCGG C-TTATCTG- AAAA-GGG-G CAACAG---- ---------- -AGAAC-CTG GGATGATATT CCAAAAAGAA --ATTGCATG
Giardia.intes ---------- --------CC C--GCCCGTC GAAC-GGG-G AGCCGG---- --------CG GAGACT-CCG GCAG-GCGC- GGCCCC---- ----CGCGGA
****************************************************
4401
Mycobacter.lepra ---------- ---------T GAATCAGCGG TACTCACCAC CCAAAACCGG ATCGACCATA TCCCCTTCG- GGGGCTATGG AGGTTCGGGG CTGCGT----
Streptomyc.grise ---------- ---------T GAAT-----C AGGCGATGCT AAGTCCGTGA AGCCGGCCCG ATCTCTTCG- GAGTTGAGGG TAGT--GGTG GAGCCG----
Bacillus.subti ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Lactobacil.delbr ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Leuconosto.mesen ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Staphyloco.aureu ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Bartonella.bacil ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Rhodopseud.palus ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Rickettsia.ricke ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Bordetella.bronc ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Escherichi.coli ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Haemophilu.influ ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Thermus.therm ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Thermotoga.marit ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Zea.mays.CP ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
nChlamydomo.reinh.CP ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Euglena.graci.CP ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Desulfuroc.mobil ---------- ---------- ---------- ---------- ---------- ---------- -----GCAA- ---------- ---------- ----------
Sulfolobus.acido ---------- ---------- ---------- ---------- ---------- ---------- -----GTAA- ---------- ---------- ----------
Thermofilu.pende ---------- ---------- ---------- ---------- ---------- ---------- -----GCAA- ---------- ---------- ----------
Thermoprot.tenax ---------- ---------- ---------- ---------- ---------- ---------- -----GCAA- ---------- ---------- ----------
Halobacter.halob ---------- ---------- ---------- ---------- ---------- ---------- -----AAA-- ---------- ---------- ----------
Halobacter.maris ---------- ---------- ---------- ---------- ---------- ---------- -----AAA-- ---------- ---------- ----------
Halococcus.morrh ---------- ---------- ---------- ---------- ---------- ---------- -----CAT-- ---------- ---------- ----------
Natronobac.magad ---------- ---------- ---------- ---------- ---------- ---------- -----AAA-- ---------- ---------- ----------
Methanococ.vanni ---------- ---------- ---------- ---------- ---------- ---------- -----GCAA- ---------- ---------- ----------
Methanococ.janna ---------- ---------- ---------- ---------- ---------- ---------- -----GCAA- ---------- ---------- ----------
Xenopus.laevi C-GCGGCCCC CCCCGACGCC ---------- ---------- ---------- ---------- -----TCGC- ---------- ---------- ----GGCGGC
Homo.sapie --GCGAGG-- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Candida.albic ---------- ---------- ---------- ---------- ---------- ---------- -----GCAA- ---------- ---------- ----------
Saccharomy.cerev ---------- ---------- ---------- ---------- ---------- ---------- -----GTAA- ---------- ---------- ----------
Schizosacc.pombe ---------- ---------- ---------- ---------- ---------- ---------- -----GCAA- ---------- ---------- ----------
Oryza.sativ ---------- ---------- ---------- ---------- ---------- ---------- -----GCGA- ---------- ---------- ----------
Arabidopsi.thali ---------- ---------- ---------- ---------- ---------- ---------- -----GCAA- ---------- ---------- ----------
Fragaria.anana ---------- ---------- ---------- ---------- ---------- ---------- -----GCAA- ---------- ---------- ----------
Chlorella.ellip ---------- ---------- ---------- ---------- ---------- ---------- -----GTAA- ---------- ---------- ----------
nEuglena.graci ---------- ---------- ---------- ---------- ---------- ---------- -----TGGC- ---------- ---------- ----------
Entamoeba.histo TAGAAATAAG ATTAAATCG- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
nTrypanosom.bruce TGGGA----- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Giardia.intes GACGCCC--- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
4501
Mycobacter.lepra ---------- GGGAACTTCG TTGGTAGTAG TCAA-GCGAT -GGGGTGAC- GCAGGAAGGT A-GCCGT--- --ACCAGT-- --CAGTGGTA AT---ACTGG
Streptomyc.grise ---------- ATGAACCAGA CTTGTAGTAG GTAA-GCGAT -GGGGTGAC- GCAGGAAGGT A-GTCCA--- --GCCCGGG- --CGGTGGTT GT--CCCGGG
Bacillus.subti ---------- ---------- --------AT TTGA-GCAAT -GGGGGGAC- GCAGGAGGAT A-GGGTAA-- --GCGCGG-- --TATTGGAT AT---CCGCG
Lactobacil.delbr ---------- ---------- --------TT ATGA-GCGAT -GGAGGGAC- GCAGGAGGCT A-GCATGC-- --GCGTGG-- --TGCTGGAT A----CCACG
Leuconosto.mesen ---------- ---------- -------GTT ATTA-CCGAT -GGAGGGAC- GCAGGAGGCT A-CCAGAT-- --GCGCAC-- --TGATGGAT AT---GTGCG
Staphyloco.aureu ---------- ---------- --------TT TTAA-TCGAT -GGGGGGAC- GCAGTAGGAT A-GGCGAA-- --GCGTGC-- --GATTGGAT T----GCACG
Bartonella.bacil ---------- ---------- ---------- ---------- ----GTGAC- GGATTAGGAA T-ATTGTA-- ---AGGTC-- --TTATTGGA TT---GATCT
Rhodopseud.palus ---------- ---------- ---------- ---------- ----GTGAC- GAATCCCTTA T-GTTGTT-- ---CGACC-- --TTACTGGA TT---GGTCG
Rickettsia.ricke ---------- ---------- ---------- ---------- ----GTGAC- GAAAATAGTA A-ATTGTA-- ---CAGTC-- --TTATTGGA TT---GATTG
Bordetella.bronc ---------- ---------- ---------- -----GCGAT -GGGGGGAC- GGAT-CGCGG AAGGTCA--- --TCAGGG-- --TGTTGGAC GT---CCCTG
Escherichi.coli ---------- ---------- ---------- -----GCGAA -GGGGGGAC- GGAGAAGGCT A-TGTTG--- --GCCGGG-- --CGACGGTT GT---CCCGG
Haemophilu.influ ---------- ---------- ---------- -----GCGAT -GTGGGGAC- GGAGTAGGTT A-GGTTA--- --TCGCAC-- --TGTTGGAT AT---GTGCG
Thermus.therm ---------- ---------- ---------- -----GCGAT -GGGGGGAC- GCTCTAGGCT A-GGGGGA-- --CCGGAG-- --CCATGGAC GA---GCCCG
Thermotoga.marit ---------- ---------- ---------G ATGG-TACGA -GGGGTGAC- GCAGGAGGGT A-GGCGC--- --CGGGGGC- --AAGTGGCA TG---CCCCT
Zea.mays.CP ---------- ---------- ---------- ------GGTA CGGAGGGAC- GGAGGAGGCT A-GGTTA--- --GCCGAA-- --AGATGGTT -----ATAGG
nChlamydomo.reinh.CP ---------- ---------- ---------- ------TGAT CTGAGGGAC- GAAGGAGGCT AAGCTAG--- --AACTGT-- --TTTTGGAT ----TGCAGT
Euglena.graci.CP ---------- ---------- ---------- ------TGTA AGGAGTGAC- GAAAAAGGCT A-GATCG--- --GCCACG-- --TGATGGTT -----TGTGG
Desulfuroc.mobil ---------- ---------- ---------C GCAA-GCCCC GCCTCTGAC- GCCTCTGGAT A-GGCGGA-- --CTGGGGGC ACCCGTATGG GTGCGACCCA
Sulfolobus.acido ---------- ---------- ---------C GCAA-GCCAG ACTCCTGAC- GGATTGGGGT A-GGGAGA-- --GTAGGAC- ----CACC-- ----GTCCTA
Thermofilu.pende ---------- ---------- ---------C GCGA-GCCCC GCTCCTGAC- GCCTCGGGAT A-GGGGGA-- --GTGGGAC- ----TGCC-- ----GTCCCA
Thermoprot.tenax ---------- ---------- ---------C GCAG-GCCCC GTCCCCGAC- GCCTCGGGAT A-GGGCGG-- --GCGGGAC- ----CACC-- ----GTCCCG
Halobacter.halob ---------- ---------- ---------- ---------- ---GTCGAC- GCCTCGGAGC A-GCTTGA-- --GCCGGGC- ----ATTC-- ----GCCCGG
Halobacter.maris ---------- ---------- ---------- ---------- ---GTTGAC- GCCCTGGGGT C-GATCAC-- --GCTGGGC- ----ATTC-- ----GCCCAG
Halococcus.morrh ---------- ---------- ---------- ---------- ---GCCGAC- GCCTCGGGGT C-GACCGA-- --GCCGGGC- ----ACTC-- ----GCCCGG
Natronobac.magad ---------- ---------- ---------- ---------- ---GTTGAC- GCTTTGGGGC C-ACCCAG-- --GCTGGGC- ----CTTC-- ----GCCCAG
Methanococ.vanni ---------- ---------- ---------C ACAA-GGTTA GTTTCCAAC- GCTTCTGGGT A-GGCTGA-- --GTGTTCT- ----TGTC-- ----TGGACA
Methanococ.janna ---------- ---------- ---------C GCAA-GGCCA GCTCCTGAC- GCTTCGGGGT A-GGCCGA-- --CCACCCC- ----CGTC-- ----GGGGTG
Xenopus.laevi GGGGGGGCGG GGGCGTCCAG TGC-GGCGAC GCGACC-GAT CCCGGAGAA- GCCGGCGGGA G-CCCCG--- --GGGAGAG- ----TTCT-- ----CTTTTC
Homo.sapie ---------- ---CGTCCAG TGC-GGTAAC GCGACC-GAT CCCGGAGAA- GCCGGCGGGA G-CCCCG--- --GGGAGAG- ----TTCT-- ----CTTTTC
Candida.albic ---------- ---------- ---------C GTAACT-GAA TGTGGAGAC- GTCGGCGTGA G-CCCTG--- --GGAGGAG- ----TTAT-- ----CTTTTC
Saccharomy.cerev ---------- ---------- ---------C GTAACT-GAA TGTGGAGAC- GTCGGCGCGA G-CCCTG--- --GGAGGAG- ----TTAT-- ----CTTTTC
Schizosacc.pombe ---------- ---------- ---------C GTAAAT-GAA GTTGGAGAC- GTCGGCGGGA G-CCCTG--- --GGAAGAG- ----TTCT-- ----CTTTTC
Oryza.sativ ---------- ---------- ---------C GTTAGG-AAG TCCGGAGAC- GCCGGCGGGG G-CCTCG--- --GGAAGAG- ----TTAT-- ----CTTTTC
Arabidopsi.thali ---------- ---------- ---------C GTTAGG-GAG TCCGGAGAC- GTCGGCGGGG G-CCTCG--- --GGAAGAG- ----TTAT-- ----CTTTTC
Fragaria.anana ---------- ---------- ---------C GTTAGG-GAG TCCGGAGAC- GTCGGCGGGG G-GCTCG--- --GGAAGAG- ----TTAT-- ----CTTTTC
Chlorella.ellip ---------- ---------- ---------C GTAAGC-GAG TCCGGAGAC- GCCGGCGGTG G-CCCTG--- --GGAAGAG- ----TTCT-- ----CTTTTC
nEuglena.graci ---------- --------GA CACCCCCAAG GCAGCC-CCT CCAGGCATC- GAACCAGTGA A-TCCCCT-- --GTGGAGTT ---CTCGT-- -TTCCTCCTG
Entamoeba.histo ---------- -----AATAA AATGGTAACA TATCAT-GAA CTTTAAAAT- GGAG-TGTGA AAATCTAC-- --GGAAGAG- ----TTCT-- ----CTTTTC
nTrypanosom.bruce ---------- ------ACTG TGGAAATGCG AAACAC-TTG CCAGGTGAC- CCAT-CCATC C-TCCCAC-- ---GGTGAG- ----CTTTCT T---TTCACC
Giardia.intes ---------- ---------- ---GCCCCCC GGCGACGCGC ACGGG-GACC GCGG-CGGGC G-GCGC---- --CCCGGCCC ----GCGA-- ----ACGC-C
4601
Mycobacter.lepra A----GCAAG CCCGT----- --AGG-GA-- --GAGCGATA ---GG----- ---CAAAT-- ---------- ---------- ---------- ----------
Streptomyc.grise -----GTAAG GGTGT----- --AGG-AC-- --GCACGGTA ---GG----- ---CAAAT-- ---------- ---------- ---------- ----------
Bacillus.subti T----CCAAG CAGTT----- --AGG-CT-- --GGGAAATA ---GG----- ---CAAAT-- ---------- ---------- ---------- ----------
Lactobacil.delbr T----TCAAG CGTCA----- --AGT-CT-- --GAGAGCGA ---GT----- ---CAAAT-- ---------- ---------- ---------- ----------
Leuconosto.mesen T----GCAAG CAGTA----- --AGT-CT-- --TGAAAAGA ---GT----- ---GAAAT-- ---------- ---------- ---------- ----------
Staphyloco.aureu T----CTAAG CAGTA----- --AGG-CT-- --GAGTATTA ---GG----- ---CAAAT-- ---------- ---------- ---------- ----------
Bartonella.bacil ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Rhodopseud.palus ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Rickettsia.ricke ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Bordetella.bronc T----TGCTG CATTG----- --AAG-AT-- --GGCGCTTA ---GG----- ---CAAAT-- ---------- ---------- ---------- ----------
Escherichi.coli T----TTAAG CGTGT----- --AGG-CT-- -GGTTTTCCA ---GG----- ---CAAAT-- ---------- ---------- ---------- ----------
Haemophilu.influ T----TTAAG TTGGT----- --AGG-TG-- -GGAAGTTTA ---GG----- ---CAAAT-- ---------- ---------- ---------- ----------
Thermus.therm G----CCAGA AGCGC----- --AGG-G--- -TGGGAGGTA ---GG----- ---CAAAT-- ---------- ---------- ---------- ----------
Thermotoga.marit -----CCAAG CGGTTA---- --GGG-CGAT GACGGGCGTA ---GG----- ---TAAAT-- ---------- ---------- ---------- ----------
Zea.mays.CP T----TTAAG GACACA---- --AGG-TGAC CCTG------ CTTTTTCAGG GTAAG--AAG GGGTAGAGAA AATG-CCTCG AGCCGAGGTC CGAGTACCAA
nChlamydomo.reinh.CP G-----GAAG CGTTTA---- ---GA-C--- ---------- ---------- ---------- --GTTGAGAG ATAG-AAAAA AAGCTAT-CT T---------
Euglena.graci.CP T----TTAAG GGTTCA---- --AGA-G--- ---------- ---------- ---------- --GTATCAAA TATT-AAAAA AAATATTTTG TCTT------
Desulfuroc.mobil G----CTAAC CGGTGA---- --AGG--CCC CGGAGT---- --ACC----- ---GTCAT-- ---------- ---------- ---------- ----------
Sulfolobus.acido C----CCAAG CACTCA---- --AGC--CCT TGGAGA---- --GCC----- ---GTAAC-- ---------- ---------- ---------- ----------
Thermofilu.pende T----CCAAG CGCTGA---- --AGC--CCG CTGAGT---- --GCC----- ---GTCAT-- ---------- ---------- ---------- ----------
Thermoprot.tenax T----TTAAC CGCTGA---- --AGG--CCG GGGAGT---- --GCC----- ---GTAAT-- ---------- ---------- ---------- ----------
Halobacter.halob T----CGAAC CGTCGA---- --AGT--TCG TGGAA----- --GCC----- ---GTAAT-- ---------- ---------- ---------- ----------
Halobacter.maris T----CGAAC CGTCCA---- --ACT--CCG TGGAA----- --GCC----- ---GTAAT-- ---------- ---------- ---------- ----------
Halococcus.morrh T----CGAAT CACCAA---- -AACT--TCG TGGAA----- --GCC----- ---GTAAC-- ---------- ---------- ---------- ----------
Natronobac.magad T----TGAAC AGTCGA---- --AGA--GCG TGGAA----- --GCC----- ---GTAAT-- ---------- ---------- ---------- ----------
Methanococ.vanni T----TCAAG CTTATA---- --AGT--CCG GGGAGA---- --GTT----- ---GTAAT-- ---------- ---------- ---------- ----------
Methanococ.janna G----CCAAG CGCATA---- --AGC--CCG GGGAGT---- --GCC----- ---GTAAT-- ---------- ---------- ---------- ----------
Xenopus.laevi TTTGT--GAA GGGCAGGGC- -----CGCCC TGGAAT---- --GGG----- ---TTCGC-- ---------- ---------- ---------- ----------
Homo.sapie TTTGT--GAA GGGCAGGGC- ------GCCC TGGAAT---- --GGG----- ---TTCGC-- ---------- ---------- ---------- ----------
Candida.albic TTCTT--AAC AGCTTATC-- ------ACCC TGGAAT---- --TGG----- ---TTTAT-- ---------- ---------- ---------- ----------
Saccharomy.cerev TTCTT--AAC AGCTTATC-- ------ACCC CGGAAT---- --TGG----- ---TTTAT-- ---------- ---------- ---------- ----------
Schizosacc.pombe TTTTT--AAC AAACCATTG- --AACTACCC TGAAAT---- --CGG----- ---TTTAT-- ---------- ---------- ---------- ----------
Oryza.sativ TGCTT--AAC GGCCCGCCA- ------ACCC TGGAAA---- --CGG----- ---TTCAG-- ---------- ---------- ---------- ----------
Arabidopsi.thali TGTTT--AAC AGCCTGCCC- ------ACCC TGGAAA---- --CGG----- ---CTCAG-- ---------- ---------- ---------- ----------
Fragaria.anana TGTTT--AAC AGCCTGCCC- ------ACCC TGGAAA---- --CGG----- ---CTCAG-- ---------- ---------- ---------- ----------
Chlorella.ellip TTTTT--AAC AGCTCGAAG- ------GCCC TGGAAT---- --CGG----- ---ATCAT-- ---------- ---------- ---------- ----------
nEuglena.graci ATGCA--GAC TCACGCGGGC -------TAT CGATCGG--- --CAT----- ---GACAG-- ---------- ---------- ---------- ----------
Entamoeba.histo TTCTT--AAC AAAAGTAAA- -----TTCCA CTGAAA---- --TGA----- ---ATCAA-- ---------- ---------- ---------- ----------
nTrypanosom.bruce ATAA---TCC ACATCTCCGG CCTTGCTGGG GCTTGGGCCT CTCGACTTCT CG-------- ---------- ---------- ---------- ----------
Giardia.intes ---------- ---CCGCAG- ------CCCC ---------- ---------- ---CGGAC-- ---------- ---------- ---------- ----------
4701
Mycobacter.lepra ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Streptomyc.grise ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Bacillus.subti ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Lactobacil.delbr ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Leuconosto.mesen ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Staphyloco.aureu ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Bartonella.bacil ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Rhodopseud.palus ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Rickettsia.ricke ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Bordetella.bronc ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Escherichi.coli ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Haemophilu.influ ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Thermus.therm ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Thermotoga.marit ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Zea.mays.CP GCGCTGCAGC GCGAAA---- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
nChlamydomo.reinh.CP ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Euglena.graci.CP ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Desulfuroc.mobil ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Sulfolobus.acido ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Thermofilu.pende ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Thermoprot.tenax ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Halobacter.halob ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Halobacter.maris ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Halococcus.morrh ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Natronobac.magad ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Methanococ.vanni ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Methanococ.janna ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Xenopus.laevi ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Homo.sapie ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Candida.albic ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Saccharomy.cerev ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Schizosacc.pombe ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Oryza.sativ ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Arabidopsi.thali ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Fragaria.anana ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Chlorella.ellip ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
nEuglena.graci ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Entamoeba.histo ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
nTrypanosom.bruce ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Giardia.intes ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
4801
Mycobacter.lepra ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Streptomyc.grise ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Bacillus.subti ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Lactobacil.delbr ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Leuconosto.mesen ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Staphyloco.aureu ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Bartonella.bacil ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Rhodopseud.palus ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Rickettsia.ricke ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Bordetella.bronc ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Escherichi.coli ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Haemophilu.influ ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Thermus.therm ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Thermotoga.marit ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Zea.mays.CP ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
nChlamydomo.reinh.CP ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Euglena.graci.CP ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Desulfuroc.mobil ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Sulfolobus.acido ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Thermofilu.pende ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Thermoprot.tenax ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Halobacter.halob ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Halobacter.maris ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Halococcus.morrh ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Natronobac.magad ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Methanococ.vanni ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Methanococ.janna ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Xenopus.laevi ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Homo.sapie ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Candida.albic ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Saccharomy.cerev ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Schizosacc.pombe ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Oryza.sativ ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Arabidopsi.thali ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Fragaria.anana ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Chlorella.ellip ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
nEuglena.graci ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Entamoeba.histo ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
nTrypanosom.bruce ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Giardia.intes ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
4901
Mycobacter.lepra ---------- ---------- ---------- -----CC--- --GTCGTTCG -TGAATCCTG AG-AGGT--- GATGCATA-- ---------- ----------
Streptomyc.grise ---------- ---------- ---------- -----CC--- --GTCGTGCA TATAAGTCTG AG-ACCT--- GATGCCGA-- ---------- ----------
Bacillus.subti ---------- ---------- ---------- -----CC--- --GTTTCCCA --TAAGGCTG AG-CTGT--- GATGGCGA-- ---------- ----------
Lactobacil.delbr ---------- ---------- ---------- -----GC--- -TTGCTCTCA --TAAGGACA AG-GCGT--- GATGAGGA-- ---------- ----------
Leuconosto.mesen ---------- ---------- ---------- -----GC--- --TTTTTTCT -ATAAGGACA AG-CTGT--- GATGCGGA-- ---------- ----------
Staphyloco.aureu ---------- ---------- ---------- -----CC--- --GGTACTCG -TTAAGGCTG AG-CTGT--- GATGGGGA-- ---------- ----------
Bartonella.bacil ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Rhodopseud.palus ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Rickettsia.ricke ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Bordetella.bronc ---------- ---------- ---------- -----CC--- ---GGGCGCG --AGAATCAA GG-GTGT--- -GGCACGA-- ---------- ----------
Escherichi.coli ---------- ---------- ---------- -----CC--- -GGAAAATC- ---AAGGCTG AG-GCGT--- GATGACGA-- ---------- ----------
Haemophilu.influ ---------- ---------- ---------- -----CC--- -GGACTTCCT T--AACACAG AG-AGAT--- GATGACGA-- ---------- ----------
Thermus.therm ---------- ---------- ---------- -----CC--- -GCCTCCCA- ---ACAAGCT CT-GCGT--- GGTGGGGA-- ---------- ----------
Thermotoga.marit ---------- ---------- ---------- -----CC--- -GCGCCCC-- ---GAGCCTG AG-CCGT--- GATGGGGA-- ---------- ----------
Zea.mays.CP ---------- ---------- -------GTA TGAGCCCCGT GGACTAGCCA TTGCTTCTCC ACGAGGC--T CATACCAG-- ---------- ----------
nChlamydomo.reinh.CP ---------- ---------- ---------- ---------- ---------- ----GAGTGG AGACGTG--- ATCCCTAT-- ---------- ----------
Euglena.graci.CP ---------- ---------- ---------- ---------- ---------- ---------A AGGCCTG--A ATAGTATA-- ---------- ----------
Desulfuroc.mobil ---------- ---------- ---------- -----GGT-- --GAGAA-GG G----GCCGA A-GCCGG--- GAATG----- ---------- ----------
Sulfolobus.acido ---------- ---------- ---------- -----GGT-- --GAGAA-GA G----GGCGA AG-GTGT--- GATGG----- ---------- ----------
Thermofilu.pende ---------- ---------- ---------- -----GGC-- --GAGAA-GC G----GGTGA AG-GCGC--- GATGG----- ---------- ----------
Thermoprot.tenax ---------- ---------- ---------- -----GGC-- --GAGAA-CC G----GCCGA AG-GCGG--- GAATA----- ---------- ----------
Halobacter.halob ---------- ---------- ---------- -----GGC-- --AGGAA-GC G----AACGA ACGTCGG--- AACAG----- ---------- ----------
Halobacter.maris ---------- ---------- ---------- -----GGC-- --AGGAA-GC G----GACGA ACGGCGG--- CATAG----- ---------- ----------
Halococcus.morrh ---------- ---------- ---------- -----GGC-- --ACGAA-GC G----GGCGA ACGGTGA--- GATAG----- ---------- ----------
Natronobac.magad ---------- ---------- ---------- -----GGC-- --ACGAA-GC G----ATCGA ATGGCTG--- GATAA----- ---------- ----------
Methanococ.vanni ---------- ---------- ---------- -----AAC-- --GAGAA-CC G----GATGA AA-GAGT--- GATGA----- ---------- ----------
Methanococ.janna ---------- ---------- ---------- -----GGC-- --GAGAA-CC G----GGCAA AA-GCGT--- GATGG----- ---------- ----------
Xenopus.laevi ---------- ---------- ---------- -----CCC-- --GAGAG-AG GG-GCCCGC- --GCCTT--- GGAAA----- ---------- ----------
Homo.sapie ---------- ---------- ---------- -----CCC-- --GAGAG-AG GG-GCCCGT- --GCCTT--- GGAAA----- ---------- ----------
Candida.albic ---------- ---------- ---------- -----CCG-- --GAGAT-GG GG-TCTTAG- --GGCTG--- GAAGA----- ---------- ----------
Saccharomy.cerev ---------- ---------- ---------- -----CCG-- --GAGAT-GG GG-TCTTAT- --GGCTG--- GAAGA----- ---------- ----------
Schizosacc.pombe ---------- ---------- ---------- -----CCG-- --GAGCT-AG GG-TATGGT- --GTTTG--- GAAGA----- ---------- ----------
Oryza.sativ ---------- ---------- ---------- -----CCG-- --GAGGT-AG GG-TCCAGC- --GGCCG--- GAAGA----- ---------- ----------
Arabidopsi.thali ---------- ---------- ---------- -----CCG-- --GAGGT-AG GG-TCCAGC- --GGCTG--- GAAGA----- ---------- ----------
Fragaria.anana ---------- ---------- ---------- -----CCG-- --GAGGT-AG GG-TCCAGC- --GGCTG--- GAAGA----- ---------- ----------
Chlorella.ellip ---------- ---------- ---------- -----CCG-- --GAGAT-AG GG-CTCAGT- --GGCTG--- GTAAA----- ---------- ----------
nEuglena.graci ---------- ---------- ---------- -----ATG-- --GTGGTGTA TG-CCCTT-- CGCTCAG--- -CAAG----- ---------- ----------
Entamoeba.histo ---------- ---------- ---------- -----TCA-- --GAGAAGTG GAATTTATT- GGCTTTG--- TAAGA----- ---------- ----------
nTrypanosom.bruce ---------- ---------- ---------- ----CGTTAC TCGGAGCGGG GG-CTCAAG- --ATTGA--- AAAAT----- ---------- ----------
Giardia.intes ---------- ---------- ---------- -----GCC-- --TTGCG--- ---------- --------CG GAGAG----- ---------- ----------
5001
Mycobacter.lepra ---------- ---------- ---------- -------GCC G--------A TTG------- ---------- ---------- ---AGGC--- --GAAT----
Streptomyc.grise ---------- ---------- ---------- -------GCC G--------A TTG------- ---------- ---------- ---TGGT--- --GAAG----
Bacillus.subti ---------- ---------- ---------- -------GCG AA-------A TATA------ ---------- ---------- --GTAGC--- --GAAG----
Lactobacil.delbr ---------- ---------- ---------- -------GCG AA-------A TTAAA----- ---------- ---------- --GTAGC--- --GAAG----
Leuconosto.mesen ---------- ---------- ---------- -------TCG AA-------A TAAA------ ---------- ---------- --GTAGA--- --GAAG----
Staphyloco.aureu ---------- ---------- ---------- -------GAA GACA------ TTG------- ---------- ---------- TGTCTTC--- --GA-G----
Bartonella.bacil ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------T
Rhodopseud.palus ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------G
Rickettsia.ricke ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------T
Bordetella.bronc ---------- ---------- ---------- -------GCG AG-------C AAG------- ---------- ---------- --TCTCG--- -CGAAG----
Escherichi.coli ---------- ---------- ---------- -------GGC AC-------T ACG------- ---------- ---------- --GTGCT--- --GAAG----
Haemophilu.influ ---------- ---------- ---------- -------GGC TC-------T ACG------- ---------- ---------- --GAGCT--- --GAAG----
Thermus.therm ---------- ---------- ---------- -------AGC CC-------G TAC------- ---------- ---------- --GGGTG--- -ACAAC----
Thermotoga.marit ---------- ---------- ---------- -------GGT CCC------T TCG------- ---------- ---------- -GGGACC--- --AACG----
Zea.mays.CP ---------- ---------- ---------- -------GCG C--------T ACG------- ---------- ---------- ---GCGC--- --GAAGTATG
nChlamydomo.reinh.CP ---------- ---------- ---------- ------TTGA TGG------- ----TTCG-- ---------- ---------- -CCGTCGA-- --GTAG----
Euglena.graci.CP ---------- ---------- ---------- -------AAT AC-------T ACG------- ---------- ---------- --GTATTG-- --AAAG----
Desulfuroc.mobil ---------- ---------- ---------- -------GGG CTCC-----C TTG------- ---------- ---------- GGAGCCT--- ---------T
Sulfolobus.acido ---------- ---------- ---------- -------GCC TTCC-----G TTA------- ---------- ---------- GGAGGGT--- ---------T
Thermofilu.pende ---------- ---------- ---------- -------GCC CGCC-----G TTA------- ---------- ---------- GGCGGGT--- ---------T
Thermoprot.tenax ---------- ---------- ---------- -------GCC GGGG-----G TTT------- ---------- ---------- CCTCGGT--- ---------C
Halobacter.halob ---------- ---------- ---------- -------G-- ---------G AAA------- ---------- ---------- ------C--- ---------T
Halobacter.maris ---------- ---------- ---------- -------G-- ---------G AAA------- ---------- ---------- ------C--- ---------G
Halococcus.morrh ---------- ---------- ---------- -------A-- ---------G AAA------- ---------- ---------- ------T--- ---------T
Natronobac.magad ---------- ---------- ---------- -------C-- ---------G CAA------- ---------- ---------- ------G--- ---------C
Methanococ.vanni ---------- ---------- ---------- -------GCT CTCC-----G TTA------- ---------- ---------- GGAGAGT--- ---------T
Methanococ.janna ---------- ---------- ---------- -------GCC CTCC-----G TTA------- ---------- ---------- GGAGGGT--- ---------T
Xenopus.laevi ---------- ---------- ---------- ------GCGT CGC----GGT -TCCG----- ---------- ---------- GCGGCGT--- -------CCG
Homo.sapie ---------- ---------- ---------- ------GCGT CGC----GGT -TCCG----- ---------- ---------- GCGGCGT--- -------CCG
Candida.albic ---------- ---------- ---------- ------GCGC GGT----AAT -TTT------ ---------- ---------- GCCGCGT--- -------CCG
Saccharomy.cerev ---------- ---------- ---------- ------GGCC AGC----ACC -TTT------ ---------- ---------- GCTGGCT--- -------CCG
Schizosacc.pombe ---------- ---------- ---------- ------GTTC AGC----GCC -TCAT----- ---------- ---------- GCTGAAT--- -------CCG
Oryza.sativ ---------- ---------- ---------- ------GCAC CGC----ACG -TCGC----- ---------- ---------- GCGGTGT--- -------CCG
Arabidopsi.thali ---------- ---------- ---------- ------GCAC CGC----ACG -TCGC----- ---------- ---------- GTGGTGT--- -------CCG
Fragaria.anana ---------- ---------- ---------- ------GCAC CGC----ACG -TCGC----- ---------- ---------- GTGGTGT--- -------ACG
Chlorella.ellip ---------- ---------- ---------- ------GCAC CGC----ACG -TCTC----- ---------- ---------- GCGGTGT--- -------CCG
nEuglena.graci ---------- ---------- ---------- ------GCGG TGTG---GTC --TC------ ---------- ---------- CACACCG--- -ATGGCAAGT
Entamoeba.histo ---------- ---------- ---------- ------AATT CAA----CAT -ATGA----- ---------- ---------- TTGAATT--- -------GTG
nTrypanosom.bruce ---------- ---------- ---------- ------GCAG CTC----ACC -CTAC----- ---------- ---------- GTACTGT--- --CCTTTGTT
Giardia.intes ---------- ---------- ---------- ------GGGG GCC----CG- -GGG------ ---------- ---------- GCGGACC--- -------CCG
5101
Mycobacter.lepra TCGGT-AAGC CTCT-GCTGC C-AAGAAAAG -CCTC----- ---------- --------TA -GCGA----- ---------- -----GCATA CATGCGG---
Streptomyc.grise TGGAT-GATC CTAT-GCTGT C-GAGAAAAG -CCTC----- ---------- --------TA -GCGA----- ---------- -----GTTTC ATGGCGG---
Bacillus.subti TTCCT-GATT CCAC-ACTGC C-AAGAAAAG -CCTC----- ---------- --------TA -GCGA----- ---------- ------GGTG AGAGGTG---
Lactobacil.delbr GCTGC-GACG TCAC-ACTGC C-GAGAAAAG -CTTC----- ---------- --------TA -GCCA----- ---------- ------GAGA CGGTGCA---
Leuconosto.mesen TCTGA-GACG TCAC-ACTGC C-GAGAAAAG -CTTC----- ---------- --------TA -GGAA----- ---------- ------GTAT TACACTG---
Staphyloco.aureu TCGTT-GATT TCAC-ACTGC C-GAGAAAAG -CCTC----- ---------- --------TA -GATA----- ---------- ------GAAA ATAGGTG---
Bartonella.bacil GCAGT----A GAAT-AATCC C-AGGAAATA -GC------- ---------- ---------- ---------- ---------- -----TCCCA CATATAG---
Rhodopseud.palus GCCTC----G ACGG-GGTTC C-AGGAAATA -GCC------ ---------- ---------- ---------- ---------- ------TCCA CA-TCAG---
Rickettsia.ricke GCAGT----G AATA-TTTTC C-AGGAAATA -ACACC---- ---------- ---------- ---------- ---------- ------TTCA T-TATAG---
Bordetella.bronc TGATT-GGAA GT---GGTTC C-AAGAAAAG -CCTC----- ---------- --------TA AGCTTCA--- ---------- -------GCT GTACGAG---
Escherichi.coli CAACA-AATG CCCT-GCTTC C-AGGAAAAG -CCTC----- ---------- --------TA AGCATCA--- ---------- ------GGTA ACATCAA---
Haemophilu.influ TAACT-GATA CCAC-ACTTC C-AGGAAAAG -CCAC----- ---------- --------TA AGCGAAA--- ---------- ------GGCT TTACTAA---
Thermus.therm CCCCC-GAAG CCAG-GGAGC C-AAGAAAAG -CCTC----- ---------- --------TA AGCACAA--- ---------- -------CCT GCGGGAA---
Thermotoga.marit GCGCT-GACC CCAC-ACTGC C-GAGAAAAA -CCTC----- ---------- -------GCG TACCGCTTGA ---------- ------GACC GTAGGTG---
Zea.mays.CP TAACC-CATG CCAT-ACTCC C-AGGAAAAG -CTCG----- ---------- --------AA CGACCT---- ---------- ---TCAACAA AAGGGTA---
nChlamydomo.reinh.CP CTAGT-GATG TCAT-ACTTC C-AAGAAAAG -CTCA----- ---------- --------TA CATCT----- ---------- ---TTATAAT TTAATGA---
Euglena.graci.CP TGATT-GATG TCAT-GTTTC C-AAGAAAAA -CTTT----- ---------- --------TG TTTATG---- ---------- ---TATAGTG A-GCTCG---
Desulfuroc.mobil CCGCC-GATT CCA--GGGGC CCTTGAAAAG -GGGGCGGGG ---------- ---------A ACGAT----- ---------- ---------C CCCCGTG---
Sulfolobus.acido CTCCT-GATC CCT--AGTCC CCATGAAAAG -GGAGTCTGG ---------- ---------A ACGAT----- ---------- ---------C CCGGGAG---
Thermofilu.pende CCCCC-GACT CCT--GGGGC CCGTGAAAAG -GGAGCGGGG ---------- ---------A AGGA------ ---------- ---------G CCCCACG---
Thermoprot.tenax CGCCC-GACT CCT--GGGGC CCATGAAAAG -GGGACGGGG ---------- ---------A ACGAG----- ---------- ---------C CCTCGCG---
Halobacter.halob CAAGT-CAA- TCT--GGGGC CCGTGAAAAG -GC------- ---------- ---------- --GA------ ---------- ---------G TACGGTG---
Halobacter.maris TGATT-CA-- CCT--GGGGC CCATGAAAAG -AC------- ---------- ---------- --GA------ ---------- ---------G CATAGTG---
Halococcus.morrh CGGTC-CAA- CCT--GGGGC CCGTGAAAAG -GC------- ---------- ---------- ---------- ---------- ---------G CACGCGG---
Natronobac.magad TGGGT-CAA- CCC--AGAGC CCGTGAAAAG -AC------- ---------- ---------- --GA------ ---------- ---------G CATACTG---
Methanococ.vanni CGGCC-GATC TCT--GGAGC CCGTGAAAAG -GGAACTAGC ---------- ---------A AGGAT----- ---------- ---------T CTAGATG---
Methanococ.janna CGGCT-GAGC CCT--GGAGC CCGTGAAAAG -GGAGCTGGC ---------- ---------A AGGAT----- ---------- ---------C CCCGGTG---
Xenopus.laevi GTGAG--CTC TCGC-TGGC- CCTTGAAAA- TCCG-GGGGA GAGGGTGTAA AT-------- ---------- ---------- -------CTC GCGCCGG---
Homo.sapie GTGAG--CTC TCGC-TGGC- CCTTGAAAA- TCCG-GGGGA GAGGGTGTAA AT-------- ---------- ---------- -------CTC GCGCCGG---
Candida.albic GTGCG--CTT ACGA-CGGT- CCTTGAAAA- TCCA-CAGGA AGGAATAGTT ---------- ---------- ---------- -------TTC ATGCCAA---
Saccharomy.cerev GTGCG--CTT GTGA-CGGC- CCGTGAAAA- TCCA-CAGGA AGGAATAGTT ---------- ---------- ---------- -------TTC ATGCTAG---
Schizosacc.pombe GTGCG--CTC TCGA-CGGC- CCTTGAAAA- TCCA-ACGGA AGAATGGACC TTCGGGTCTT GTT------- ---------- -------TTC ACATCTG---
Oryza.sativ GTGCG--CCC CCGG-CGGC- CCTTGAAAA- TCCG-GAGGA CCGAGTACCG ---------- ---------- ---------- -------TCC ACGCCCG---
Arabidopsi.thali GTGCG--CCC CCGG-GCGC- CCTTGAAAA- TCCG-GAGGA CCGAGTGCCG ---------- ---------- ---------- -------CTC ACGCCCG---
Fragaria.anana GTGCG--GCC CCGG-CGGC- CCTTGAAAA- TCCG-GAGGA CCGAGTGCCA ---------- ---------- ---------- -------TTC ACGCCCG---
Chlorella.ellip GCGCG--CCA TCGA-CGGT- CCTTGAAAA- TCCG-GAGGA GC-ATTTCCG ---------- ---------- ---------- -------ATC TTGCCAG---
nEuglena.graci GGCAG---TC ACTG-GTTC- CAATGAACA- GCCT-GAAGG ATTCTCGTGC CTCAG----- ---------- ---------- -------GAC CCTTGTG---
Entamoeba.histo GTATT--TTT GCAG-TCTT- -CATAAAAA- TTAA-AGGGA ATCTTAGCAT AAAGCTAATT AAAG------ ---------- -------AAT TCTTTTG---
nTrypanosom.bruce GTGAG---TT CGGC-GCAT- TAAAGCAAAA ACCT-GGGGT GTTC------ ---------- ---------- ---------- -------CCA ACTGCAG---
Giardia.intes CGCGT---CC CCGG-CCGC- CCCTGAAAA- -GCC-G-GGG GGCGC----- ---------- ---------- ---------- -------CGG CCGCGC----
*********
5201
Mycobacter.lepra ---------- ---------- ---------- ---------- -CCCGTACCC -CAAACCGAC AC-AGGT--- -GGTCA-GGT A-GAGCA--T ACCAAGGCG-
Streptomyc.grise ---------- ---------- ---------- ---------- -CCCGTACCC -TAAACCGAC TC-AGGT--- -GGTCA-GGT A-GAGAA--T ACCGAGGCG-
Bacillus.subti ---------- ---------- ---------- ---------- -CCCGTACCG -CAAACCGAC AC-AGGT--- -AGGCG-AGG A-GAGAA--T CCTAAGGTG-
Lactobacil.delbr ---------- ---------- ---------- ---------- -CCCGTACCG -CAAACCGAC AC-AGGT--- -AGTCG-AGG A-GAGTA--T CCTCAGGTG-
Leuconosto.mesen ---------- ---------- ---------- ---------- -CCCGTACCG -CAAACCGAC AC-AGGT--- -AGTCG-AGT G-GAGAA--C ACTAAGGTG-
Staphyloco.aureu ---------- ---------- ---------- ---------- -CCCGTACCG -CAAACCGAC AC-AGGT--- -AGTCA-AGA T-GAGAA--T TCTAAGGTG-
Bartonella.bacil ---------- ---------- ---------- ---------- -ACCGTACCC -GAAACCGAC AC-AGGT--- -GGACA-GGT A-GAGAA--T ACCAAGGCG-
Rhodopseud.palus ---------- ---------- ---------- ---------- -ACCGTACCC -GAAACCGAC AC-AGGT--- -GGACT-GGT A-GAGTA--T ACCAAGGCG-
Rickettsia.ricke ---------- ---------- ---------- ---------- -ACCGTACCC -GAAACCGAC AC-AGGT--- -GGACA-GGT A-GAGTA--T ACCAAGGCG-
Bordetella.bronc ---------- ---------- ---------- ---------- -ACCGTACCG -CAAACCGAC AC-AGGT--- -GGGAC-GGG ATGAATA--T TCCAAGGCG-
Escherichi.coli ---------- ---------- ---------- ---------- -ATCGTACCC -CAAACCGAC AC-AGGT--- -GGTCA-GGT A-GAGAA--T ACCAAGGCG-
Haemophilu.influ ---------- ---------- ---------- ---------- -ACCGTACTG -AAAACCGAC AC-AGGT--- -GGTCA-GGT A-GAGAA--T ACTCAGGCG-
Thermus.therm ---------- ---------- ---------- ---------- -CCCGTACCG -CAAACCGAC AC-AGGT--- -GGGCG-GGT GCAAGAG--C ACTCAGGCG-
Thermotoga.marit ---------- ---------- ---------- ---------- -CCCGTTCCG -CAAACCGAC AC-AGGT--- -GGGCG-GGC T-GAGAA--G GCTCAGGGG-
Zea.mays.CP ---------- ---------- ---------- ---------- -CCTGTACCC -GAAACCGAC AC-AGGT--- -GGGTA-GGT A-GAGAA--T ACCTAGGGG-
nChlamydomo.reinh.CP ---------- ---------- ---------- ---------- -CCTGTACCT -GAAACCGAC AC-AGGT--- -AGGTT-GGT A-GAGAA--T ACCAAGGGG-
Euglena.graci.CP ---------- ---------- ---------- ---------- -CCTGTACCG -TAAACTGAC AC-AGGT--- -AGGTT-AGT A-GAATA--T ACTAAGGAG-
Desulfuroc.mobil ---------- ---------- ---------- ---------- -ACCGTACCG -AGAACCGAC AC-AGGT--- -GCCCCTGGG T-TAGAA--G CCCAAGGCGT
Sulfolobus.acido ---------- ---------- ---------- ---------- -ACCGTACCT -AGAACCGAC AC-TGGT--- -GCCCCTGGG T-GAGAA--G CCCAAGGCGT
Thermofilu.pende ---------- ---------- ---------- ---------- -CCCGTACCG -AGAACCGAC AC-AGGT--- -GCCCCTGGG T-GAAAA--G CCCAAGGCGT
Thermoprot.tenax ---------- ---------- ---------- ---------- -TCCGTACCG -AGAACCGAC GC-AGGT--- -GTTCCTGGG T-GAAAA--G CCCAAGGCGG
Halobacter.halob ---------- ---------- ---------- ---------- -TTCGTACCG -AGATCCGAC AC-AGGT--- -GCTC-TGGC A-GAGGA--A GCCAAGGCCT
Halobacter.maris ---------- ---------- ---------- ---------- -TCCGTACCG -AGAACCGAC AC-AGGT--- -GTCCATGGC G-GCGAA--A GCCAAGGCCT
Halococcus.morrh ---------- ---------- ---------- ---------- -TCCGTACCC -AGATCCGAC AC-AGGT--- -GTCCGTGGC G-GCGAA--A GCCAAGGCCT
Natronobac.magad ---------- ---------- ---------- ---------- -TCCGTACCG -AGATCCGAC AC-AGGT--- -ACTCATGGC G-GCGAA--A GCCAAGGTCT
Methanococ.vanni ---------- ---------- ---------- ---------- -TCCGTACCC -AGAACCGAC AC-TGGT--- -GCCCCTAGG T-GAGTA--T CCTAAGGCGT
Methanococ.janna ---------- ---------- ---------- ---------- -ACCGTACCC -AGAACCGAC AC-AGGT--- -GCCCCTAGG C-GAGTA--T CCTAAGGCGT
Xenopus.laevi ---------- ---------- ---------- ---------- -GCCGTACCC -ATATCCGCA GC-AGGT--- -CTCC-AAGG T-GAACA--G CCTCTGGCAT
Homo.sapie ---------- ---------- ---------- ---------- -GCCGTACCC -ATATCCGCA GC-AGGT--- -CTCC-AAGG T-GAACA--G CCTCTGGCAT
Candida.albic ---------- ---------- ---------- ---------- -GTCGTACTC -ATAACCGCA GC-AGGT--- -CTCC-AAGG T-TAACA--G CCTCTAGTT-
Saccharomy.cerev ---------- ---------- ---------- ---------- -GTCGTACTG -ATAACCGCA GC-AGGT--- -CTCC-AAGG T-GAACA--G CCTCTAGTT-
Schizosacc.pombe ---------- ---------- ---------- ---------- -GTCGTACTC -ATAACCGCA GC-AGGT--- -CTCC-AAGG T-GAACA--G CCTCTAGTT-
Oryza.sativ ---------- ---------- ---------- ---------- -GTCGTACTC -ATAACCGCA TC-AGGT--- -CTCC-AAGG T-GAACG--A CCTCTGGCC-
Arabidopsi.thali ---------- ---------- ---------- ---------- -GTCGTACTC -ATAACCGCA TC-AGGT--- -CTCC-AAGG T-GAACA--G CCTCTGGTC-
Fragaria.anana ---------- ---------- ---------- ---------- -GTCGTACTC -ATAACCGCA TC-AGGT--- -CTCC-AAGG T-GAACA--G CCTCTGGTC-
Chlorella.ellip ---------- ---------- ---------- ---------- -GTCGTACTC -ATAACCGCA TC-AGGT--- -CTCC-AAGG T-GAACA--G CCTCTAGTC-
nEuglena.graci ---------- ---------- ---------- ---------- -TCCGTACTG CATCACCGCA GC-CGGT--- -CTCC-TCGA C-TAGAC--G TCGCTTGTC-
Entamoeba.histo ---------- ---------- ---------- ---------- -CTCGTACTA -ATAACCGCA AC-AGGT--- -CTCC-AAGA A-GCAAA--A TCTTTAGTTA
nTrypanosom.bruce ---------- ---------- ---------- ---------- -ACCGTACTC -ATCACCGCA TC-AGGT--- -CCCC-AAGC A-TCGAA--T GCTCTGGTAA
Giardia.intes ---------- ---------- ---------- ---------- -GCCGTACCG ----ACCGCA GC-AGGA--- -CTCC-GGGG T-CAGCA--G CCTCTAGCGC
************************************************************
5301
Mycobacter.lepra -TACGAG-AT AACTATG-GT T--------- ------AAGG AA-CTCGGCA AAA-TGCCTC CGTAAC-TTC G-GGAGAAGG GGGGCCGGAA TATCGTGAA-
Streptomyc.grise -TTCGGG-TG AACTATG-GT T--------- ------AAGG AA-CTCGGCA AAA-TGCCCC CGTAAC-TTC G-GGAGAAGG GGGGCCATCA C-TGGTGAT-
Bacillus.subti -ATCGAG-AG AACTCTC-GT T--------- ------AAGG AA-CTCGGCA AAA-TGACCC CGTAAC-TTC G-GGAGAAGG GGTGCTCTGT TAGGGT----
Lactobacil.delbr -AGCGAG-AG AACTCTC-GT T--------- ------AAGG AA-CTCGGCA AAA-TGGCCC CGTAAC-TTC G-GGAGAAGG GGCGCTGGTC ----------
Leuconosto.mesen -AGCGAG-AG AANNCTC-GT T--------- ------AAGG AA-CTCGGCA AAA-TGACCC CGTAAC-NTC G-GGAGAAGG GGTGCTCATG ----------
Staphyloco.aureu -AGCGAG-CG AACTCTC-GT T--------- ------AAGG AA-CTCGGCA AAA-TGACCC CGTAAC-TTC G-GGAGAAGG GGTGCTCTTT A-GGGT----
Bartonella.bacil -CTTGAG-AG AACTACG-TT G--------- ------AAGG AA-CTCGGCA AAT-TGCACG CGTAAC-TTC G-GAAGAAGC GTGACCCTTT AGCGG-----
Rhodopseud.palus -CTTGAG-AG AACTATG-TT G--------- ------AAGG AA-CTCGGCA ATT-TACCTC CGTAAC-TTC G-GGATAAGG AGGCCTTCTG TTTGC-----
Rickettsia.ricke -CTTGAG-AG AACGATG-CT G--------- ------AAGG AA-CTAGGCA AAT-TGCATC TGTAAC-TTC G-GAAGAAAG ATGACCTGTA TATGG-----
Bordetella.bronc -CTTGAG-AG AACTCAG-GA G--------- ------AAGG AA-CTCGGCA AAT-TGATAC CGTAAC-TTC G-GGAGAAGG TATACCCTGG TAGTGTGAA-
Escherichi.coli -CTTGAG-AG AACTCGG-GT G--------- ------AAGG AA-CTAGGCA AAA-TGGTGC CGTAAC-TTC G-GGAGAAGG CACGCTGATA TGTAGGTGAG
Haemophilu.influ -CTTGAG-AG AACTCGG-GT G--------- ------AAGG AA-CTAGGCA AAA-TAGCAC CGTAAC-TTC G-GGAGAAGG TGCGCCGGCG TA-GATTGTA
Thermus.therm -CGCGGG-AG AACCCTC-GC C--------- ------AAGG AA-CTCTGCA AGT-TGGCCC CGTAAC-TTC G-GGAGAAGG GGTGCTCCCT GG-GGT----
Thermotoga.marit -AGCGGG-TT AACCCTC-GC C--------- ------AAGG AA-CTCGGCA AAT-TGGCCC CGTAAC-TTC G-GGAGAAGG GGTGCCGCGT TAGGGTGAAC
Zea.mays.CP -CGCGAG-AC AACTCTC-TC T--------- ------AAGG AA-CTCGGCA AAA-TAGCCC CGTAAC-TTC G-GGAGAAGG GGTGCCCCCT ----------
nChlamydomo.reinh.CP -CGCGAG-AG AACTCTC-TC T--------- ------AAGG AA-CTCGGCA AAC-TGGCCC CGTAAC-TTC G-GAAGAAGG GGCACCCATC ----------
Euglena.graci.CP -CGCGAG-AT AACTCTT-TC T--------- ------AAGG AA-CTCGGCA AAA-TGACTT CGTAAC-TTC G-GAAGAAGA AGTACCTC-- ----------
Desulfuroc.mobil -GTGGGGGCT AACCCAG-GC C--------- ------AGGG AA-CTCGGCA AAT-TGGCCC CGTAAC-TTC G-GGAGAAGG GGTGCCTGCG GTCTTGGGG-
Sulfolobus.acido -CTGAGGGGT AACCCAG-GC T--------- ------AGGG AA-CTCGGCA AAT-TAGCCC CGTAAC-TTC G-GGAGAAGG GGTGCCTATC GTGGTTT---
Thermofilu.pende -GGCGGG-GT AACCCAG-GC T--------- ------AGGG AA-CTCGGCA AAT-TAGCCC CGTAAC-TTC G-GGAGAAGG GGTGCCTGCG GTCTTGGGG-
Thermoprot.tenax -CTTGGG-TT AACCCAG-GC C--------- ------AGGG AA-CTCGGCA AAT-TGGCCC TGTAAC-TTC G-GGAGAAGG GGTGCCTGCG GTCTTGGGG-
Halobacter.halob -GTCGGGAAT AACCGAC-GT T--------- ------AGGG AA-TTCGGCA AGT-TAGTCC CGTAAG-TTC G-CGATAAGG GATGCCTGCC A---------
Halobacter.maris -GTCGGGAGC AACCAAC-GT T--------- ------AGGG AA-TTCGGCA AGT-TAGTCC CGTACC-TTC G-GAAGAAGG GATGCCTGCT CC--------
Halococcus.morrh -GTCGGGGAG AACCGAC-GT T--------- ------AGGG AA-TTCGGCA AGT-TAGTCC CGTACG-TTC G-CAATAAGG GATGCCTGCC TC--------
Natronobac.magad -GTCGGGAGC AACCGAC-GT T--------- ------AGGG AA-TTCGGCA AGT-TAGTCC CGTACG-TTC G-CAATAAGG GATGCCTGCC TC--------
Methanococ.vanni -AGCGGA-TG AATCTAG-TC G--------- ------AGGG AA-GTCGGCA AAT-TGGCTC CGTAAC-TTC G-GGAGAAGG AGTGCCAGTG ATCTTGT---
Methanococ.janna -GTCGGG-AG AATCCGG-CC C--------- ------AGGG AA-GTCGGCA AAT-TGGCCC CGTAAC-TTC G-GGAGAAGG GGTGCCTGCG GTCTTCT---
Xenopus.laevi -GTTAGA-AC AATGTAG-GT A--------- ------AGGG AA-GTCGGCA AGT-CAGATC CGTAAC-TTC G-GGATAAGG ATTGGCTCTA AGGGCTGGGT
Homo.sapie -GTTGGA-AC AATGTAG-GT A--------- ------AGGG AA-GTCGGCA AGC-CGGATC CGTAAC-TTC G-GGATAAGG ATTGGCTCTA AGGGCTGGGT
Candida.albic -GATAGA-AT AATGTAG-AT A--------- ------AGGG AA-GTCGGCA AAA-TAGATC CGTAAC-TTC G-GGATAAGG ATTGGCTCTA AGGATCGGGT
Saccharomy.cerev -GATAGA-AT AATGTAG-AT A--------- ------AGGG AA-GTCGGCA AAA-TAGATC CGTAAC-TTC G-GGATAAGG ATTGGCTCTA AGGGTCGGGT
Schizosacc.pombe -GATAGA-AC AATGTAG-AT A--------- ------AGGG AA-GTCGGCA AAA-TGGATC CGTAAC-TTC G-GGATAAGG ATTGGCTCTA AGGGTTGGGT
Oryza.sativ -AATGGA-AG AATGTAG-GC A--------- ------AGGG AA-GTCGGCA AAA-CGGATC CGTAAC-TTC G-GGAAAAGG ATTGGCTCTG AGGGCTGGGC
Arabidopsi.thali -GATGGA-AC AATGTAG-GC A--------- ------AGGG AA-GTCGGCA AAA-TGGATC CGTAAC-TTC G-GGAAAAGG ATTGGCTCTG AGGGCTGGGC
Fragaria.anana -GATGGA-AC AATGTAG-GC A--------- ------AGGG AA-GTCGGCA AAA-TGGATC CGTAAC-TTC G-GGAAAAGG ATTGGCTCTG AGGGCTGGGC
Chlorella.ellip -GATAGA-AC AATGTAG-AT A--------- ------AGGG AA-GTCGGCA AAA-TAGATC CGTAAC-TTC G-GGAAAAGG ATTGGCTCTG AGGGTTGGGC
nEuglena.graci -CACGGACGA AATGCAG-CT A--------- ------AGGG AA-GTCGGCA AAC-TGGCCG TGCACC-TTT G-GAAGATAC GGTGGCTCCA GAGGCCAAGT
Entamoeba.histo -AATAGA-AT AACGCAG-GT A--------- ------AGGG AA-GTCGGCA ACA-TAGCTC TGTAAG-TTA G-CAAGAAAG AGTAGCTCTG GTGATTTCCT
nTrypanosom.bruce -CATAGA-GA AAGGTACACT C--------- ------AGGG AA-GTCGGCA AAA-TAGATG CGTAAG-TTC G-CAAGAAGC ATTGGCTCTG AGGGCAAAGT
Giardia.intes --GGGAG-CG AACGCGG-CT C--------- ------AGGG AA-GTCGGCA AGC-CGGCTC CGTAAC-CTC G-GGAAAAGG AGTGGCTCTG ACGG------
****** ********************************************************
5401
Mycobacter.lepra -CACC----- -------CTT GC-------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Streptomyc.grise -CCGA----- -------TTT AC-------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Bacillus.subti ---------- --------GC AA-------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Lactobacil.delbr ---------- --------GC AA-------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Leuconosto.mesen ---------- --------GT AAAA------ ---------- ---------- ---------- ---------- ---------- ---------- ----------
Staphyloco.aureu ---------- --------TA AC-------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Bartonella.bacil ---------- --------GC AA-------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Rhodopseud.palus ---------- --------GC AA-------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Rickettsia.ricke ---------- --------GC AA-------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Bordetella.bronc GC-------- -------CTG CGC------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Escherichi.coli GTCC------ -------CTC -GC------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Haemophilu.influ AGGG------ -------CTA -GC------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Thermus.therm ---------- -------GAT GA-------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Thermotoga.marit CCAGGGGAAG GG------GC AA-------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Zea.mays.CP ---------- -------CGC AAA------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
nChlamydomo.reinh.CP ---------- ------CGTA ACAA------ ---------- ---------- ---------- ---------- ---------- ---------- ----------
Euglena.graci.CP ---------- --------TA AT-------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Desulfuroc.mobil ---------- -------CAC AC-------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Sulfolobus.acido ---------- --------AA CA-------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Thermofilu.pende ---------- -------CAT AC-------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Thermoprot.tenax ---------- -------TTC AC-------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Halobacter.halob ---------- -------CGC AA-------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Halobacter.maris ---------- -------GGA AC-------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Halococcus.morrh ---------- -------GGA AT-------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Natronobac.magad ---------- -------GGA AA-------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Methanococ.vanni ---------- -------TTA AAT------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Methanococ.janna ---------- -------CTA AGT------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Xenopus.laevi CGGTCGG-GC TGGGGCGCGA AG-CGGGGCT GGGCACGCGC CGCGGCTGGA CGA-GGCGCC CCGGCGGCC- ----TCCCTC CTCCCGCCCC C-CTCTCTCT
Homo.sapie CGGTCGG-GC TGGGGCGCGA AG-CGGGGCT GGGCGCGCGC CGCGGCTGGA CGA-GGCGC- G-CGCCCCCC CC--ACGCCC GGGGCACCCC CCTCGCGGCC
Candida.albic GTCTTGG-GC CTTGTGT--A GACGCGG-CG GTGACTGTTG GCGG-GCTGT T--------- ---------- --TCAC---- ---------- ----------
Saccharomy.cerev AGTGAG-GGC CTTGGTC--A GACGCAG-CG GGCGTGCTTG TGG--ACTGC TTGGTGGGG- ---------- --CTTG---- ---------- ----------
Schizosacc.pombe ACGTTGG-GC CTTGGAACCT GAACGGTTGC TGGACTGAGC GTGG-ACCGA TGTCTTTTCT CGCCT----- --TTCG---- ---------- ----------
Oryza.sativ TCGGGGG-TC CG-GCCCCGA ACCCGTCGGC TGCCGGCGGA CTGCTCGAGC TGC------- ---------- --TCGC---- ---------- ----------
Arabidopsi.thali TCGGGGG-TC CCAGTTCCGA ACCCGTCGGC TGTCAGCGGA CTGCTCGAGC TGC------- ---------- --TTCC---- ---------- ----------
Fragaria.anana ACGGGGG-TC CTGGTCCCGA ACCCGTCGGC TGTCGGAGAA CTGCTCGAGC TGC------- ---------- --TTCC---- ---------- ----------
Chlorella.ellip TTAGGGG-TC TGTGCCCAGA AACCATTGGC TGTTGGAGGT CTGCCC---- -----GAGCT GCTCACGCGG CGAGGGC--- ---------- ----------
nEuglena.graci CAGCAGG-CC CTGTCGTGGG GGTTGTGGGA GTTACGGTCG ATCACCCTGT GGGATGGCCT CTCGGGGCCG TTCTGCGGGG CTGTCTTCGC CGTGGCCTCT
Entamoeba.histo T--------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
nTrypanosom.bruce GGGGGTC-CA CAGGAGGGCC AG-TGTCCTT TCGTGCGCGG CCCGTTTTCT GCGTTTTGTT GTTTTGGCGT TCGC-GCCTT AGCACATACG CGGCGACCGT
Giardia.intes ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
5501
Mycobacter.lepra ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Streptomyc.grise ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Bacillus.subti ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Lactobacil.delbr ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Leuconosto.mesen ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Staphyloco.aureu ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Bartonella.bacil ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Rhodopseud.palus ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Rickettsia.ricke ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Bordetella.bronc ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Escherichi.coli ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Haemophilu.influ ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Thermus.therm ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Thermotoga.marit ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Zea.mays.CP ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
nChlamydomo.reinh.CP ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Euglena.graci.CP ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Desulfuroc.mobil ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Sulfolobus.acido ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Thermofilu.pende ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Thermoprot.tenax ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Halobacter.halob ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Halobacter.maris ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Halococcus.morrh ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Natronobac.magad ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Methanococ.vanni ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Methanococ.janna ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Xenopus.laevi CCGG---CCC CCCCTCGCGG GGGG-CCGCG GGGGCG---- ---------- ---------- ---------- ---------- ---------- ----------
Homo.sapie CTCCCCCGCC CCACCCGCGC GCG----CCG CTCGCTCCCT CCCCACCCCG CGCCCTCTCT CTCTCTCTCT CCCCCGCTCC CCGTCCTCCC CCCTCCCCGG
Candida.albic ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Saccharomy.cerev ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Schizosacc.pombe ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Oryza.sativ ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Arabidopsi.thali ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Fragaria.anana ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Chlorella.ellip ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
nEuglena.graci GCTT------ ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Entamoeba.histo ---------- ---------- -------GTA A--------- ---------- ---------- ---------- ---------- ---------- ----------
nTrypanosom.bruce TTTGCTCGGA ACGTGAAGGC TACCCTCCCG AGCCGTA--- ---------- ---------- ---------- ---------- ---------- ----------
Giardia.intes ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
5601
Mycobacter.lepra ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Streptomyc.grise ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Bacillus.subti ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Lactobacil.delbr ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Leuconosto.mesen ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Staphyloco.aureu ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Bartonella.bacil ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Rhodopseud.palus ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Rickettsia.ricke ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Bordetella.bronc ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Escherichi.coli ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Haemophilu.influ ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Thermus.therm ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Thermotoga.marit ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Zea.mays.CP ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
nChlamydomo.reinh.CP ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Euglena.graci.CP ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Desulfuroc.mobil ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Sulfolobus.acido ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Thermofilu.pende ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Thermoprot.tenax ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Halobacter.halob ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Halobacter.maris ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Halococcus.morrh ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Natronobac.magad ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Methanococ.vanni ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Methanococ.janna ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Xenopus.laevi ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Homo.sapie GGGAGCGCCG CGTGGGGGCG CGGCGGGGGG AGAAGGGTCG GGGCGGCAGG GGCCGCGCGG CGGCCGCCGG GGCGGCCGGC GGGGGCAGGT CCCCGCGAGG
Candida.albic ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Saccharomy.cerev ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Schizosacc.pombe ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Oryza.sativ ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Arabidopsi.thali ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Fragaria.anana ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Chlorella.ellip ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
nEuglena.graci ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Entamoeba.histo ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
nTrypanosom.bruce ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Giardia.intes ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
5701
Mycobacter.lepra ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Streptomyc.grise ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Bacillus.subti ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Lactobacil.delbr ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Leuconosto.mesen ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Staphyloco.aureu ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Bartonella.bacil ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Rhodopseud.palus ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Rickettsia.ricke ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Bordetella.bronc ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Escherichi.coli ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Haemophilu.influ ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Thermus.therm ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Thermotoga.marit ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Zea.mays.CP ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
nChlamydomo.reinh.CP ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Euglena.graci.CP ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Desulfuroc.mobil ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Sulfolobus.acido ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Thermofilu.pende ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Thermoprot.tenax ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Halobacter.halob ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Halobacter.maris ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Halococcus.morrh ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Natronobac.magad ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Methanococ.vanni ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Methanococ.janna ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Xenopus.laevi ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Homo.sapie GGGG------ -CCCCGGGGA CCCGGGGGG- -CCGGCGGCG GCGCGGACTC TGGACGCGAG CCGGGCCCTT CCCGTGGATC GCCCCAGCTG CGGCGGGCGT
Candida.albic ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Saccharomy.cerev ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Schizosacc.pombe ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Oryza.sativ ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Arabidopsi.thali ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Fragaria.anana ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Chlorella.ellip ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
nEuglena.graci ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Entamoeba.histo ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
nTrypanosom.bruce ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Giardia.intes ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
5801
Mycobacter.lepra ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Streptomyc.grise ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Bacillus.subti ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Lactobacil.delbr ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Leuconosto.mesen ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Staphyloco.aureu ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Bartonella.bacil ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Rhodopseud.palus ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Rickettsia.ricke ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Bordetella.bronc ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Escherichi.coli ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Haemophilu.influ ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Thermus.therm ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Thermotoga.marit ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Zea.mays.CP ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
nChlamydomo.reinh.CP ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Euglena.graci.CP ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Desulfuroc.mobil ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Sulfolobus.acido ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Thermofilu.pende ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Thermoprot.tenax ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Halobacter.halob ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Halobacter.maris ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Halococcus.morrh ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Natronobac.magad ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Methanococ.vanni ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Methanococ.janna ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Xenopus.laevi ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Homo.sapie CGCGGCCGCC CCCGGGGAGC CCGGCGGCGG CGCGGCGCGC CCCCCACCCC CACCCCACGT CTCGGTCGCG CGCGCGTCCG CTGGGGGCGG GAGCGGTCGG
Candida.albic ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Saccharomy.cerev ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Schizosacc.pombe ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Oryza.sativ ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Arabidopsi.thali ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Fragaria.anana ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Chlorella.ellip ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
nEuglena.graci ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Entamoeba.histo ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
nTrypanosom.bruce ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Giardia.intes ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
5901
Mycobacter.lepra ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Streptomyc.grise ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Bacillus.subti ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Lactobacil.delbr ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Leuconosto.mesen ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Staphyloco.aureu ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Bartonella.bacil ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Rhodopseud.palus ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Rickettsia.ricke ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Bordetella.bronc ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Escherichi.coli ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Haemophilu.influ ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Thermus.therm ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Thermotoga.marit ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Zea.mays.CP ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
nChlamydomo.reinh.CP ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Euglena.graci.CP ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Desulfuroc.mobil ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Sulfolobus.acido ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Thermofilu.pende ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Thermoprot.tenax ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Halobacter.halob ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Halobacter.maris ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Halococcus.morrh ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Natronobac.magad ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Methanococ.vanni ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Methanococ.janna ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Xenopus.laevi ---GGGGGGC GCGGGGGG-C CGGGAGCCGC CCGCCGGCGG CGGCGACTCT GGACGCGCGC CGGGCCCTTC CTGTGGATCG CCCCAGCTGC GGCGCGCGCC
Homo.sapie GCGGCGGCGG TCGGCGGGCG GCGGGGCGGG GCGGTTCGTC CCCCCGCCCT ACCCCCCCGG CCCCGTCCGC CCCCCGTTCC CCCCTCCTCC TCGGCGCGCG
Candida.albic ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- -------GAC
Saccharomy.cerev ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------C TCTGCTAGGC
Schizosacc.pombe ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---GGGTGAG AAGGGATGTT
Oryza.sativ ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------G
Arabidopsi.thali ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------G
Fragaria.anana ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------G
Chlorella.ellip ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
nEuglena.graci ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Entamoeba.histo ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
nTrypanosom.bruce ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Giardia.intes ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
6001
Mycobacter.lepra ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Streptomyc.grise ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Bacillus.subti ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Lactobacil.delbr ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Leuconosto.mesen ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Staphyloco.aureu ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Bartonella.bacil ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Rhodopseud.palus ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Rickettsia.ricke ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Bordetella.bronc ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Escherichi.coli ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Haemophilu.influ ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Thermus.therm ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Thermotoga.marit ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- --------CC
Zea.mays.CP ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
nChlamydomo.reinh.CP ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Euglena.graci.CP ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Desulfuroc.mobil ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Sulfolobus.acido ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Thermofilu.pende ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Thermoprot.tenax ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Halobacter.halob ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Halobacter.maris ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Halococcus.morrh ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Natronobac.magad ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Methanococ.vanni ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Methanococ.janna ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Xenopus.laevi TCTCCCCCGC GCCGTCCCCC TCC-GCGCCT CCCCCC---G TCA----GGG GACGGGGCGC GGGCGGCGGG GCGGCCGGGG CGGGGCGCGC GGCCTCGGCC
Homo.sapie GCGGCGGCGG CGGCAGGCGG CGGAGGGGCC GCGGGCCGGT CCCCCCCGCC GGGTCCGCCC CCGGGGCCGC GG--TTCCGC GCGCGC--CT CGCCTCGGCC
Candida.albic GGA-CTGCTG GTGGATG--C TG-------- ---------- -CTGT-AGAC ACGCT----T GGT------- -----AGGT- CTTTATGGCC G-TC-CGGGG
Saccharomy.cerev GGA-CTACTT GCGTGCC--T TG-------- ---------- -TTGT-AGAC GGCCT----T GGT------- ----AGGTCT CTTGTAGACC G-TCGCTTGC
Schizosacc.pombe GGA--CCTGC TTGGACCTTG GC-------- ---------- GGCCGGGAAG TCCTTGGTCG GGCTTTTCTC CTTCTCGGGG ATTATGCTCT T-AC-TGGCG
Oryza.sativ CGGCGAAGGC GGGCCGCCGT C--------- --------GG CCGGCCGGGG GAC-GG-CCG GGAA------ --CGCGCCCC --TCG-GGGG C-CTTCCCCG
Arabidopsi.thali CGGCGAGAGC GGGTCGCCGG C--------- --------TG CCGGCCGGGG GAC-GA-CTG GGAA------ ---CGGCTCT -CTCG-GGAG C-TTTCCCCG
Fragaria.anana CGGCGAGA-C GGGTCGTCGC G--------- --------TG CCGGCCGGGG GAC-GACCTG GGAA------ ---CGCTCCT --TCG-GGGG C--TTTCCCG
Chlorella.ellip ---------- ---------- -------GGG CCGCCGCGTG CC-TTTGGCG GACGGGCACA GAA------- ------AGGC -TTCG-GCCG C---TCCCTA
nEuglena.graci ---------- ---------- ---------- ---------- -----CATCC CGGACAGGGG CAACCCTTCG GGTCCTCGTG GCCTGTAGGG CCGACCTGTT
Entamoeba.histo ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
nTrypanosom.bruce ---------- ---------- -TC-TACTAA CCTCCTTCTG GTGTGTTGTT TTTACGTCTC ACTCCCGCGC AGGTGTTTTC GCTTCCTTTT TTTGGTTGCG
Giardia.intes ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
6101
Mycobacter.lepra -------GGT GGGA-GCGGG ATCCGG-TC- --------GC AGAGACCAGT GAGAAG-CGA C-TGTTTACT AAAAACA-CA GGTCCGTGC- -GAAGTCG--
Streptomyc.grise -------TCG GTGA-GCTGG GGGTGG-CC- --------GC AGAGACCAGC GAGAAG-CGA C-TGTTTACT AAAAACA-CA GGTCCGTGC- -GAAGCCG--
Bacillus.subti ---------- -----GCCCG AGAGAG-CC- --------GC AGTGAATAGG CCCAGG-CGA C-TGTTTAGC AAAAACA-CA GGTCTCTGC- -GAAGCCG--
Lactobacil.delbr ---------- ---------- GATCAG-CC- --------GC AGTGAAAAGG CCCAAG-CAA C-TGTTTATC AAAAACA-CA GGCATCTGC- -AAAATCG--
Leuconosto.mesen ---------- ---------- CATGAG-CC- --------GC AGTGAATAGG CCCAGG-CGA C-TGTTTATC AAAAACA-CA GGTTTCTGC- -AAAATCG--
Staphyloco.aureu ---------- -----GCCCA GAAGAG-CC- --------GC AGTGAATAGG CCCAAG-CGA C-TGTTTATC AAAAACA-CA GGTCTCTGC- -TAAACCG--
Bartonella.bacil ---------- -----CCGTT AGAGGG-TG- --------GC ACAGACCAGG GGGTAG-CGA C-TGTTTACC AAAAACA-CA GGGCTCTGC- -GAAGTCG--
Rhodopseud.palus ---------- -----GCAGG CAGGAG-GG- --------GC ACAGACCAGG GGGTGG-CAA C-TGTTTAAC AAAAACA-CA GGGCTCTGC- -GAAATCG--
Rickettsia.ricke ---------- -----CCATG TGCAGG-TG- --------GC ACAAGCTAGG GGGTAG-CGA C-TGTTTATT AAAAACA-CA GGGCTCTGC- -AAAGTCA--
Bordetella.bronc --------GC -TGA-GCATG AAGGGG-TC- --------GC AGAGAATCGG TGGCTG-CGA C-TGTTTATT AAAAACA-CA GCACTCTGC- -AAAGACG--
Escherichi.coli -------GGA TGGA-GCTGA AATCAG-TC- --------GA AGATACCAGC TGGCTG-CAA C-TGTTTATT AAAAACA-CA GCACTGTGC- -AAACACG--
Haemophilu.influ -------CCC TGAA-GGTTG AACCGG-TC- --------GA AGATACCAGC TGGCTG-CAA C-TGTTTATT AAAAACA-CA GCACTCTGC- -AAACACG--
Thermus.therm ---------- -----GCCCC GGGGAG-CC- --------GC AGTGAACAGG CTCTGG-CGA C-TGTTTACC AAAAACA-CA GCTCTCTGC- -GAACTCG--
Thermotoga.marit CGGAAACTGG GGGA-GCCCG AGGCGG-TC- --------GC AGTGACAAGG CCCTGG-CGA C-TGTTTACC AAAAACA-CA GGTCTCTGC- -TAACTCG--
Zea.mays.CP ---------- ---------- AGGGGG-TC- --------GC AGTGACCAGG CCCGGG-CGA C-TGTATACC AAAAACA-CA GGTCTCCGC- -AAAGTCG--
nChlamydomo.reinh.CP ---------- ---------- GGTGGG-TC- --------GC AGTGACCAGG CCCAGG-CGA C-TGTTTACC AAAAACA-CA GGTCTCCGC- -AAAGTCG--
Euglena.graci.CP ---------- ---------- --GAGG-TG- --------GC AGAAAAGAGG TCCAAG-CGA C-TGCTTACC AAAAGCA-CA GGTCTCCGC- -GAAGTTG--
Desulfuroc.mobil ---------- -CCCTGGGAC CGCAGG-CC- --------GC AGTGCCTAGG GGGGCC-TGA C-TGTTTAAT AAAAACA-TA GGTCCCCGC- -AAGCCCG--
Sulfolobus.acido ---------- ---AAGCCAC GATAGG-TC- --------GC AGTGACCAGA GGGACC-TGA C-TGTTTAAT AAAAACA-TA GGTCCCCGC- -TAGCCCG--
Thermofilu.pende ---------- -CCCTGGGAC CGCAGG-TC- --------GC AGTGACAAGG GGGACC-CGA C-TGTTTAAT AAAAACA-TA GGTCCCCGC- -GAGCCCG--
Thermoprot.tenax ---------- -CCCTGGGAC CGCAGG-TC- --------GC AGTGACAAGG GGGACC-TGA C-TGTTTAAC AAAAACA-TA GGTCCCCGC- -GAGCCCG--
Halobacter.halob ---------- -------TGA GGCAGG-TC- --------GC AGTGACTCGG AGGCTC-CGA C-TGTCTAAT AACAACA-TA GGTGACCGC- -AAATCCG--
Halobacter.maris ---------- --------GG AGCAGG-TC- --------GC AGTGACTCGG AAGCTC-GGA C-TGTCTAGT AATAACA-TA GGTGACCGC- -AAATCCG--
Halococcus.morrh ---------- --------GA GGCAGG-TC- --------GC AGCGACTCGG ACGCTC-CAA C-TGTCTAAT AACAACA-CA GGTGACCGC- -AAATCCG--
Natronobac.magad ---------- --------GA GGCAGG-TC- --------GC AGTGACTCGG GCGCTC-CGA C-TGTCTAGT AACAACA-TA GGTGACCGC- -AAATCCG--
Methanococ.vanni ---------- ---ATGGGAT CGCTGG-TC- --------GC AGTGACCAGG GAGGTC-CGA C-TGTTTAAT ACAAACA-TA GGTCTTAGC- -GAGCCTG--
Methanococ.janna ---------- --GAGGGGAC CGCAGG-TC- --------GC AGTGGCCAGG GGGGTC-CGA C-TGTTTAAT AAAAACA-CA GGTCTTGGC- -TAGCCCG--
Xenopus.laevi GGCG-CCTAG CAG-CTGACT TAGAAC-TG- --------GT GCGGACCAGG GGAATC-CGA C-TGTTTAAT TAAAACA-AA GCATCGCGA- -AGGCCCG--
Homo.sapie GGCG-CCTAG CAG-CCGACT TAGAAC-TG- --------GT GCGGACCAGG GGAATC-CGA C-TGTTTAAT TAAAACA-AA GCATCGCGA- -AGGCCCG--
Candida.albic CACG-TTTAA CGA-TCAACT TAGAAC-TG- --------GT ACGGACAAGG GGAATC-TGA C-TGTCTAAT TAAAACA-TA GCATTGTGA- -TGGTCAG--
Saccharomy.cerev TACA-ATTAA CAGATCAACT TAGAAC-TG- --------GT ACGGACAAGG GGAATC-TGA C-TGTCTAAT TAAAACA-TA GCATTGCGA- -TGGTCAG--
Schizosacc.pombe TACG-TTTAA CAA-CCAACT TAGAAC-TG- --------GT ACGGACAAGG GGAATC-TGA C-TGTCTAAT TAAAACA-TA GCATTGCGA- -TGGCCAG--
Oryza.sativ GGCG-TCGAA CAG-CCGACT CAGAAC-TG- --------GT ACGGACAAGG GGAATC-CGA C-TGTTTAAT TAAAACA-AA GCATTGCGA- -TGGTCCT--
Arabidopsi.thali GGCG-TCGAA CAG-TCAGCT CAGAAC-TG- --------GT ACGGACAAGG GGAATC-CGA C-TGTTTAAT TAAAACA-AA GCATTGCGA- -TGGTCCC--
Fragaria.anana GGCGTTCGAA CAG-TCGACT CAGAAC-TG- --------GT ACGGACAAGG GGAATC-CGA C-TGTTTAAT TAAAACA-AA GCATTGCGA- -TGGTCCC--
Chlorella.ellip GGCG-ACGAA CAA-CCGACT CAGAAC-TG- --------GT ACGGACAAGG GGAATC-CGA C-TGTTTAAT TAAAACA-AA GCATTGTGA- -TGGTCCT--
nEuglena.graci GACTAACCAG TGG-CTCGTG TGGAAC-TG- --------TT GCTGTGCAGG GGAATC-TGA C-TGTTTAAT TGAAACC-CA GCTTTGTGA- -AGGGACC--
Entamoeba.histo AAGG-ATTA- AAA-TCGAAT CAGAAC-TT- --------TA AAGGTT-AGG GGAATC-CGA C-TGTTTAAT AAAAACA-TA GCATTCTGA- -TAAATCT--
nTrypanosom.bruce CACCTACAAA TTG-CCAACT CAGAAC-TG- --------CT TACGGC--GG GGAATC-CAA C-TGTATAAT TAAAACA-TA GGTTTGTGA- -TGCATCC--
Giardia.intes ---------- CGCGCCGGGT CAGAAC-TG- --------GA ACGGACGCGG GGATCC-CGA C-TGTTTACT AGAAACA-CA GCGTCGCGA- -GGGCCGC--
************* ******************************
6201
Mycobacter.lepra ---------- ---------- ---------- ---------- ---------- ---------- ---------T AAGACGATGT -ATACGGACT GAC-GCC-TG
Streptomyc.grise ---------- ---------- ---------- ---------- ---------- ---------- ---------T AAGGCGATGT -ATACGAACT GAC-GCC-TG
Bacillus.subti ---------- ---------- ---------- ---------- ---------- ---------- ---------T AAGGCGAAGT -ATAGGGGCT GAC-GCC-TG
Lactobacil.delbr ---------- ---------- ---------- ---------- ---------- ---------- ---------T AAGATGAAGT -ATAGGTGCT GAC-ACC-TG
Leuconosto.mesen ---------- ---------- ---------- ---------- ---------- ---------- ---------T AAGATGAAGT -ATAGGGGCT GAC-ACC-TG
Staphyloco.aureu ---------- ---------- ---------- ---------- ---------- ---------- ---------T AAGGTGATGT -ATAGGGGCT GAC-GCC-TG
Bartonella.bacil ---------- ---------- ---------- ---------- ---------- ---------- ---------C AAGACGATGT -ATAGGGTCT GAC-GCC-TG
Rhodopseud.palus ---------- ---------- ---------- ---------- ---------- ---------- ---------C AAGATGACGT -ATAGGGTCT GAC-GCC-TG
Rickettsia.ricke ---------- ---------- ---------- ---------- ---------- ---------- ---------A TAGACGATGT -ATAGGGTCT GAC-GCC-TG
Bordetella.bronc ---------- ---------- ---------- ---------- ---------- ---------- ---------A AAGTCGACGT -ATAGGGTGT GAC-GCC-TG
Escherichi.coli ---------- ---------- ---------- ---------- ---------- ---------- ---------A AAGTGGACGT -ATACGGTGT GAC-GCC-TG
Haemophilu.influ ---------- ---------- ---------- ---------- ---------- ---------- ---------A AAGTGGACGT -ATAGGGTGT GAT-GCC-TG
Thermus.therm ---------- ---------- ---------- ---------- ---------- ---------- ---------T AAGAGGAGGT -ATAGGGAGC GAC-GCT-TG
Thermotoga.marit ---------- ---------- ---------- ---------- ---------- ---------- --------AA AAGAGGAAGT -ATAGGGACT GAC-GCC-TG
Zea.mays.CP ---------- ---------- ---------- ---------- ---------- ---------- ---------T AAGACCATGT -ATGGGGGCT GAC-GCC-TG
nChlamydomo.reinh.CP ---------- ---------- ---------- ---------- ---------- ---------- ---------T AAGACAATAT -ATGGGGGCT GAC-GCC-TG
Euglena.graci.CP ---------- ---------- ---------- ---------- ---------- ---------- ---------A AAAACGATGT -ATGGGGGCC GAG-GCC-TG
Desulfuroc.mobil ---------- ---------- ---------- ---------- ---------- ---------- ---------A AAGGGTTTGT -ACGGGGGCT GAA-TCC-TG
Sulfolobus.acido ---------- ---------- ---------- ---------- ---------- ---------- ---------A AAGGGTGTGT -ACGGGGGCT AAA-TCC-TG
Thermofilu.pende ---------- ---------- ---------- ---------- ---------- ---------- ---------A AAGGGTGAGT -ACGGGGGCT GAA-TCC-TG
Thermoprot.tenax ---------- ---------- ---------- ---------- ---------- ---------- ---------T AAGGGTTTGT -ACGGGGGCT GAA-TCC-TG
Halobacter.halob ---------- ---------- ---------- ---------- ---------- ---------- ---------C AAGGACGCGT -ACGGTCACT GAA-TCC-TG
Halobacter.maris ---------- ---------- ---------- ---------- ---------- ---------- ---------C AAGGACTCGT -ACGGTCACT GAA-TCC-TG
Halococcus.morrh ---------- ---------- ---------- ---------- ---------- ---------- ---------C AAGGACTCGT -ACGGTCACT GAA-TCC-TG
Natronobac.magad ---------- ---------- ---------- ---------- ---------- ---------- ---------C AAGGACTCGT -ACGGTCACT GAA-TCC-TG
Methanococ.vanni ---------- ---------- ---------- ---------- ---------- ---------- ---------A AAAGGTGTGT -ACTAAGGCC GAC-GCC-TG
Methanococ.janna ---------- ---------- ---------- ---------- ---------- ---------- ---------T AAGGGTGTGT -ACCAAGGCC GAC-GCC-TG
Xenopus.laevi ---------- ---------- ---------- ---------- ---------- ---------- --------AG GCGGGTGTTG -ACGCGATGT GAT-TTC-TG
Homo.sapie ---------- ---------- ---------- ---------- ---------- ---------- --------CG GCGGGTGTTG -ACGCGATGT GAT-TTC-TG
Candida.albic ---------- ---------- ---------- ---------- ---------- ---------- --------AA AGTGATGTTG -ACACAATGT GAT-TTC-TG
Saccharomy.cerev ---------- ---------- ---------- ---------- ---------- ---------- --------AA AGTGATGTTG -ACGCAATGT GAT-TTC-TG
Schizosacc.pombe ---------- ---------- ---------- ---------- ---------- ---------- --------AA AGTGGTGTTG -ACGCAATGT GAT-TTC-TG
Oryza.sativ ---------- ---------- ---------- ---------- ---------- ---------- ---------C GCGGATGC-G -ACGCAATGT GAT-TTC-TG
Arabidopsi.thali ---------- ---------- ---------- ---------- ---------- ---------- ---------T GCGGATGCTA -ACGCAATGT GAT-TTC-TG
Fragaria.anana ---------- ---------- ---------- ---------- ---------- ---------- ---------T GCGGATGTTA -ACGCAATGT GAT-TTC-TG
Chlorella.ellip ---------- ---------- ---------- ---------- ---------- ---------- ---------A AAGGATGTTG -ACACAATGT GAT-TTC-TG
nEuglena.graci ---------- ---------- ---------- ---------- ---------- ---------- --------AG CTGGCTGGTT -CCGTGAGGT GAC-TTC-TG
Entamoeba.histo ---------- ---------- ---------- ---------- ---------- ---------- --------AA AAGGTTCATT -ACAGAATGT GAT-TTC-TG
nTrypanosom.bruce ---------- ---------- ---------- ---------- ---------- ---------- --------AA GTGGTGTATG -TCGCAAACT GAT-TTC-TG
Giardia.intes ---------- ---------- ---------- ---------- ---------- ---------- ---------A CCCGGCGCTG -GCGCGACGT GAT-TTC-TG
********* ************
6301
Mycobacter.lepra CCC-GGTGCT G-GAA-GGTT AAGAGGACCT GTTAACCC-- ---------- ---------- --GAAA---G GGTGAAGCGG AGAATTTAAG CCCCAGTAAA
Streptomyc.grise CCC-GGTGCT G-GAA-CGTT AAGGGGACCG GTTAGCTGAC T--------- ---------- --TTCGGGTC GGCGAAGCTG AGAACTTAAG CGCCAGTAAA
Bacillus.subti CCC-GGTGCT G-GAA-GGTT AAGAGGAGCG CTTAGC---- ---------- ---------- --GTAA---- -GCGAAGGTG CGAATTGAAG CCCCAGTAAA
Lactobacil.delbr CCC-GGTGCT G-GAA-GGTT AAGAGGAGAG CTTAGC---- ---------- ---------- --GCAA---- -GCGAAGGTT TGAATTGAAG CCCCAGTAAA
Leuconosto.mesen CCC-GGTGCT G-GAA-GGTT AAAAGGAGTG CTTAGC---- ---------- ---------- --TTCG---- -GCGAAGGTA CGAATTGAAG CCCCAGTAAA
Staphyloco.aureu CCC-GGTGCT G-GAA-GGTT AAGAGGAGTG GTTAGC---- ---------- ---------- --TTCT---- -GCGAAGCTA CGAATCGAAG CCCCAGTAAA
Bartonella.bacil CCC-GGTGCT G-GAA-GGTT AAGAGGAGAT GT-------- ---------- ---------- --GCAA---- ------GCAT TGAATTGAAG CCCCAGTAAA
Rhodopseud.palus CCC-GGTGCC G-GAA-GGTT AAGAGGAGGA GT-------- ---------- ---------- --GCAA---- ------GCTC TGAATTGAAG CCCCGGTAAA
Rickettsia.ricke CCC-AGTGCT G-GAA-GATT AAAAGGAGGG GT-------- ---------- ---------- --GCAAA--- ------GCTC TGAATTGAAG TCCCAGTGAA
Bordetella.bronc CCC-GGTGCC G-GAA-GGTT AAGTGATGGG GT-------- ---------- ---------- --GCAA---- ------GCTC TTGATCGAAG CCCCGGTAAA
Escherichi.coli CCC-GGTGCC G-GAA-GGTT AATTGATGGG GTTAGC---- ---------- ---------- --GCAA---- -GCGAAGCTC TTGATCGAAG CCCCGGTAAA
Haemophilu.influ CCC-GGTGCT G-GAA-GGTT AATTGATGGT GTCATC---- ---------- ---------- --GAAA---- -GAGAAGCAC CTGATCGAAG CCCCAGTAAA
Thermus.therm CCC-GGTGCC G-GAA-GGTC AAGGGGAGGG GT-------- ---------- ---------- --GCAA---- ------GCCC CGAACCGAAG CCCCGGTGAA
Thermotoga.marit CCC-AGTGCC G-GAA-GGTT AAGGGGAGGG GTGAGGCTCC C--------- ---------- -CTTGT-GGG AGCGTAGCTC CGACCCGAAG CCCCGGTAAA
Zea.mays.CP CCC-AGTGCC G-GAA-GGTC AAGGAAGTTG GTGAACTG-- ---------- ---------- --ATGA---C AGGGAAGCCG GCGACCGAAG CCCCGGTGAA
nChlamydomo.reinh.CP CCC-AGTGCC G-GAA-GGTT AAGGAAGTTG GTTATTTC-- ---------- ---------- --GTAA---G AAAAAAGCTG ACGACCGAAG CCCCGGTGAA
Euglena.graci.CP CTC-AGTGCA G-GAA-GGTT AAAGAAATTG GTTAGC---- ---------- ---------- --GTAA---- -GCAAAGCTA GTGACTGAAG CCCCTGTGAA
Desulfuroc.mobil GCC-ACTGGC G-GTC-CGTG AAA---CCGG G--------- ---------- ---------- -GTCCAA--- -------CCC GG---CGAAG CGCCGCTGAA
Sulfolobus.acido GCC-ACTGGT G-GTT-GGTT AAA---TCCG G--------- ---------- ---------- -GTTCAA--- -------CCG GG---CGAAG CCCCACCGAA
Thermofilu.pende GCC-ACTGGC G-GTA-CGTG AAA---CCCG G--------- ---------- ---------- -GTACAA--- -------CCG GG---CGAAG CGCCGCCGAA
Thermoprot.tenax GCC-ACTGGC G-GTA-CGTG AAC---CCCG G--------- ---------- ---------- -GTCCAA--- -------CCG GG---CGAAG CGCCGCTGAA
Halobacter.halob CCC-AGTGCG G-GTA-TCTG AAC---ACCC A--------- ---------- ---------- -GTACAA--- -------TGG GG---CGAAG GACCCGTTAA
Halobacter.maris CCC-AGTGCA G-GTA-TCTG AAC---ACCT C--------- ---------- ---------- -GTACAA--- -------GAG GA---CGAAG GACCTGTCAA
Halococcus.morrh CCC-AGTGCG G-GTA-TCTG AAC---ACCC G--------- ---------- ---------- -GTACAA--- -------CGG GA---CGAAG GACCCGTCAA
Natronobac.magad CCC-AGTGCG G-GTA-TCTG AAC---ACCC CT-------- ---------- ---------- --TACA---- ------AGGG GA---CGAAG GACCCGTTAA
Methanococ.vanni CCC-AGTGCT G-GTA-CGTG AAC---CCCG G--------- ---------- ---------- -TTCCAA--- -------CCG GG---CGAAG CGCCAGTAAA
Methanococ.janna CCC-AGTGCC G-GTA-CGTG AAA---CCCG G--------- ---------- ---------- -GTACAA--- -------CCG GG---CGAAG CGCCGGTAAA
Xenopus.laevi CCC-AGTGCT CTGAA-TGTC AAAG----TG A--------- ---------- ---------- -AGAAAT--- -------TCA A----TGAAG CGCGGGTAAA
Homo.sapie CCC-AGTGCT CTGAA-TGTC AAAG----TG A--------- ---------- ---------- -AGAAAT--- -------TCA A----TGAAG CGCGGGTAAA
Candida.albic CCC-AGTGCT CTGAA-TGTC AAAG----TG A--------- ---------- ---------- -AGAAAT--- -------TCA A----CCAAG CGCGGGTAAA
Saccharomy.cerev CCC-AGTGCT CTGAA-TGTC AAAG----TG A--------- ---------- ---------- -AGAAAT--- -------TCA A----CCAAG CGCGAGTAAA
Schizosacc.pombe CCC-AGTGCT CTGAA-TGTC AAAG----TG A--------- ---------- ---------- -AGAAAT--- -------TCA A----CCAAG CGCGGGTAAA
Oryza.sativ CCC-AGTGCT CTGAA-TGTC AAAG----TG A--------- ---------- ---------- -AGAAAT--- -------TCA A----CCAAG CGCGGGTAAA
Arabidopsi.thali CCC-AGTGCT CTGAA-TGTC AAAG----TG A--------- ---------- ---------- -AGAAAT--- -------TCA A----CCAAG CGCGGGTAAA
Fragaria.anana CCC-AGTGCT CTGAA-TGTC AAAG----TG A--------- ---------- ---------- -AGAAAT--- -------TGA A----CCAAG CGCGGGTAAA
Chlorella.ellip CCC-AGTGCT CTGAA-TGTC AAAG----TG A--------- ---------- ---------- -AGAAAT--- -------TCA A----CCAAG CGCGGGTAAA
nEuglena.graci CCC-AGTGCT CTGAT-TGTC AATG----CG A--------- ---------- ---------- -AGAGAT--- -------TCA G----CCAAG CGCGGGTAAA
Entamoeba.histo CCC-AGTGCT CTGAA-TGTC AAGG----TA A--------- ---------- ---------- -TGAAAT--- -------TTA C----TTAAG CGCGGGTTAA
nTrypanosom.bruce CCC-AGTGCT CTGAA-TGTC AACG------ ---------- ---------- ---------- ---AGAT--- -------TCA C----CGACG CGCGGGTAAA
Giardia.intes CCC-AGTGCC ACGAC-CGTC ACCG----TG A--------- ---------- ---------- -AGCGAT--- -------CCG C----CGAAG CCCTGGTAAA
************************ ****************
6401
Mycobacter.lepra CGGC--GGTG GTAA-CTATA ACCATCCTAA GGT-AGCGAA ATTCCTT--G TCGGGTAAGT -TCCGACC-T GCACGAATGG CGTAACGACT TCTCA-----
Streptomyc.grise CGGC--GGTG GTAA-CTATA ACCATCCTAA GGT-AGCGAA ATTCCTT--G TCGGGTAAGT -TCCGACC-T GCACGAATGG CGTAACGACT TCTCG-----
Bacillus.subti CGGC--GGCC GTAA-CTATA ACGGTCCTAA GGT-AGCGAA ATTCCTT--G TCGGGTAAGT -TCCGACC-C GCACGAAAGG CGCAACGATC TGGGC-----
Lactobacil.delbr CGGC--GGCC GTAA-CTATA ACGGTCCTAA GGT-AGCGAA ATTCCTT--G TCGGGTAAGT -TCCGACC-T GCACGAAAGG TGTAATGATT TGGGC-----
Leuconosto.mesen CGGC--GGCC GTAA-CTATA ACGGTCCTAA GGT-AGCGAA ATTCCTT--G TCGGGTAAGT -TCCGACC-C GCACGAAAGG CGTAACGATC TGGGC-----
Staphyloco.aureu CGGC--GGCC GTAA-CTATA ACGGTCCTAA GGT-AGCGAA ATTCCTT--G TCGGGTAAGT -TCCGACC-C GCACGAAAGG CGTAACGATT TGGGC-----
Bartonella.bacil CGGC--GGCC GTAA-CTATA ACGGTCCTAA GGT-AGCGAA ATTCCTT--G TCGGGTAAGT -TCCGACC-T GCACGAATGG CGTAACGACT TCCCC-----
Rhodopseud.palus CGGC--GGCC GTAA-CTATA ACGGTCCTAA GGT-AGCGAA ATTCCTT--G TCGGGTAAGT -TCCGACC-T GCACGAATGG CGTAATGACT TCCCC-----
Rickettsia.ricke CGGC--GGCC GTAA-CTATG ACGGTCCTAA GGT-AGCGAA ATTCCTT--G TCGGGTAAGT -TCCGACC-C GCACGAATGG CGTAACGATT TCCCC-----
Bordetella.bronc CGGC--GGCC GTAA-CTATA ACGGTCCTAA GGT-AGCGAA ATTCCTT--G TCGGGTAAGT -TCCGACC-T GCACGAATGG CGTAACGATG GCCAC-----
Escherichi.coli CGGC--GGCC GTAA-CTATA ACGGTCCTAA GGT-AGCGAA ATTCCTT--G TCGGGTAAGT -TCCGACC-T GCACGAATGG CGTAATGATG GCCAG-----
Haemophilu.influ CGGC--GGCC GTAA-CTATA ACGGTCCTAA GGT-AGCGAA ATTCCTT--G TCGGGTAAGT -TCCGACC-T GCACGAATGG CATAATGATG GCCAG-----
Thermus.therm CGGC--GGCC GTAA-CTATA ACGGTCCTAA GGT-AGCGAA ATTCCTT--G TCGGGTAAGT -TCCGACC-T GCACGAAAAG CGTAACGACC GGAGC-----
Thermotoga.marit CGGC--GGCC GTAA-CTATA ACGGTCCTAA GGT-AGCGAA ATTCCTT--G TCGGGTAAGT -TCCGACC-T GCATGAATGG CGTAACGACT GGGGC-----
Zea.mays.CP CGGC--GGCC GTAA-CTATA ACGGTCCTAA GGT-AGCGAA ATTCCTT--G TCGGGTAAGT -TCCGACC-C GCACGAAAGG CGTAACGATC TGGGC-----
nChlamydomo.reinh.CP CGGC--GGTC GTAA-CTATA ACGATCCTAA GGT-AGCGAA ATTCATT--G TCGAGTAAGT -TTCGACC-T GCACGAAAGG CGTAACGATC TGGGC-----
Euglena.graci.CP CAGC--GGCA ATAA-CTATA ATTGTCCTAA GGT-AGCGAA ATTCCTT--G TCGGGTAAGT -TCCGACC-C GCACGAAAGG CTTAACGATT TGGAC-----
Desulfuroc.mobil GGCC--GGGA GTAA-CTCTG ACTCTCTTAA GGT-AGCCAA ATGCCTT--G CCGGGTAAGT -TCCGGCG-C GCATGAATGG ATCAACGAGG TCCCC-----
Sulfolobus.acido GGCC--GGGG GTAA-CTCTG ACCCTCTTAA GGT-AGCCAA ATGCCTT--G CCGGGTAAGT -TCCGGCG-C GCATGAATGG ATCAACGCGG TCCCT-----
Thermofilu.pende GGCC--GGGA GTAA-CTCTG ACTCTCTTAA GGT-AGCCAA ATGCCTT--G CCGGGTAAGT -TCCGGCG-C GCATGAATGG ATCAACGAGG TCCCC-----
Thermoprot.tenax GGCC--GGGG GTAA-CTCTG ACCCTCTTAA GGT-AGCCAA ATGCCTT--G CCGGGTAAGT -TCCGGCG-T GCATGAATGG ATCAACGAGG TCCCC-----
Halobacter.halob CGGC--GGGG GTAA-CTATG ACCCTCTTAA GGT-AGCGTA GTACCTT--G CCGCTTCAGT -AGCGGCT-T GCATGAATGG ATCAACGAGA GCCTC-----
Halobacter.maris CGGC--GGGG GTAA-CTATG ACCCTCTTAA GGT-AGCGTA GTACCTT--G CCGCATCAGT -AGCGGCT-T GCATGAATGG ATTAACCAGA GCTTC-----
Halococcus.morrh CGGC--GGGG GTAA-CTATG ACCCTCTTAA GGT-AGCGTA GTACCTT--G CCGCTTCAGT -AGCGGCT-C GCATGAATGG ATGAATGAGA GCGTC-----
Natronobac.magad CGGC--GGGG GTAA-CTATG ACCCTCTTAA GGT-AGCGTA GTACCTT--G CCGCTTCAGT -AGCGGCT-T GCATGAATGG ATCAACGAGA GCGCC-----
Methanococ.vanni CGGC--GGGG GTAA-CTATA ACCCTCTTAA GGT-AGCGAA ATTCCTT--G TCGGGCAAGT -TCCGACC-T GCATGAATGG CGTAACGAGA CCTCC-----
Methanococ.janna CGGC--GGGG GTAA-CTATA ACCCTCTTAA GGT-AGCGAA ATTCCTT--G TCGGGTAAGT -TCCGACC-T GCATGAATGG CGTAACGAGA CCCCC-----
Xenopus.laevi CGGC--GGGA GTAA-CTATG ACTCTCTTAA GGT-AGCCAA ATGCCTC--G TCATCTAATT -AGTGACG-C GCATGAATGG ATGAACGAGA TTCCC-----
Homo.sapie CGGC--GGGA GTAA-CTATG ACTCTCTTAA GGT-AGCCAA ATGCCTC--G TCATCTAATT -AGTGACG-C GCATGAATGG ATGAACGAGA TTCCC-----
Candida.albic CGGC--GGGA GTAA-CTATG ACTCTCTTAA GGT-AGCCAA ATGCCTC--G TCATCTAATT -AGTGACG-C GCATGAATGG ATTAACGAGA TTCCC-----
Saccharomy.cerev CGGC--GGGA GTAA-CTATG ACTCTCTTAA GGT-AGCCAA ATGCCTC--G TCATCTAATT -AGTGACG-C GCATGAATGG ATTAACGAGA TTCCC-----
Schizosacc.pombe CGGC--GGGA GTAA-CTATG ACTCTCTTAA GGT-AGCCAA ATGCCTC--G TCATCTAACT -AGTGACG-C GCATGAATGG ATTAACGAGA TTCCC-----
Oryza.sativ CGGC--GGGA GTAA-CTATG ACTCTCTTAA GGT-AGCCAA ATGCCTC--G TCATCTAATT -AGTGACG-C GCATGAATGG ATTAACGAGA TTCCC-----
Arabidopsi.thali CGGC--GGGA GTAA-CTATG ACTCTCTTAA GGT-AGCCAA ATGCCTC--G TCATCTAATT -AGTGACG-C GCATGAATGG ATTAACGAGA TTCCC-----
Fragaria.anana CGGC--GGGA GTAA-CTATG ACTCTCTTAA GGT-AGCCAA ATGCCTC--G TCATCTAATT -AGTGACG-C GCATGAATGG ATTAACGAGA TTCCC-----
Chlorella.ellip CGGC--GGGA GTAA-CTATG ACTCTCTTAA GGT-AGCCAA ATGCCTC--G TCATCTAATT -AGTGACG-C GCATGAATGG ATTAACGAGA TTCCC-----
nEuglena.graci CGGC--GGGA GTAA-CTATG ACTCTCTTAA GGT-AGCCAA ATGCCTC--G TCAACCAATT -ATTGACG-C GCATGAATGG ATCAACGAGA TTCCT-----
Entamoeba.histo CGGC--GGGA GTAA-CTATG ACTCTCTTAA GGT-AGCCAA ATGCCTC--G TCATCTAATT -AGTGACG-C GCATGAATGG ATCACCGTGA TTCCC-----
nTrypanosom.bruce CGGC--GGGA GTAA-CTATG ACTCTCTTAA GGT-AGCCAA ATGCCTC--G TCTTCCAATT -AGAGACG-C GCATGAATGG ATTAATGAGA TTCCC-----
Giardia.intes CGGC--GGGA GTAA-CTATG ACTCTCTTAA GGT-AGCCAA ATGCCTC--G TCGGGCAATT -TCCGACG-T GCATGAATGG ACCAACGAGG ATCCC-----
************************************************************************************************
6501
Mycobacter.lepra ---------- ---------A CTGTCTCAAC CATAGACTCG GCGAAATTGC ACTACGA-GT A-AAGAT-GC -TCGT----- ---------- ----------
Streptomyc.grise ---------- ---------A CTGTCTCAAC CATAGGCCCG GTGAAATTGC ACTACGA-GT A-AAGAT-GC -TCGT----- ---------- ----------
Bacillus.subti ---------- ---------A CTGTCTCAAC GAGAGACTCG GTGAAATTAT AGTACCT-GT G-AAGAT-GC -AGGT----- ---------- ----------
Lactobacil.delbr ---------- ---------A CTGTCTCAAC GAGAGACTCG GTGAAATTAT AATACCC-GT G-AAGAT-GC -GGGT----- ---------- ----------
Leuconosto.mesen ---------- ---------A CTGTCTCAAC GAGGGACTCG GTGAAATTTA AATACCC-GT G-AAGAT-GC -GGGT----- ---------- ----------
Staphyloco.aureu ---------- ---------A CTGTCTCAAC GAGAGACTCG GTGAAATCAT AGTACCT-GT G-AAGAT-GC -AGGT----- ---------- ----------
Bartonella.bacil ---------- ---------G CTGTCTCCAA CGTAGACTCA GTGAAATTGA ATTCCCCCGT G-AAGAT-GC -GGGG----- ---------- ----------
Rhodopseud.palus ---------- ---------G CTGTCTCCAA CATAGACTCA GTGAAATTGA ATTCCCC-GT G-AAGAT-GC -GGGG----- ---------- ----------
Rickettsia.ricke ---------- ---------A CTGTCTCCAG TATCGACTCA GCGAAATTGA ATTCTCC-GT G-AAGAT-GC -GGAG----- ---------- ----------
Bordetella.bronc ---------- ---------A CTGTCTCCTC CTGAGACTCA GCGAAGTTGA AGTGTTT-GT G-ATGAT-GC -AATC----- ---------- ----------
Escherichi.coli ---------- ---------G CTGTCTCCAC CCGAGACTCA GTGAAATTGA ACTCGCT-GT G-AAGAT-GC -AGTG----- ---------- ----------
Haemophilu.influ ---------- ---------G CTGTCTCCAC CCGAGACTCA GTGAAATTGA AATCGCC-GT G-AAGAT-GC -GGTG----- ---------- ----------
Thermus.therm ---------- ---------G CTGTCTCGGC GAGGGACCCG GTGAAATTGA ACTGGCC-GT G-AAGAT-GC -GGCC----- ---------- ----------
Thermotoga.marit ---------- ---------A CTGTCTCGGC GGGGGGCCCG GCGAAATTTC AGTCTGG-GT G-AAGAT-GC -CCAG----- ---------- ----------
Zea.mays.CP ---------- ---------A CTGTCTCGGA GAGAGGCTCG GTGAAATAGA CATGTCT-GT G-AAGAT-GC -GGAC----- ---------- ----------
nChlamydomo.reinh.CP ---------- ---------G CTGTCTCGGA GAGAGGCTCG GTGAAATAGA CTTGTCCCGT G-AAGAT-GC -GGAC----- ---------- ----------
Euglena.graci.CP ---------- ---------A CTGTCTCAGA AAGAGACTCG GTGAAATAGA ATTGACT-GT G-AAGAT-GC -GGTC----- ---------- ----------
Desulfuroc.mobil ---------- ---------A CTGTCCTGGC CTGGGGCCCC GTGAAGACAC GGAGCCG-GT G-CATAG-GC -CGGC----- ---------- ----------
Sulfolobus.acido ---------- ---------A CTGTCCCAGC CTGGGGCCTC GTGAACGCCC TGAGCCG-GT G-CACAG-TC -CGGC----- ---------- ----------
Thermofilu.pende ---------- ---------A CTGTCCCAGC CTGGGACCCG CTGAACCCGC AA-CCAG-GT G-CAGAG-TC -CTGG----- ---------- ----------
Thermoprot.tenax ---------- ---------A CTGTCCCGGC CTGGGGCCCA GCGAACCCAC CT-CCAG-GT G-CACAG-TC -CTGG----- ---------- ----------
Halobacter.halob ---------- ---------A CTGTCCCAAC GTTGGGCCCG GTGAACTGTA CGTTCCA-GT G-CGGAG-TC -TGGA----- ---------- ----------
Halobacter.maris ---------- ---------A CTGTCCCAAC GTTGGGCCCG GTGAACTGTA CATTCCA-GT G-CGGAG-TC -TGGA----- ---------- ----------
Halococcus.morrh ---------- ---------A CTGTCCCAAC GTTGGGCCCG GTGAACTGTA CGTTCCA-GT G-CGGAG-TC -TGGA----- ---------- ----------
Natronobac.magad ---------- ---------A CTGTCCCAAC GTTGGGCCCG GTGAACTGTA CGTTCCA-GT G-CGGAG-TC -TGGA----- ---------- ----------
Methanococ.vanni ---------- ---------A CTGTCCCCGA CTAGAATCCG GTGAACCTAC CATTCCG-GC G-CAAAG-GC -CGGA----- ---------- ----------
Methanococ.janna ---------- ---------A CTGTCCCGGG CCGGAACCCG GTGAACCTAC CATTCCG-GT G-CAAAG-GC -CGGA----- ---------- ----------
Xenopus.laevi ---------- ---------A CTGTCCCTAC CTACTATCTA GCGAAACCAC A-GCCAA-GG G-AACGG-GC -TTGG----- ---------- ----------
Homo.sapie ---------- ---------A CTGTCCCTAC CTACTATCCA GCGAAACCAC A-GCCAA-GG G-AACGG-GC -TTGG----- ---------- ----------
Candida.albic ---------- ---------A CTGTCCCTAT CTACTATCTA GCGAAACCAC A-GCCAA-GG G-AACGG-GC -TTGG----- ---------- ----------
Saccharomy.cerev ---------- ---------A CTGTCCCTAT CTACTATCTA GCGAAACCAC A-GCCAA-GG G-AACGG-GC -TTGG----- ---------- ----------
Schizosacc.pombe ---------- ---------A CTGTCCCTAT CTACTATCTA GCGAAACCAC A-GCCTG-GG G-AACGG-GC -CAGG----- ---------- ----------
Oryza.sativ ---------- ---------A CTGTCCCTGT CTACTATCCA GCGAAACCAC A-GCCAA-G- G-AACGG-GC -TTGG----- ---------- ----------
Arabidopsi.thali ---------- ---------A CTGTCCCTGT CTACTATCCA GCGAAACCAC A-GCCAA-GG G-AACGG-GC -TTGG----- ---------- ----------
Fragaria.anana ---------- ---------A CTGTCCCTGT CTACTATCCA GCGAAACCAC A-GCCAA-GG G-AACGG-GC -TTGG----- ---------- ----------
Chlorella.ellip ---------- ---------A CTGTCCCTAT CTACTATCTA GCGAAACCAC A-GCCAA-GG G-AACGG-GC -TTGG----- ---------- ----------
nEuglena.graci ---------- ---------G CTGTCCCTAG TCGCTGTCTG GTGAACCAAC A-ACCAA-GG G-AACGG-GC -TTGG----- ---------- ----------
Entamoeba.histo ---------- ---------A CTGTCCCTAT CTGCAATCTA GTGAAACCAC A-GTCAA-GG G-AACGG-GC -TTGA----- ---------- ----------
nTrypanosom.bruce ---------- ---------T CTGTCCCGAG TTACTATCTA GCGAAACGAC A-GTCAA-GG G-AACGG-AC -TTGA----- ---------- ----------
Giardia.intes ---------- ---------A CTGTCCCGAG CCGCGCCTCC G-GAGCCTCC A-GCCTC-GG G-AACGG-GC -GAGG----- ---------- ----------
********* ********** *************
6601
Mycobacter.lepra ---------- ---------- ----TACGTG CGG-CAGGAC GA-AAAGACC CCG-G-GACC TTC-ACT-AC AACTTGGTAT T-----GATG TTCG-GTGCG
Streptomyc.grise ---------- ---------- ----TTCGCG CAG-CAGGAC GG-AAAGACC CCG-G-GACC TTT-ACT-AT AGTTTGATAT T-----GGTG TTCG-GTTCG
Bacillus.subti ---------- ---------- ----TACCCG CGA-CAGGAC GG-AAAGACC CCGTG-GAGC TTT-ACT-GC AGCCTGATAT T-----GAAT GTTG-GTACA
Lactobacil.delbr ---------- ---------- ----TACCCG CGA-CAGGAC GG-AAAGACC CCATG-GAGC TTT-ACT-GC AGTTTAATAT T-----GGGT ATCT-GTCAA
Leuconosto.mesen ---------- ---------- ----TACCCG CGA-CAGGAC GG-AAAGACC CCATG-GAGC TTT-ACT-GT AGCTTGATAT T-----GAAT GTTT-GTGCT
Staphyloco.aureu ---------- ---------- ----TACCCG CGA-CAGGAC GG-AAAGACC CCGTG-GAGC TTT-ACT-GT AGCCTGATAT T-----GAAA TTCG-GCACA
Bartonella.bacil ---------- ---------- ----TTCCTG CGG-TTAGAC GG-AAAGACC CCGTG-CACC TTT-ACT-AT AGCTTTACAC T-----GGCA TTTG-TGTCG
Rhodopseud.palus ---------- ---------- ----TTCCTG CGG-TCAGAC GG-AAAGACC CCGTG-CACC TTT-ACT-GT AGCTTTGCGC T-----GGTA TTCG-TGACT
Rickettsia.ricke ---------- ---------- ----TTCCCG CGG-TCAGAC GG-AAAGACC CCGTG-AACC TTT-ACT-AT AGCTTTGCAC T-----GGTG TTAG-GAATC
Bordetella.bronc ---------- ---------- ----TACCCG CGG-CTAGAC GG-AAAGACC CCATG-AACC TTT-ACT-GT AGCTTTGCAT T-----GGAC TGTG-AACCG
Escherichi.coli ---------- ---------- ----TACCCG CGG-CAAGAC GG-AAAGACC CCGTG-AACC TTT-ACT-AT AGCTTGACAC T-----GAAC ATTG-AGCCT
Haemophilu.influ ---------- ---------- ----TACCCG CGG-CTAGAC GG-AAAGACC CCGTG-AACC TTT-ACT-AT AGCTTGACAC T-----GAAC ATTG-AATTT
Thermus.therm ---------- ---------- ----TACCCG TGG-CAGGAC GA-AAAGACC CCGTG-GAGC TTT-ACT-GC AGCCTGGTGT T-----GGCT CTTG-GTCGC
Thermotoga.marit ---------- ---------- ----TACCCG CGG-CTAGAC GG-AAAGACC CCGTG-GAGC TTT-ACT-GC AGCCTGGTAT T-----GGGC TCTG-GTGCA
Zea.mays.CP ---------- ---------- ----TACCTG CAC-CTGGAC AG-AAAGACC CTATG-AAGC TTT-ACT-GT TCCCTGGGAT T-----GGCT TTGG-GCTTT
nChlamydomo.reinh.CP ---------- ---------- ----TACCTA CAC-CTGGAC AG-AAAGACC CTATG-AAGC TTG-ACT-GT ATCTTGGAAT T-----GGGT TTGG-GCTTT
Euglena.graci.CP ---------- ---------- ----TACTTG CAC-TTGGAC AG-AAAGACC CTATG-AAGC TTT-ACT-GT ATCCTGAAAT T-----GGTT TCGG-GCTTT
Desulfuroc.mobil ---------- ---------- ----AACCCC CCG-CAGGGC GA-TAAGTCC CCGTG-GAGC TTC-ACC-GC AGCCTGGCGC T-----GGCA TCCG-GGTCG
Sulfolobus.acido ---------- ---------- ----ATCTCC CTA-CACCGA GA-GAAGACC CCGTG-GAGC TTC-ACC-GC AGCCTGGCGT T-----GTCC CTCG-GGCGT
Thermofilu.pende ---------- ---------- ----GAGTCC CGG-TGGGGC GA-GAAGACC CCGTG-GAGC TTC-ACA-GC AGCCTGGCGT T-----GAGA CACG-GCTGC
Thermoprot.tenax ---------- ---------- ----GACCCC CGA-CGGGGC GA-GAAGTCC CTGTG-GAGC TTC-ACT-GC AGCCTGTCGT T-----GCGG AGGG-GCGGG
Halobacter.halob ---------- ---------- ----GACCCC CAA-GGGGAA GC-GAAGACC CTATA-GAGC TTT-ACT-GC AGGCTGTCGC T-----GGGA CACG-GTCGC
Halobacter.maris ---------- ---------- ----GACACC CAG-GGGGAA GC-GAAGACC CTATG-GAGC TTT-ACT-GC AGGCTGTCGC T-----GAGA CGTG-GTCGC
Halococcus.morrh ---------- ---------- ----GACCCC CAA-GGGGAA GC-GAAGACC CTATA-GAGC TTT-ACT-GC AAGCTGTCGC T-----GGGA CACG-GTCGC
Natronobac.magad ---------- ---------- ----GACCCC CAA-GGGGAA GC-GAAGACC CTATA-GAGC TTT-ACT-GC AGGCTGTCAC T-----GAGA CGTG-GTCGC
Methanococ.vanni ---------- ---------- ----GACTTC CAG-TGGGAA GC-GAAGACC CCGTG-GAGC TTT-ACT-GC AGCCTGTCGT T-----GGGG CATG-GTTGT
Methanococ.janna ---------- ---------- ----GACCCC CAG-TGGGAA GC-GAAGACC CCGTG-GAGC TTT-ACT-GC AGCCTGTCGT T-----GGGG CATG-GCCGT
Xenopus.laevi ---------- ---------- ----CGGAAT CAG-CGGGGA AA-GAAGACC CTGTT-GAGC TTG-ACT-CT AGTCTGCAAC T-----GTGA AGAG-ACATG
Homo.sapie ---------- ---------- ----CGGAAT CAG-CGGGGA AA-GAAGACC CTGTT-GAGC TTG-ACT-CT AGTCTGGCAC G-----GTGA AGAG-ACATG
Candida.albic ---------- ---------- ----CAGAAT CAG-CGGGGA AA-GAAGACC CTGTT-GAGC TTG-ACT-CT AGTTTGACAT T-----GTGA AAAG-ACATG
Saccharomy.cerev ---------- ---------- ----CAGAAT CAG-CGGGGA AA-GAAGACC CTGTT-GAGC TTG-ACT-CT AGTTTGACAT T-----GTGA AGAG-ACATA
Schizosacc.pombe ---------- ---------- ----CAAAAT CAG-CGGGGA AA-GAAGACC CTGTT-GAGC TTG-ACT-CT AGTTTGACAT T-----GTGA AGAG-ACATA
Oryza.sativ ---------- ---------- ----CGGAAT CAG-CGGGGA AA-GAAGACC CTGTT-GAGC TTG-ACT-CT AGTCCGACTT T-----GTGA AATG-ACTTG
Arabidopsi.thali ---------- ---------- ----CAGAAT CAG-CGGGGA AA-GAAGACC CTGTT-GAGC TTG-ACT-CT AGTCCGACTT T-----GTGA AATG-ACTTG
Fragaria.anana ---------- ---------- ----CAGAAT CAG-CGGGGA AA-GAAGACC CTGTT-GAGC TTG-ACT-CT AGTCCGACTT T-----GTGA AATG-ACTTG
Chlorella.ellip ---------- ---------- ----AAGAAA CAG-CGGGGA AA-GAAGACC CTGTT-GAGC TTG-ACT-CT AGTCCGACTT T-----GTGA AATG-ACTTA
nEuglena.graci ---------- ---------- ----ATGTGT CAG-CGGGGA AA-GAAGACC CTGTT-GAGT TTG-ACT-CT AGTTTGATAC T-----GTGC AACA-ACATG
Entamoeba.histo ---------- ---------- ----TTGGAA CGG-CGGGGA AA-GAAGACC CTGTT-GAGC TTG-ACT-CT AATTTATCAT ------GTGA AATC-GATTT
nTrypanosom.bruce ---------- ---------- ----AGGGCT AAG-CGGGGA AA-GAAGACC CTGTT-GAGT TTG-ACT-CC AGTCTGGCTC T-----GTGC GGCG-ACTTT
Giardia.intes ---------- ---------- ----GCCGGC CAG-CGGGGC AA-GAAGACC CTTTT-GAGC TTG-ACT-CC AGCCCGGGCC T-----GTGG GGCG-GGGCG
********************************************************
6701
Mycobacter.lepra GTTTGTGT-- AGGATAGGTG GGAGACTGTG AA---ACTT- CGAC------ ---------- -GCTA----- -------GTT G-GGGTGGAG TCGT-TGT-T
Streptomyc.grise GCTTGTGT-- AGGATAGGTG GGAGACTTTG AA---GCGG- CCAC------ ---------- -GCCA----- -------GTG G-TTGTGGAG TCGT-CGT-T
Bacillus.subti GCTTGTAC-- AGGATAGGTA GGAGCCTTGG AA---ACCG- GAGC------ ---------- -GCCA----- -------GCT T-TGGTGGAG GCAT-CGG-T
Lactobacil.delbr GCATGTAC-- AGGATAGGTA GGAGCCGGAG AA---GATA- GGAC------ ---------- -GCCA----- -------GTC T-TATCTGAG GCGC-TGT-T
Leuconosto.mesen GCTTGTAC-- AGAATAGGTA GGAGACGTAG AA---GATT- GGAC------ ---------- -GCTA----- -------GTC T-AGTCGGAG TCGCACGG-T
Staphyloco.aureu GCTTGTAC-- AGGATAGGTA GGAGCCTTTG AA---ACGT- GAGC------ ---------- -GCTA----- -------GCT T-ACGTGGAG GCGC-TGG-T
Bartonella.bacil GCATGTGT-- AGGATAGGTG GTAGACTTTG AA---GCAG- GGGC------ ---------- -GCTA----- -------GCC C-TTGTGGAG TCAT-CCT-T
Rhodopseud.palus GTTTGTGT-- AGAATAGGTG GTAGGCTTTG AA---GCTC- GGGC------ ---------- -GCCA----- -------GCT C-GGGTGGAG CCGC-AATGT
Rickettsia.ricke AGATGTGC-- AGGATAGGTG GGAGACTACG AA---GCGA- AGGC------ ---------- -GTCA----- -------GCC T-TTGTGGAG TCAC-CCT-T
Bordetella.bronc GCCTGTGT-- AGGATAGGTG GGAGGCGCAG AA---CTCG- AGTC------ ---------- -GCCA----- -------GAT T-CGAGGGAG CCAT-CCT-T
Escherichi.coli TGATGTGT-- AGGATAGGTG GGAGGCTTTG AA---GTGT- GGAC------ ---------- -GCCA----- -------GTC T-GCATGGAG CCGA-CCT-T
Haemophilu.influ TGATGTGT-- AGGATAGGTG GGAGCCTTTG AA---GCAG- TGAC------ ---------- -GCCA----- -------GTC A-TTGTGGAG GCGA-CCT-T
Thermus.therm GCCTGCGT-- AGGATAGGTG GGAGCCTGTG AA---CCCC- CGCC------ ---------- -TCCG----- -------GGT G-GGGGGGAG GCGC-CGG-T
Thermotoga.marit TCGTGTAT-- AGCATAGGTG GGAGGCTGTG AA---GCCG- CCTC------ ---------- -GCCA----- -------GGG G-CGGTGGAG CCGC-CAG-T
Zea.mays.CP TCCTGCGC-- AGCTTAGGTG GAAGGCGAAG AA---GGCC- CCCT------ ---------- -TCCG----- -------GGG G-GGCC-GAG CCAT-CAG-T
nChlamydomo.reinh.CP TCTTGCGC-- AGCCTAGGTG GGAGGCTATG AA---GATT- ACCT------ ---------- -TCCG----- -------GGG T-AATTAGAG CCGT-CAT-T
Euglena.graci.CP TTTTGCGC-- AGAATAGGTG AGAGGCTATG AT---CTTG- TCTT------ ---------- -TTGG----- -------GAT A-CGGG-GAG CCGA-AAAAT
Desulfuroc.mobil CGGCGCGT-- AGCGTAGGTG GGAGCCTGTG AT---GCCG- TGCC------ ---------- -TTCG----- -------GGC A-CGGTGGAG GCGG-CAA-T
Sulfolobus.acido TTATGCGT-- AGAGTAGGTG GGAGGGGTCG AA---CCTTG GTTT------ ---------- ---CG----- -------GGG G-CAGGGGAC CCGA-AAG-T
Thermofilu.pende GGGTGCGT-- AGCGTAGGCG GGAGCAAT-G AA---CCT-G GCCC------ ---------- -TCCG----- -------GGG T-CAGGGGAT GCGG-CCA-T
Thermoprot.tenax GGGTGCAG-- AGCGTAGGCA GGAGCAAT-G AA---ACG-G GGTC------ ---------- -TCCG----- -------GGC C-CCGTGGAT GCGG-TCC-T
Halobacter.halob TGATGTGC-- AGAGTAGGTA GGAGACGTTA CAC-AGGTAC GTGC------ ---------- -GCTA----- -------GCA CGCCACCGAG TCAC-ACA-T
Halobacter.maris CGATGTGC-- AGCATAGGTA GGAGTCGTTA CAG-AGGTAC CCGC------ ---------- -GCTA----- -------GCG GGCCACCCAG ACAA-CAG-T
Halococcus.morrh TAGTGTGC-- AGGATAGGTA GGAGTCGTCA CGC-AGGCAC CCGC------ ---------- -GCTA----- -------GCG GGCCGCCGAG ACAC-CAC-T
Natronobac.magad CATTGTGC-- AGCATAGGTA GGAGGCATTA CAC-AGGTAC CCGC------ ---------- -GCTA----- -------GCG GGCCACCGAG CCAG-CAT-T
Methanococ.vanni GAGTGTAC-- AGTGTAGGTG GGAGCCATCG AA---ACCT- TTTC------ ---------- -GCCA----- -------GGA A-AGGTGGAG GCGA-TCC-T
Methanococ.janna GGGTGCAC-- AGCGTAGGTG GGAGCCGTCG AA---GCCA- CCCC------ ---------- -TCCG----- -------GGG G-TGGTGGAG GCGC-CCA-T
Xenopus.laevi AGAGGTGT-- AGGATAAGTG GGAGGCCCCC GCG------- ---------- ---------- -CTCGT---- --------CG CAAAGGGGCG CCGC-CGG-T
Homo.sapie AGAGGTGT-- AGAATAAGTG GGAGGCCCCC GGCGCCCCCC CGGTGTC--C CCGCGAGGGG C-CCGGGGCG GGGTC-CGCG GCCCTGCGGG CCGC-CGG-T
Candida.albic GAGGGTGT-- AGAATAAGTG GGAGC----- ---------- ---------- ---------- -TTCG----- ---------- ---------- GCGC-CGG-T
Saccharomy.cerev GAGGGTGT-- AGAATAAGTG GGAGC----- ---------- ---------- ---------- -TTCG----- ---------- ---------- GCGC-CAG-T
Schizosacc.pombe GAGGGTGT-- AGGATAAGTG GGAGTATGT- ---------- ---------- ---------- -TTCG----- ---------- ------GCAT ACGC-CGG-T
Oryza.sativ AGAGGTGT-- AGGATAAGTG GGAGCC---- ---------- ---------- ---------- -CTCG----- ---------- ---------G GCGC-AAG-T
Arabidopsi.thali AGAGGTGT-- AGGATAAGTG GGAGC----- ---------- ---------- ---------- -TTCG----- ---------- ---------- GCGC-AAG-T
Fragaria.anana AGAGGTGT-- AGTATAAGTG GGACT----- ---------- ---------- ---------- --CAC----- ---------- ---------G GCGCGAAG-T
Chlorella.ellip CGAGGTGT-- AGAATAAGTG GGAGC----- ---------- ---------- ---------- -TTCG----- ---------- ---------- GCGC-CGG-T
nEuglena.graci TGGGGCGT-- AGCATAGGTG GGAGGTGAGT GC-------- ---------- ---------- --CAG----- ---------- ---GTGCGAG CCTG-CAG-T
Entamoeba.histo TTTGGTAT-- AGGCTAGGTG GGAGAC---- ---------- ---------- ---------- --TTT----- ---------- ---------G TCAA-ACG-T
nTrypanosom.bruce GGAGGTGT-- AGTATAGGTG GAAGC----- ---------- ---------- ---------- -GCAA----- ---------- ---------- GCTC-AAA-T
Giardia.intes GCCGGCGC-- AGCGCACAGG GGAGGC---- ---------- ---------- ---------- --CGC----- ---------- ---------G CC---CC--T
********************** *
6801
Mycobacter.lepra GAAATACCAC TCTGATTGT- ATT-GAACAT CTAA-CCTCG AACCG----- ---------- ---------- ---------- ---------- ----------
Streptomyc.grise GAAATACCAC TCTGGTCGT- GCT-GGATGT CTAA-CCTGG GTCCG----- ---------- ---------- ---------- ---------- ----------
Bacillus.subti GGGATACTAC CCTGGCTGT- ATT-GACCTT CTAA-CCCGC CGCCC----- ---------- ---------- ---------- ---------- ----------
Lactobacil.delbr GGGATACTAC CCTTGCTTG- ACG-GATGCT CTAA-CTCAG GCCTG----- ---------- ---------- ---------- ---------- ----------
Leuconosto.mesen GGGATACTAC CCTCGTTGT- ATG-AACATT CTAA-CACTG GTCAC----- ---------- ---------- ---------- ---------- ----------
Staphyloco.aureu GGGATACTAC CCTAGCTGT- GTT-GGCTTT CTAA-CCCGC ACCAC----- ---------- ---------- ---------- ---------- ----------
Bartonella.bacil GAAATACCAC CCTTACCGA- CAT-GGATGT CTAA-CTGCA GTCCG----- ---------- ---------- ---------- ---------- ----------
Rhodopseud.palus GAAATACCAC CCTAATGGT- TAT-GGATAT CTAA-CCGCG ATCCC----- ---------- ---------- ---------- ---------- ----------
Rickettsia.ricke GAGATACCAC CCTTTTGGT- GCT-TGACAT CTAA-CCGAG GTCCT----- ---------- ---------- ---------- ---------- ----------
Bordetella.bronc GAAATACCAC CCTGGTTTG- TTT-GCGGTT CTAA-CCTTG GTCCG----- ---------- ---------- ---------- ---------- ----------
Escherichi.coli GAAATACCAC CCTTTAATG- TTT-GATGTT CTAA-CGTTG ACCCG----- ---------- ---------- ---------- ---------- ----------
Haemophilu.influ GAAATACCAC CCTTTAACG- TTT-GATGTT CTAA-CGAAG ATGAC----- ---------- ---------- ---------- ---------- ----------
Thermus.therm GAAATACCAC CCTGGCGCG- GCT-GGGGGC CTAA-CCCTC ---------- ---------- ---------- ---------- ---------- ----------
Thermotoga.marit GGAATACCAC CCTCGGTGC- ACT-GGAGTC CTAA-CCTGA CCCTGT---- ---------- ---------- ---------- ---------- ----------
Zea.mays.CP GAGATACCAC TCTGGAAGA- GCTCAGGATT CTAA-CCTTG TGTCA----- ---------- ---------- ---------- ---------- ----------
nChlamydomo.reinh.CP GAGAGACCAC TCTGGAAGA- GCT-AGAATC CTAA-TGGGG ATCCT----- ---------- ---------- ---------- ---------- ----------
Euglena.graci.CP GAGATACCAC TCTGAGAAA- GCT-AGAAAT CTAA-TCTTA ATCTTATG-- ---------- ---------- ---------- ---------- ----------
Desulfuroc.mobil GAAACACCAC CCACCGTGA- CCT-GGATGC CTTA-CTC-C CGG------- ---------- ---------- ---------- ---------- ----------
Sulfolobus.acido GAAACACCAC CCATGGACG- CTC-GAGGGA CTAA-CCT-C TC-------- ---------- ---------- ---------- ---------- ----------
Thermofilu.pende GAAACACCGC TCACCTGCG- GCT-GTGTCC CTAA-CCC-C GGG------- ---------- ---------- ---------- ---------- ----------
Thermoprot.tenax GGAACACTGC CCACTCTCC- GCC-CCTGCG CTAA-CCC-G GG-------- ---------- ---------- ---------- ---------- ----------
Halobacter.halob GAAACACTAC CCGTCAGTG- ACT-GTGACC CTCA-CTC-C ---------- ---------- ---------- ---------- ---------- ----------
Halobacter.maris GAAATACTAC CCGTCGGTG- ACT-GCGACT CTCA-CTC-C ---------- ---------- ---------- ---------- ---------- ----------
Halococcus.morrh GAAATACTAC CCACTAGTG- ACT-GTGACC CTTA-CTC-C ---------- ---------- ---------- ---------- ---------- ----------
Natronobac.magad GAAATACTAC CCGATGGTG- ACT-GCGACT CTCA-CTCC- ---------- ---------- ---------- ---------- ---------- ----------
Methanococ.vanni GGGACACCAC CCTCTCATG- ACC-ATGTTC CTCA-CCC-T ---------- ---------- ---------- ---------- ---------- ----------
Methanococ.janna GGGACACCAC CCACCCATG- GCC-ATGTCC CTAA-CCC-C ---------- ---------- ---------- ---------- ---------- ----------
Xenopus.laevi GAAATACCAC TACTCTTATC GTT-TTTTCA CTTA-CCCGG T------GAG GCGGGGGGG- ---CGAGCCC --CGAG--GG GCTC------ ----------
Homo.sapie GAAATACCAC TACTCTGATC GTT-TTTTCA CTGA-CCCGG T------GAG GCGGGGGGG- ---CGAGCCC ---GAG--GG GCTC------ ----------
Candida.albic GAAATACCAC TACCTCTATA GTT-TTTTTA CTTA-TTCAA T------GAA GCGGAGC--- ----TGGAGG --TCAA--AC TCCA------ ----------
Saccharomy.cerev GAAATACCAC TACCTTTATA GTT-TCTTTA CTTA-TTCAA T------GAA GCGGAGC--- ----TGGAAT --TCAT--TT TCCA------ ----------
Schizosacc.pombe GAAATACCAC TACCTTTATC GTT-TCTTTA CTTA-ATCAA T------GAA GCGGAAT--- ----TGGGAT --TTAT--TT CCCA------ ----------
Oryza.sativ GAAATACCAC TACTTTTAAC GTT-ATTTTA CTTA-TTCCG T------GAG TCGGAAGC-- ----GGGGC- ---CTA---G CCCC------ ----------
Arabidopsi.thali GAAATACCAC TACTTTTAAC GTT-ATTTTA CTTA-CTCCG T------GAA TCGGAGGCC- ----GGGGT- ---ACA---A CCCC------ ----------
Fragaria.anana GAAATACCAC TACTTTTAAC GTT-ATTTTA CTTA-TTCCG T------GAA TCGGA-GC-- ----GGGGC- ---ACT---G CCCC------ ----------
Chlorella.ellip GAAATACCAC TACTTGTAAC GTT-ATTTTA CTTA-TTCCA T------TAG TTGGAAGC-- ----GGGAC- ---TCG---G TCCC------ ----------
nEuglena.graci GAAATACCAC TACCTTCACC GTT-GTTTTA CTCA-TCGAG T------TGC AA-GAGA--- ---GCGGTGG CCATTTGGAC ATCG------ ----------
Entamoeba.histo GTAATACCAC CACTAGAAAT ACT-ATTTCA CTCA-TTTCG T------TAA ATGTTAA--- ----AATGG- --ATTTT--C CATT------ ----------
nTrypanosom.bruce GAAATACCAC CACTCGGAAC GTT-GCTTCA CTTA-TCGAA T------GAA GAGACCAATG GTTGTTTTGC GCAGTCTTCG GGCTGTGCGC CGTCTAGGCT
Giardia.intes GAGACACCCT GACGGCCGCC GCC-GCCCCG CTCA-CCCG- ---------- ---------- ---------- ---------- ---------- ----------
************
6901
Mycobacter.lepra ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Streptomyc.grise ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Bacillus.subti ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Lactobacil.delbr ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Leuconosto.mesen ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Staphyloco.aureu ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Bartonella.bacil ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Rhodopseud.palus ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Rickettsia.ricke ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Bordetella.bronc ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Escherichi.coli ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Haemophilu.influ ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Thermus.therm ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Thermotoga.marit ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Zea.mays.CP ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
nChlamydomo.reinh.CP ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Euglena.graci.CP ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Desulfuroc.mobil ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Sulfolobus.acido ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Thermofilu.pende ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Thermoprot.tenax ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Halobacter.halob ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Halobacter.maris ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Halococcus.morrh ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Natronobac.magad ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Methanococ.vanni ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Methanococ.janna ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Xenopus.laevi ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Homo.sapie ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Candida.albic ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Saccharomy.cerev ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Schizosacc.pombe ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Oryza.sativ ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Arabidopsi.thali ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Fragaria.anana ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Chlorella.ellip ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
nEuglena.graci ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Entamoeba.histo ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
nTrypanosom.bruce -GGGCATAAT TGT--GGTGT TTCTTT---- ---------- ---------- ------CACC GCCACGGGA- GGGGTGTTGG TTTTTTATCC TCCTCTCCGT
Giardia.intes ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
7001
Mycobacter.lepra ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Streptomyc.grise ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Bacillus.subti ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Lactobacil.delbr ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Leuconosto.mesen ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Staphyloco.aureu ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Bartonella.bacil ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Rhodopseud.palus ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Rickettsia.ricke ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Bordetella.bronc ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Escherichi.coli ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Haemophilu.influ ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Thermus.therm ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Thermotoga.marit ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Zea.mays.CP ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
nChlamydomo.reinh.CP ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Euglena.graci.CP ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Desulfuroc.mobil ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Sulfolobus.acido ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Thermofilu.pende ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Thermoprot.tenax ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Halobacter.halob ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Halobacter.maris ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Halococcus.morrh ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Natronobac.magad ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Methanococ.vanni ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Methanococ.janna ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Xenopus.laevi ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------T
Homo.sapie ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------T
Candida.albic ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Saccharomy.cerev ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Schizosacc.pombe ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Oryza.sativ ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Arabidopsi.thali ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Fragaria.anana ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Chlorella.ellip ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
nEuglena.graci ---------- ---------- ---------- -------ACC CTGCCCTTGT GGTGGGATCG TGGCTTTCCC CGATTCATGC ACCAAGTCTG CAGCAGTCTC
Entamoeba.histo ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
nTrypanosom.bruce TTCTCCT--- ---------- ---------- -----TTTCT CTCTTTCTCC CTTTTTTTGG GCGTTTGAGG GTTGGTGACC CGT-GGGCGC CCAGCCGTGC
Giardia.intes ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
7101
Mycobacter.lepra ---------- ---------- ---------- ---TA-TATC ---------- ----CGGTTT AGGGACAG-- TGCCTGGCGG GTAGTTTAAC TGGGGCGGTT
Streptomyc.grise ---------- ---------- ---------- ----T-GATC ---------- ----CGGATC AGGGACAG-- TGTCTGATGG GTAGTTTAAC TGGGGCGGTT
Bacillus.subti ---------- ---------- ---------- ----T-TATC ---------- ----GGGCGG GGAGACAG-- TGTCAGGTGG GCAGTTTGAC TGGGGCGGTC
Lactobacil.delbr ---------- ---------- ---------- ----T-GATC ---------- ----CAGGCC GAGGACAG-- TGTTTGACGG GCAGTTTGAC TGGGGCGGTC
Leuconosto.mesen ---------- ---------- ---------- ----T-CAAC ---------- ----GTGATC GTGGACAG-- TGTCTGGCGG GCAGTTTGAC TGGGGCGGTC
Staphyloco.aureu ---------- ---------- ---------- ----T-TATC ---------- ----GTGGTG GGAGACAG-- TGTCAGGCGG GCAGTTTGAC TGGGGCGGTC
Bartonella.bacil ---------- ---------- ---------- ----T-TATC ---------- ----CGGATT CAAGACAG-- TGTATGGTGG GTAGTTTGAC TGGGGCGGTC
Rhodopseud.palus ---------- ---------- ---------- ----T-TATC ---------- ----GGGTTC CGGGACAG-- CGCATGGTGG GCAGTTTGAC TGGGGCGGTC
Rickettsia.ricke ---------- ---------- ---------- ----T-GAAT C--------- ----AGGATC CGAGACAA-- TGCATGGTGG GTAGTTTGAC TGGGGCGGTC
Bordetella.bronc ---------- ---------- ---------- ----T-TATC ---------- ----CGGATC GGGGACAG-- TGCATGGTAG GCAGTTTGAC TGGGGCGGTC
Escherichi.coli ---------- ---------- ---------- ----T-AATC ---------- ----CGGGTT GCGGACAG-- TGTCTGGTGG GTAGTTTGAC TGGGGCGGTC
Haemophilu.influ ---------- ---------- ---------- ----G-AAAC ---------- ----GTGGTC TCGGACAG-- TGTCTGGTGG GTAGTTTGAC TGGGGCGGTC
Thermus.therm ---------- ---------- ---------- ----G-GAT- ---------- --------GG GGGGACAG-- CGCTTGGCGG GCAGTTTGAC TGGGGCGGTC
Thermotoga.marit ---------- ---------- ---------- ----G-AAGA ---------- ---GCAGGGT GGGGACAG-- TGCCAGGTGG GCAGTTTGAC TGGGGCGGTC
Zea.mays.CP ---------- ---------- ---------- ---GA-CCCG ---------- ---CGGGCCA AGGGACAG-- TCTCAGGTAG ACAGTTTCTA TGGGGCGTAG
nChlamydomo.reinh.CP ---------- ---------- ---------- ---TG-AAT- ---------- ---CAGGACC CTTGACAG-- TTTCAGGTGG GCAGTTTATT TGGGGCGAAT
Euglena.graci.CP ---------- ---------- ---------- --TAC-AAT- ---------- ---CATGATA ATTGACAG-- TTTCAGGTGG GCAGTTTTAC TGGGGCGGTA
Desulfuroc.mobil ---------- ---------- ---------- ------GTAG ---------- ------CCGG GAGGACAA-- CGCCAGGTGG GCGGTTCGGC TGGGGCGGCA
Sulfolobus.acido ---------- ---------- ---------- ------GAAA ---------- -------GAG AGGAACAA-- CGTCAGGTGG GCGGTTCGGC TGGGGCGGCA
Thermofilu.pende ---------- ---------- ---------- ------GTTT ---------- ------CCCG GGGGACAG-- CGCCAGGTGG GCTGTTCGGC TGGGGCGGCA
Thermoprot.tenax ---------- ---------- ---------- ------GCAA ---------- -------CCC GGGGACAG-- CGGCAGGCGG GCAGTTCGGC TGGGGCGGCA
Halobacter.halob ---------- ---------- ---------- ------GGGA ---------- ---------G GAGGACAC-- CGGTAGCCGG GCAGTTTGAC TGGGGCGGTA
Halobacter.maris ---------- ---------- ---------- ------GGGA ---------- ---------G GAGGACAC-- CGATAGCCGG GCAGTTTGAC TGGGGCGGTA
Halococcus.morrh ---------- ---------- ---------- ------GGGA ---------- ---------G GAGGACAC-- CGGTAGCTGG GCAGTTTGAC TGGGGCGGTA
Natronobac.magad ---------- ---------- ---------- ------TGGC ---------- ---------G GAGGACAC-- TGGTAGCCGG GCAGTTTGAC TGGGGCGGTA
Methanococ.vanni ---------- ---------- ---------- -------TTT ---------- ---------A GGGGACAC-- CGGTAGGTGG GCAGTTTGGC TGGGGCGGTA
Methanococ.janna ---------- ---------- ---------- -------GTA ---------- -------AAG GGGGACAC-- CGGCAGGTGG GCAGTTTGGC TGGGGCGGCA
Xenopus.laevi CGCTTCTGGA CCC-AA-GCG CCCGGC---- CCCCG-C-GC CGGGCGCGAC CCGCT--CCG AG-GACAG-- TGGCAGGTGG GGAGTTTGAC TGGGGCGGTA
Homo.sapie CGCTTCTGGC GCC-AA-GCG CCCG------ CCCGG-C--- CGGGCGCGAC CCGCT--CCG GG-GACAG-- TGCCAGGTGG GGAGTTTGAC TGGGGCGGTA
Candida.albic -CGTTCTAGC ATT-AA--GC CC-------- --TCT----- --GGGC-GAT CCGGG--TTG AA-GACAT-- TGTCAGGTGG GGAGTTTGGC TGGGGCGGCA
Saccharomy.cerev -CGTTCTAGC ATTCAA-GGT CCC------- -ATTC----- -GGGGCTGAT CCGGG--TTG AA-GACAT-- TGTCAGGTGG GGAGTTTGGC TGGGGCGGCA
Schizosacc.pombe -TATTCTAGC GTT-AA-AGT TT-------- -CTTC----- GCGAACTGAT CCGCG--TTG AT-GACAT-- TGTCAGGTGG GGAGTTTGGC TGGGGCGGCA
Oryza.sativ CTCCTTTTGG CTCTAA-GGC CCGAG----- -TCC-----C TCGGGCCGAT CCGGG--CGG AA-GACAT-- TGTCAGGTGG GGAGTTTGGC TGGGGCGGCA
Arabidopsi.thali -TGTTTTTGG TCCCAA-GGC TCGC------ -TTCG----- GCGGGTCGAT CCGGG--CGG AG-GACAT-- TGTCAGGTGG GGAGTTTGGC TGGGGCGGCA
Fragaria.anana -TCTTTTTGG ACCCAAACGT -CGC------ -TTCG----- GCGGGCTGAT CCGGG--CGG AA-GACAT-- TGTCAGGTGG GGAGTTTGGC TGGGGCGGCA
Chlorella.ellip -TCTTTCTAG CTTTAA-GGC GGCC------ -CTCG----G GCACGCCGAT CCAGG--TGG AA-GACAT-- TGTCAGGTGG GGAGTTTGGC TGGGGCGGCA
nEuglena.graci TGTTGTGGAC GACTCT-GGA CGTG------ ---TC----- ACAGTCCGAT CAGCAGTCTC GA-AACAT-C GATCAGTTGG GGAGTTTGGC TGGGGCGGCA
Entamoeba.histo ---AATTTAA AAACATTAAA AC-------- -TTCG----- ----GTTGAA ACAGG--CGA TT-GAAAG-- AGATAGACGG GGAGTTTGGC TGGGGCGGCA
nTrypanosom.bruce GGAACTACTG CGCCAA-CGG GGTGGGAACT TTTCG-TTTC TTCTCCGGAG TCTTG-TTTC GA-GACAT-C TGCCAGATGG GGAGTTTGGC TGGGGCGGCA
Giardia.intes ----GTCGCG ---------- ---------- ---------- ---------- --------CG GG-GACCC-- GCCCGGGCGG GGAGTTCGGC TGGGGCGGCG
****************************************
7201
Mycobacter.lepra GCCTCCT-AA AATGTAACGG A-GGCGC-CC AA-------- ---------- ---------- ---------- ---------- ---------- ----------
Streptomyc.grise GCCTCCT-AA AGAGTAACGG A-GGCGC-CC AA-------- ---------- ---------- ---------- ---------- ---------- ----------
Bacillus.subti GCCTCCT-AA AAGGTAACGG A-GGCGC-CC AA-------- ---------- ---------- ---------- ---------- ---------- ----------
Lactobacil.delbr GCCTCCT-AA AGTGTAACGG A-GGCGC-CC AA-------- ---------- ---------- ---------- ---------- ---------- ----------
Leuconosto.mesen GCCTCCT-AA AAGGTAACGG A-GGCGC-TC AA-------- ---------- ---------- ---------- ---------- ---------- ----------
Staphyloco.aureu GCCTCCT-AA AAGGTAACGG A-GGCGC-TC AA-------- ---------- ---------- ---------- ---------- ---------- ----------
Bartonella.bacil GCCTCCT-AA AGAGTAACGG A-GGCGC-GC GA-------- ---------- ---------- ---------- ---------- ---------- ----------
Rhodopseud.palus GCCTCCC-AA AGAGTAACGG A-GGCGT-GC GA-------- ---------- ---------- ---------- ---------- ---------- ----------
Rickettsia.ricke GCCTCCC-AA AGAGTAACGG A-GGCGC-GC GA-------- ---------- ---------- ---------- ---------- ---------- ----------
Bordetella.bronc TCCTCCC-AA AGCGTAACGG A-GGAGT-TC GA-------- ---------- ---------- ---------- ---------- ---------- ----------
Escherichi.coli TCCTCCT-AA AGAGTAACGG A-GGAGC-AC GA-------- ---------- ---------- ---------- ---------- ---------- ----------
Haemophilu.influ TCCTCCC-AA AGCGTAACGG A-GGAGC-AC GA-------- ---------- ---------- ---------- ---------- ---------- ----------
Thermus.therm GCCTCCT-AA AAGGTAACGG A-GGCGC-CC AA-------- ---------- ---------- ---------- ---------- ---------- ----------
Thermotoga.marit ACCTCCT-AA AAGGTAACGG A-GGTGT-GC AA-------- ---------- ---------- ---------- ---------- ---------- ----------
Zea.mays.CP GCCTCCC-AA AAGGTAACGG A-GGCGT-GC AA-------- ---------- ---------- ---------- ---------- ---------- ----------
nChlamydomo.reinh.CP GCCTCCT-AA AAGGTAACGG A-GGCGT-GC AA-------- ---------- ---------- ---------- ---------- ---------- ----------
Euglena.graci.CP GCCTCCT-AA AAAGTAACGG A-GGCGT-AC AA-------- ---------- ---------- ---------- ---------- ---------- ----------
Desulfuroc.mobil CGCCCGCGAA AAGATAACAC G-GGCGC-CC AA-------- ---------- ---------- ---------- ---------- ---------- ----------
Sulfolobus.acido CTCCCGCGAA AAGATAACAC G-GGAGC-CC AA-------- ---------- ---------- ---------- ---------- ---------- ----------
Thermofilu.pende CACCCCTGAG AAGGTATCAG G-GGTGC-CC AA-------- ---------- ---------- ---------- ---------- ---------- ----------
Thermoprot.tenax CACCCCTGAA AAGATATCGG G-GGTGC-CC AA-------- ---------- ---------- ---------- ---------- ---------- ----------
Halobacter.halob CGCGCTTGAA AAGATATCGA G-CGCGC-CC TA-------- ---------- ---------- ---------- ---------- ---------- ----------
Halobacter.maris CGCGCTCGAA AAGATATCGA G-CGCGC-CC TA-------- ---------- ---------- ---------- ---------- ---------- ----------
Halococcus.morrh CGGGCTTGAA AAGATATCGA G-CCCGC-CC GA-------- ---------- ---------- ---------- ---------- ---------- ----------
Natronobac.magad CGCGCCTGAA AAGATATCGG G-CGCGC-CC CA-------- ---------- ---------- ---------- ---------- ---------- ----------
Methanococ.vanni CCCTCCTAAA AATGCATCAG G-AGGGC-CC AA-------- ---------- ---------- ---------- ---------- ---------- ----------
Methanococ.janna CCCCCCTGAA AAGGCATCAG G-GGGGC-CC AA-------- ---------- ---------- ---------- ---------- ---------- ----------
Xenopus.laevi CACCTGTCAA ACCGTAACGC A-GGTGT-CC TA-------- ---------- ---------- ---------- ---------- ---------- ----------
Homo.sapie CACCTGTCAA ACGGTAACGC A-GGTGT-CC TA-------- ---------- ---------- ---------- ---------- ---------- ----------
Candida.albic CATCTGTTAA ACGATAACGC A-GGTGT-CC TA-------- ---------- ---------- ---------- ---------- ---------- ----------
Saccharomy.cerev CATCTGTTAA ACGATAACGC A-GATGT-CC TA-------- ---------- ---------- ---------- ---------- ---------- ----------
Schizosacc.pombe CATCTGTTAA AAGATAACGC A-GGTGT-CC TA-------- ---------- ---------- ---------- ---------- ---------- ----------
Oryza.sativ CATCTGTTAA AAGATAACGC AGGGTGT-CC TA-------- ---------- ---------- ---------- ---------- ---------- ----------
Arabidopsi.thali CATCTGTTAA AAGATAACGC A-GGTGT-CC TA-------- ---------- ---------- ---------- ---------- ---------- ----------
Fragaria.anana CATCTGTTAA AAGATAACGC A-GGTGT-CC TA-------- ---------- ---------- ---------- ---------- ---------- ----------
Chlorella.ellip CATCTGTTAA AAGATAACGC A-GGTGT-CC TA-------- ---------- ---------- ---------- ---------- ---------- ----------
nEuglena.graci CGCCTTTTAC AACACAACGA A-GGCGT-CC TGA------- ---------- ---------- ---------- ---------- ---------- ----------
Entamoeba.histo CATCTGTTAC AAGATAACGC A-GGTGT-CC AA-------- ---------- ---------- ---------- ---------- ---------- ----------
nTrypanosom.bruce TATCTGTTAC ACGACAACGC A-GGTGT-CC TA-------- ---------- ---------- ---------- ---------- ---------- ----------
Giardia.intes CGCCTGCTAC ACCGGACCGC A-GGCGT-CC CAC------- ---------- ---------- ---------- ---------- ---------- ----------
*****************************
7301
Mycobacter.lepra ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Streptomyc.grise ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Bacillus.subti ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Lactobacil.delbr ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Leuconosto.mesen ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Staphyloco.aureu ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Bartonella.bacil ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Rhodopseud.palus ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Rickettsia.ricke ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Bordetella.bronc ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Escherichi.coli ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Haemophilu.influ ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Thermus.therm ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Thermotoga.marit ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Zea.mays.CP ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
nChlamydomo.reinh.CP ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Euglena.graci.CP ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Desulfuroc.mobil ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Sulfolobus.acido ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Thermofilu.pende ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Thermoprot.tenax ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Halobacter.halob ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Halobacter.maris ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Halococcus.morrh ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Natronobac.magad ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Methanococ.vanni ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Methanococ.janna ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Xenopus.laevi ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Homo.sapie ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Candida.albic ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Saccharomy.cerev ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Schizosacc.pombe ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Oryza.sativ ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Arabidopsi.thali ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Fragaria.anana ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Chlorella.ellip ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
nEuglena.graci ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Entamoeba.histo ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
nTrypanosom.bruce ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Giardia.intes ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
7401
Mycobacter.lepra --AGGT-TCC CTCAAC-CTG G--------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Streptomyc.grise --AGGT-TCC CTCAGC-CTG G--------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Bacillus.subti --AGGT-TCC CTCAGA-ATG G--------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Lactobacil.delbr --AGGT-TCC CTCAGA-ATG G--------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Leuconosto.mesen --AGGT-TTG CTCAGA-ATG G--------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Staphyloco.aureu --AGGT-TCC CTCAGA-ATG G--------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Bartonella.bacil --AGGT-AGG CTCAGA-ACG G--------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Rhodopseud.palus --CGGT-AGG CTCAGA-ACG G--------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Rickettsia.ricke --TGGT-TAG CTCAGG-TTG G--------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Bordetella.bronc --AGGT-ACG CTAGGT-ACG G--------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Escherichi.coli --AGGT-TGG CTAATC-CTG G--------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Haemophilu.influ --AGGT-TTG CTAATC-ACG G--------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Thermus.therm --AGGT-CCC CTCAGG-CGG G--------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Thermotoga.marit --AGGT-CGG CTCAGG-TGG G--------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Zea.mays.CP --AGGT-TTC CTCGGG-CCA G--------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
nChlamydomo.reinh.CP --AGGT-TCC CTCAGT-CTG G--------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Euglena.graci.CP --AGGT-TTT CTCAGG-CTA G--------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Desulfuroc.mobil --AGGT-CGG CTCAGG-CGG G--------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Sulfolobus.acido --AGGT-CGG CTCAGG-CGG T--------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Thermofilu.pende --AGCT-CGG CTCAGG-CGG G--------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Thermoprot.tenax --AGCT-CGG CTCAGG-CGG G--------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Halobacter.halob --AGCC-TAT CTCAGC-CGA G--------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Halobacter.maris --TGGT-CAT CTCAGC-CGG G--------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Halococcus.morrh --AGAT-CAC CTCATC-CGG G--------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Natronobac.magad --AGAT-TTC CTCACC-CGC G--------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Methanococ.vanni --AGGT-TGG CTCAAG-CGG G--------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Methanococ.janna --AGGT-CGG CTCAGG-CGG G--------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Xenopus.laevi --AGGC-GAG CTCAGG-GAG G--------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Homo.sapie --AGGC-GAG CTCAGG-GAG G--------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Candida.albic --AGGG-GGA CTCATG-GAG A--------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Saccharomy.cerev --AGGG-GGG CTCATG-GAG A--------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Schizosacc.pombe --AGGG-GGA CTCATC-GAG A--------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Oryza.sativ --AGAT-GAG CTCAAC-GAG A--------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Arabidopsi.thali --AGAT-GAG CTCAAC-GAG A--------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Fragaria.anana --AGAT-GAG CTC----GAG A--------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Chlorella.ellip --AGATGGAG CTCAAC-GAG A--------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
nEuglena.graci --AGCA-TTG CTCAGG-CAG A--------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Entamoeba.histo --AGAT-GAA CTCAAT-GAG G--------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
nTrypanosom.bruce --AGGC-GAG CTCAGT-GGG A--------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Giardia.intes ---GGC-GGG CTCAGC-GAG G--------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
7501
Mycobacter.lepra ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Streptomyc.grise ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Bacillus.subti ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Lactobacil.delbr ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Leuconosto.mesen ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Staphyloco.aureu ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Bartonella.bacil ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Rhodopseud.palus ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Rickettsia.ricke ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Bordetella.bronc ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Escherichi.coli ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Haemophilu.influ ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Thermus.therm ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Thermotoga.marit ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Zea.mays.CP ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
nChlamydomo.reinh.CP ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Euglena.graci.CP ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Desulfuroc.mobil ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Sulfolobus.acido ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Thermofilu.pende ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Thermoprot.tenax ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Halobacter.halob ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Halobacter.maris ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Halococcus.morrh ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Natronobac.magad ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Methanococ.vanni ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Methanococ.janna ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Xenopus.laevi ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Homo.sapie ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Candida.albic ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Saccharomy.cerev ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Schizosacc.pombe ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Oryza.sativ ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Arabidopsi.thali ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Fragaria.anana ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Chlorella.ellip ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
nEuglena.graci ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Entamoeba.histo ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
nTrypanosom.bruce ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Giardia.intes ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
7601
Mycobacter.lepra ---------- ---------- ---------- ---------- -TCGGTAATC AGGT-GGCGA GTG-TAAATG CACAAG-GGG -GCTT-GACT GCG-AGACC-
Streptomyc.grise ---------- ---------- ---------- ---------- -TTGGCAATC AGGT-GTTGA GTG-TAAGTG CACAAG-GGA -GCTT-GACT GTG-AGACC-
Bacillus.subti ---------- ---------- ---------- ---------- -TTGGAAATC ATTC-GCAGA GTG-TAAAGG CACAAG-GGA -GCTT-GACT GCG-AGACC-
Lactobacil.delbr ---------- ---------- ---------- ---------- -TTGGAAATC ATTC-GCAGA GTG-TAAAGG TAAAAG-GGA -GCTT-GACT GCG-AGAGA-
Leuconosto.mesen ---------- ---------- ---------- ---------- -TTGGAAATC ATTC-GTAGC GTG-TAAAGG CATAAG-CAA -GCTT-GACT GCG-AGAGC-
Staphyloco.aureu ---------- ---------- ---------- ---------- -TTGGAAATC ATTC-ATAGA GTG-TAAAGG CATAAG-GGA -GCTT-GACT GCG-AGACC-
Bartonella.bacil ---------- ---------- ---------- ---------- -TCGGAAATC GTTT-GTTGA GTG-CAATGG CATAAG-CCT -GCCT-GACT GTG-AGACT-
Rhodopseud.palus ---------- ---------- ---------- ---------- -TCGGAAATC GTTC-GTCGA GTA-CAATGG CATAAG-CCT -GCCT-GACT GCG-AGACC-
Rickettsia.ricke ---------- ---------- ---------- ---------- -TCGGAAATC AACTTTTAGA GTG-CAATGG CATAAG-CTA -GCCT-GACT GCG-AGTCT-
Bordetella.bronc ---------- ---------- ---------- ---------- -TCGGAAATC GTGC-TGATA GTG-CAATGG CATAAG-CGT -GCTT-GACT GTG-AGACT-
Escherichi.coli ---------- ---------- ---------- ---------- -TCGGACATC AGGA-GGTTA GTG-CAATGG CATAAG-CCA -GCTT-GACT GCG-AGCGT-
Haemophilu.influ ---------- ---------- ---------- ---------- -TCGGACATC GTGA-GGTTA GTG-CAATGG TATAAG-CAA -GCTT-AACT GCG-AGACA-
Thermus.therm ---------- ---------- ---------- ---------- -ACGGAAATC CGCC-GGAGA GCG-CAAGGG TAGAAG-GGG -GCCT-GACT GCG-AGGCC-
Thermotoga.marit ---------- ---------- ---------- ---------- -TTGGAAATC CACC-GCAGA GTG-CAAGGG CATAAG-CCG -GCCT-GACT GCG-AGGCC-
Zea.mays.CP ---------- ---------- ---------- ---------- -ACGGACATT GGTC-CTCGA GTG-CAAAGG CAGAAG-GGA -GCTT-GACT GCA-AGACT-
nChlamydomo.reinh.CP ---------- ---------- ---------- ---------- -ACGGAAATC AGAC-ATTGA GTG-TAAAGG CAAAAG-GGA -GCTT-GACT GCA-AGACC-
Euglena.graci.CP ---------- ---------- ---------- ---------- -ACGGAAATT AGTT-GTGGA GTG-TAAAGG CATAAG-AAA -GCTT-GACT GTG-AGACT-
Desulfuroc.mobil ---------- ---------- ---------- ---------- -TCAGAGCTC CGCC-GTAGA GTG-CAAGGG CAAAAG-CCG -GCCT-GACC GGA-CCCTTG
Sulfolobus.acido ---------- ---------- ---------- ---------- -ACAGAACGC CGCC-GTAGA GCG-CAAGGG CAAAAG-CCG -GCCT-GACG TGA-CCCTTC
Thermofilu.pende ---------- ---------- ---------- ---------- -TCAGAACTC CGCC-GTAGA GGG-CAAGGC CAAAAG-CCG -GGCT-GACT GCG-CCCTTA
Thermoprot.tenax ---------- ---------- ---------- ---------- -TCAGAACTC CGCC-GTAGA GTG-TAAGGG CAAAAG-CCG -GGCT-GACT XCG-CCCTTG
Halobacter.halob ---------- ---------- ---------- ---------- -TCAGAGACT CGGC-GAAGA GTG-CAAGAG CATAAG-ATA -GGCT-GACA GTG-TCCTAC
Halobacter.maris ---------- ---------- ---------- ---------- -ACAGAGACC CGGC-GAAGA GTG-CAAGAG CAAAAG-ATG -ACTT-GACA GTG-TTCTTC
Halococcus.morrh ---------- ---------- ---------- ---------- -TCGGAGACC CGGA-ATAGA GCG-CAAGAG CAAAAG-GTG -GTCT-GACA GTG-TTCTCT
Natronobac.magad ---------- ---------- ---------- ---------- -TCGGAGACG CGGG-AAAGA GCG-CAAGAG CATACG-GAA -GTCT-GACA GTG-TCCGGC
Methanococ.vanni ---------- ---------- ---------- ---------- -TCAGGACTC CGCT-GTTGA GTG-TAAGGG CAAAAG-CCA -GCCT-GACT TTG-TTGCCA
Methanococ.janna ---------- ---------- ---------- ---------- -TCAGAACTC CGCC-GTGGA GTG-CAAGGG CAAAAG-CCG -GCCT-GACT TGG-TCGGTA
Xenopus.laevi ---------- ---------- ---------- ---------- -ACAGAAACC TCCC-GTGGA GCA-GAAGGG CAAAAG-CTC -GCTT-GATC TT--GATTTT
Homo.sapie ---------- ---------- ---------- ---------- -ACAGAAACC TCCC-GTGGA GCA-GAAGGG CAAAAG-CTC -GCTT-GATC TT--GATTTT
Candida.albic ---------- ---------- ---------- ---------- -ACAGAAATC TCCA-GTAGA ACA-AAAGGG TAAAAG-TCC -CCTT-GATT TT--GATTTT
Saccharomy.cerev ---------- ---------- ---------- ---------- -ACAGAAATC TCCA-GTAGA ACA-AAAGGG TAAA-G--CC -CCTT-AGTT T---GATT-T
Schizosacc.pombe ---------- ---------- ---------- ---------- -ACAGAAATC TCGA-GTAGA ATA-AAAGGG TAAAAG-TCC -CCTT-GATT TT--GATTTT
Oryza.sativ ---------- ---------- ---------- ---------- -ACAGAAATC TCGT-GTGGA ACA-AAAGGG TAAAAG-CTC -GTTT-GATT CT--GATTTC
Arabidopsi.thali ---------- ---------- ---------- ---------- -ACAGAAATC TCGT-GTGGA ACA-AAAGGG TAAAAG-CTC -GTTT-GATT CT--GATTTT
Fragaria.anana ---------- ---------- ---------- ---------- -ACAGAAATG T-GT-GTGGA ACA-AAAGGG -AAAAG-CTC -GTTT-GATT CT--GATTTC
Chlorella.ellip ---------- ---------- ---------- ---------- -ACAGAAATC TCGT-GTGGA ACA-AAAGGG TAAAAG-CTC -ATTT-GATT TT--GATTTT
nEuglena.graci ---------- ---------- ---------- ---------- -ACAGAAATC TCCC-AGGGA GGA-GAAGGC CAAAGG-TGC -TGCT-GATG CTGCGACTCT
Entamoeba.histo ---------- ---------- ---------- ---------- -ACAGAAACC TCAT-GTAGA ATA-TAAGGG TATAAG-TTC -ATTT-GATT AT--TGATTC
nTrypanosom.bruce ---------- ---------- ---------- ---------- -ACAGAAATC TCAC-GTGGA ACA-CAAGCG TAAATG-CTT -GCTT-GATT AAC-GATTTC
Giardia.intes ---------- ---------- ---------- ---------- -ACGGAGACC TCCC-GCGGA GCA-GAAGGG CACAAG-CCC -GCCC-GACC CG--CGCCCC
************************************* *********
7701
Mycobacter.lepra --TACA---- ---------- ---------- ---------- -------CGT CAA-GCAGGG AC-GAAA-GT -CGGGATT-A GTGATCCGGC ACC-------
Streptomyc.grise --GACG---- ---------- ---------- ---------- -------GGT CGA-GCAGGG AC-GAAA-GT -CGGGACT-A GTGATCCGGC AGT-------
Bacillus.subti --TACA---- ---------- ---------- ---------- -------AGT CGA-GCAGGG AC-GAAA-GT -CGGGCTT-A GTGATCCGGT GGT-------
Lactobacil.delbr --GACA---- ---------- ---------- ---------- -------ACT CGA-GCAGGT AC-GAAA-GT -AGGGCTT-A GTGATCTGGT GGT-------
Leuconosto.mesen --TACA---- ---------- ---------- ---------- -------ACT CGA-GCAGGT AC-GAAA-GT -AGGACTT-A GTGATCCGGT GGT-------
Staphyloco.aureu --TACA---- ---------- ---------- ---------- -------AGT CGA-GCAGGG TC-GAAA-GA -CGGACTT-A GTGATCCGGT GGT-------
Bartonella.bacil --GACA---- ---------- ---------- ---------- -------AGT CGA-GCAGAG TC-GAAA-GA -CGGTCAT-A GTGATCCGGT GGT-------
Rhodopseud.palus --AACA---- ---------- ---------- ---------- -------AGT CGA-GCAGAG AC-GAAA-GT -CGGTCAT-A GTGATCCGGT GGT-------
Rickettsia.ricke --GACA---- ---------- ---------- ---------- -------AAA CGA-GCAGAG AC-RAAA-GT -CGGTCAT-A GTGATCCGGT GGT-------
Bordetella.bronc --GACA---- ---------- ---------- ---------- --------GT -GA-ACAGGT GC-GAAC-G- --GGACAT-A GTGATCCGGT GGT-------
Escherichi.coli --GACG---- ---------- ---------- ---------- -------GCG CGA-GCAGGT GC-GAAA-GC -AGGTCAT-A GTGATCCGGT GGT-------
Haemophilu.influ --GACA---- ---------- ---------- ---------- -------AGT CGA-GCAGGT AC-GAAA-GT -AGGTCAT-A GTGATCCGGT GGT-------
Thermus.therm --TGCA---- ---------- ---------- ---------- -------AGC CGA-GCAGGG GC-GAAA-GC -CGGGCCT-A GTGAACCGGT GGT-------
Thermotoga.marit --GACA---- ---------- ---------- ---------- -------GGC CGA-GCAGGG GG-GAAA-CC -CGGCCCT-A GTGACCCGGC GGT-------
Zea.mays.CP --CACC---- ---------- ---------- ---------- -------CGT CGA-GCAGAG AC-GAAA-GT -CGGCCTT-A GTGATCCGAC GGT-------
nChlamydomo.reinh.CP --TACA---- ---------- ---------- ---------- -------AGT CGA-GCAGGG GC-GAAA-GC -CGGCCTT-A GTGATCCGAC GGT-------
Euglena.graci.CP --TATA---- ---------- ---------- ---------- -------AGT CAA-ACAGAG AC-TAAA-GT -CGGTCTT-A GTGACCCGAC GGT-------
Desulfuroc.mobil AACACA---- ---------- ---------- ---------- -------AGG GGT-CCGGCC GG-GAAA-CC -GCGGCCT-A GCGAACGCTC G---------
Sulfolobus.acido CAAGTA---- ---------- ---------- ---------- -------CGG GGT-CACGAC GC-GAAA-GC -GGGGCCT-A GCGAACGCTC G---------
Thermofilu.pende AACGCG---- ---------- ---------- ---------- -------TGG GGC-GCAGGC GG-GAAA-CC -GGGGCCT-A GCGAACGCTC G---------
Thermoprot.tenax AACGCA---- ---------- ---------- ---------- -------AGG GGC-GCAGGC GG-GAAA-CC -GGGGCCT-A GAGAACGCTC G---------
Halobacter.halob ACAACG---- ---------- ---------- ---------- -------AGG GAC-GCTGAC GC-GAAA-GC --TGGTCT-A GCGAACCAAT T---------
Halobacter.maris CCAACG---- ---------- ---------- ---------- -------AGG AAC-GCTGAC GC-GAAA-G- -GTGGTCT-A GCGAACCAAT T---------
Halococcus.morrh CCAACA---- ---------- ---------- ---------- ------CGAG AAC-GCTGAC GC-GAAA-GC -GCGGTCT-A GCGAACGGAT G---------
Natronobac.magad ACAACG---- ---------- ---------- ---------- -------ACG GAC-GCTGAC GC-GAAA-GC -GTGGTCT-A GCGAACCAAT TAG-------
Methanococ.vanni ACAAAA---- ---------- ---------- ---------- -------CGC AAC-GAAGAG GC-GAAA-GC -CGGGCCT-A ACGAACCCCT G---------
Methanococ.janna AAAGAG---- ---------- ---------- ---------- -------GCC GAC-CAAGAG GC-GAAA-GC -CGGGCCT-A GCGAACCCCT G---------
Xenopus.laevi C-AGTA---- ---------- ---------- ---------- -------TGA ATA-CAGACC GT-GAAA-GC -GGGGCCT-C ACGATCCTTC TGA-------
Homo.sapie C-AGTA---- ---------- ---------- ---------- -------CGA ATA-CAGACC GT-GAAA-GC -GGGGCCT-C ACGATCCTTC TGAC------
Candida.albic C-AGTG---- ---------- ---------- ---------- -------TGA ATA-CAAACC AT-GAAA-GT -GTGGCCT-A TCGATCCTTT AGTC------
Saccharomy.cerev C-AGTG---- ---------- ---------- ---------- -------TGA ATA-CAAACC ATTGAAA-GT -GTGGCCT-A TCGATCCTTT AGTC------
Schizosacc.pombe C-AGTG---- ---------- ---------- ---------- -------TGA ATA-CAAACC AT-GAAA-GT -GTGGCCT-A TCGATCCTTT GTTC------
Oryza.sativ C-AGTA---- ---------- ---------- ---------- -------CGA ATA-CGAACC GT-GAAA-GC -GTGGCCT-A TCGATCCTTT AGAC------
Arabidopsi.thali C-AGTA---- ---------- ---------- ---------- -------CGA ATA-CGAACC GT-GAAA-GC -GTGGCCT-A TCGATCCTTT AGA-------
Fragaria.anana C-AGTA---- ---------- ---------- ---------- -------CGA ATA-CGAACC GT-GAAA-GC -GTGGCCT-A TCGATCCTTT AGAC------
Chlorella.ellip C-AGTA---- ---------- ---------- ---------- -------CGA ATA-CAAACT GT-GAAA-GC -ATGGCCT-A TCGATCCTTT AGCC------
nEuglena.graci C-AGTA---- ---------- ---------- ---------- -------CGA GTC-CGAAAC GT-GCAA-TC -GTGGCCT-A ACGATCCTTT GGTCAAGT--
Entamoeba.histo C-AGTA---- ---------- ---------- ---------- -------CAA TCA-ATAACT CT-GAAA-TG -ATGGCCT-A ACGATCCCTA AGATTTTT--
nTrypanosom.bruce C-AGTA---- ---------- ---------- ---------- -------CGA ATC-GAGACT GC-GAAA-GC -AAGGCC--A GCGATCCTTT GCGAAGAA--
Giardia.intes C-CGTG---- ---------- ---------- ---------- -------CCG GCG-CGGGCC GC-GAAA-GC -GGGGCCT-A CCGATCCTTC G---------
**************************
7801
Mycobacter.lepra ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Streptomyc.grise ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Bacillus.subti ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Lactobacil.delbr ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Leuconosto.mesen ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Staphyloco.aureu ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Bartonella.bacil ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Rhodopseud.palus ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Rickettsia.ricke ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Bordetella.bronc ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Escherichi.coli ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Haemophilu.influ ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Thermus.therm ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Thermotoga.marit ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Zea.mays.CP ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
nChlamydomo.reinh.CP ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Euglena.graci.CP ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Desulfuroc.mobil ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Sulfolobus.acido ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Thermofilu.pende ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Thermoprot.tenax ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Halobacter.halob ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Halobacter.maris ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Halococcus.morrh ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Natronobac.magad ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Methanococ.vanni ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Methanococ.janna ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Xenopus.laevi ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Homo.sapie ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Candida.albic ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Saccharomy.cerev ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Schizosacc.pombe ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Oryza.sativ ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Arabidopsi.thali ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Fragaria.anana ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Chlorella.ellip ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
nEuglena.graci ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Entamoeba.histo ---------- ---------- ---------- ---------- --AATTAGAA AGAATTTAAA ACATATTAGA TTTATCTGAT GTGTGAGACC GTAAGGTGAT
nTrypanosom.bruce ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Giardia.intes ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
7901
Mycobacter.lepra ---------- TCTGAGT-GG AAGGGGTGTC GCTCAACGGA TAAAAGGTAC CCCGGGGAT- -AACAGGCTG A--TCTT-CC CCAAGAG-TC CATATCGACG
Streptomyc.grise ---------- GGCTTGT-GG AAGCGCTGTC GCTCAACGGA TAAAAGGTAC CCCGGGGAT- -AACAGGCTG A--TCTT-CC CCAAGAG-TC CATATCGACG
Bacillus.subti ---------- TCCGCAT-GG AAGGGCCATC GCTCAACGGA TAAAAGCTAC CCCGGGGAT- -AACAGGCTT A--TCTC-CC CCAAGAG-TC CACATCGACG
Lactobacil.delbr ---------- ACCGCAT-GG AAGGGCCATC ACTCAACGGA TAAAAGCTAC CCTGGGGAT- -AACAGGCTT A--TCTC-CC CCAAGAG-TT CACATCGACG
Leuconosto.mesen ---------- TCCGCAT-GG AAGGGCCATC GCTCAACGGA TAAAAGCTAC CCTGGGGAT- -AACAGGCTC A--TCTC-CC CCAAGAG-TC CACATCGACG
Staphyloco.aureu ---------- TCCGCAT-GG AAGGGCCATC GCTCAACGGA TAAAAGCTAC CCCGGGGAT- -AACAGGCTT A--TCTC-CC CCAAGAG-TT CACATCGACG
Bartonella.bacil ---------- CCCGTGT-GG AAGGGCCATC GCTCAACGGA TAAAAGGTAC GCCGGGGAT- -AACAGGCTG A--TGAC-CC CCAAGAG-TC CATATCGACG
Rhodopseud.palus ---------- CCCGCGT-GG ATGGGCCATC GCTCAACGGA TAAAAGGTAC GCCGGGGAT- -AACAGGCTG A--TGAC-GC CCAAGAG-TC CATATCGACG
Rickettsia.ricke ---------- CCCGAGT-GG AAGGGCCATC GCTCAACGAA TAAAAGGTAC TCCGGGGAT- -AACAGGCTG A--TGAT-TT CCAAGCG-TC CATAGCGACG
Bordetella.bronc ---------- TCTGAT--GG AAGGGCCATC GCTCAACGGA T-AAAGGTAC TCTGGG-AT- -AACAGGCTG A--TACC-GC CCAAGAG-TT CATATCGACG
Escherichi.coli ---------- TCTGAAT-GG AAGGGCCATC GCTCAACGGA TAAAAGGTAC TCCGGGGAT- -AACAGGCTG A--TACC-GC CCAAGAG-TT CATATCGACG
Haemophilu.influ ---------- TCTGAAT-GG AAGGGCCATC GCTCAACGGA TAAAAGGTAC TCCGGGGAT- -AACAGGCTG A--TACC-GC CCAAGAG-TT CATATCGACG
Thermus.therm ---------- CCCGTGT-GG AAGGGCCATC GATCAACGGA TAAAAGTTAC CCCGGGGAT- -AACAGGCTG A--TCTC-CC CCGAGCG-TC CACAGCGGCG
Thermotoga.marit ---------- CCCGTGT-GG AAGGGCCGTC GATCAACGGA TAAAAGTTAC CCCGGGGAT- -AACAGGCTG G--TCCC-GC CCGAGAG-TT CACATCGACG
Zea.mays.CP ---------- GCCGAGT-GG AAGGGCCGTC GCTCAACGGA TAAAAGTTAC TCTAGGGAT- -AACAGGCTG A--TCTT-CC CCAAGAG-TC CACATCGACG
nChlamydomo.reinh.CP ---------- GCCGCGT-GG AAGGGCCGTC GCTCAACGGA TAAAAGTTAC TCTAGGGAT- -AACAGGCTG A--TCTT-CC CCAAGAG-TT CACATCGACG
Euglena.graci.CP ---------- GCTGTAT-GG AAAGGCCGTC G-TAAACAGA TAAAAGTTAC TCTAGGGAT- -AACAGGCTG A--TCTC-CC CCAAGAG-TT CACATCGACG
Desulfuroc.mobil -------TGC CCCCCTC-GG TGGGGGCCGG GCATGACAGA --AAAGTTAC CCCGGGGAT- -AACAGAGTC G--TCGC-GG GCGAGAG-CT CCCATCGACC
Sulfolobus.acido -------TGC CCCCACA-CG TGGGGGCCGG GCATGACAGA --AAAGTTAC CCCGGGGAT- -AACAGGGTC G--TCGC-GG GCGAGAG-CT CACATCGACC
Thermofilu.pende -------TGC CCCCTTC-GG TGGGGGCCGG GCATGACAGA --AAAGTTAC CCCGGGAGT- -AACCGGCTC G--TCGC-GG GCGAGAG-TT CACATCGACC
Thermoprot.tenax -------TGC CCCCACC-AG TGGGGGCCGG GCATGACAGA --AAAGTTAC CCCAGGAAT- -AACCGGCTC G--TCGC-GG GTGAGAG-TC CCCATCGACC
Halobacter.halob -------AGG CTGCTT--GA TGCGGCCAAT TGCTGACAGA --AAAGCTAC CTTAGGGAT- -AACAGAGTC G--TCAC-TC GCAAGAG-CA CATATCGACC
Halobacter.maris -------AGC CTGCTT--GA TGCGGGCAAT TGATGACAGA --AAAGCTAC CCTAGGGAT- -AACAGAGTC G--TCAC-TC GCAAGAG-CA CATATCGACC
Halococcus.morrh -------AGC CTGCTT--GA TGCGGGCCAT TTACGACAGA --AAAGCTAC CTTAGGGAT- -AACAGAGTC G--TCAC-CC GCAAGAG-CA CATATCGACC
Natronobac.magad ---------- GCTGCTT-GA TGCGGCCAAT TGCTGACAAA --AAAGCTAC CTTAGGGAT- -AACAGAGTC G--TCAC-CC GCAAGAG-CA CATATCGACC
Methanococ.vanni -------TGC CTCACT--GA TGGGGGCCAG GGATGACAAA --AAAGCTAC CCCGGGGAT- -AACAGAGTT G--TCGC-GG GCAAGAG-CC CATATCGACC
Methanococ.janna -------TGC CTCACC--GA TGGGGGCCAG GGATAACAGA --AAAGCTAC CCCGGGGAT- -AACAGAGTT G--TCGC-GG GCAAGAG-CC CATATCGACC
Xenopus.laevi ---------- CTTTTTGGGT TTTAAGCAGG AGGTGTCAGA --AAAGTTAC CACAGGGAT- -AACTGGCTT G--TGGC-GG CCAAGCG-TT CATAGCGACG
Homo.sapie ---------- CTT-TTGGGT TTTAAGCAGG AGGTGTCAGA --AAAGTTAC CACAGGGAT- -AACTGGCTT G--TGGC-GG CCAAGCG-TT CATAGCGACG
Candida.albic ---------- CCTC-GGAAT TTGAGGCTAG AGGTGCCAGA --AAAGTTAC CACAGGGAT- -AACTGGCTT G--TGGC-AG TCAAGCG-TT CATAGCGACA
Saccharomy.cerev ---------- CCTC-GGAAT TTGAGGCTAG AGGTGCCAGA --AAAGTTAC CACAGGGAT- -AACTGGCTT G--TGGC-AG TCAAGCG-TT CATAGCGACA
Schizosacc.pombe ---------- CCTC-GAAAT TTGAGGACAG AGGTGCCAGA --AAAGTTAC CACAGGGAT- -AACTGGCTT G--TGGC-AG CCAAGCG-TT CATAGCGACG
Oryza.sativ ---------- CTTC-GGAGT TTGAAGCTAG AGGTGTCAGA --AAAGTTAC CACAGGGAT- -AACTGGCTT G--TGGC-AG CCAAGCG-TT CATAGCGACG
Arabidopsi.thali ---------- CTTC-GGAAT TTGAAGCTAG AGGTGTCAGA --AAAGTTAC CACAGGGAT- -AACTGGCTT G--TGGC-AG CCAAGCG-TT CATAGCGACG
Fragaria.anana ---------- CTTT-GGAAT TTAAAGCTAG AGGTGTCAGA --AAAGTTAC CACAGGGAT- -AACTGGCTT G--TGGC-AG CCAAGCG-TT CATAGCGACG
Chlorella.ellip ---------- CTTC-GGGAT TTGAAGCTAG AGGTGTCAGA --AAAGTTAC CACAGGGAT- -AACTGGCTT G--TGGC-AG CCAAGCG-TT CATAGCGACG
nEuglena.graci ---GTGCGAA TTCT-GGATA TCGAAGCCAG AGGTGTCAGA --AAAATTAC CACAGGGAT- -AACTGGCTT G--TGGC-TG CCAAGCG-TT CAAAGCGACG
Entamoeba.histo TTCTAGTTAA TCCTTTAATA ATAAGGCTTG GGGTGTCAGA --AAAGTTAC CACAGGGAT- -AACTGGCTT G--TGGC-AG CCAAGCG-CT CATAGCGACG
nTrypanosom.bruce ---CAGGAAA TATGA-ACAA ATCATACCAG AGGTGTCAGA --ATAATTAC CACAGGGAT- -AACTGGCTT G--TGGC-GG CCAAGCG-TT CATAGCGACG
Giardia.intes --------CC GCCCCGG-CC GCGGGCGCGG AGGTGGCAGA --AAAGTTAC CACAGGGAT- -AACTGGCTT G--TGGC-CG CCGAGCG-CC CGCAGCGACG
*************************************************************************
8001
Mycobacter.lepra G--GATGGTT T-GGCA-CCT CGAT------ ----GTCGGC -TCGTCGCAT CCTGGGG-CT GAAGCA-GG- TCCCAAG-GG TTGGGCTGTT CGCCCATT-A
Streptomyc.grise G--GATGGTT T-GGCA-CCT CGAT------ ----GTCGGC -TCGTCGCAT CCTGGGG-CT GGAGTC-GG- TCCCAAG-GG TTGGGCTGTT CGCCCATT-A
Bacillus.subti G--GGAGGTT T-GGCA-CCT CGAT------ ----GTCGGC -TCATCGCAT CCTGGGG-CT GTAGTC-GG- TCCCAAG-GG TTGGGCTGTT CGCCCATT-A
Lactobacil.delbr G--GGAGGTT T-GGCA-CCT CGAT------ ----GTCGGC -TCGTCGCAT CCTGGGG-CT GAAGTC-GG- TCCCAAG-GG TTGGGCTGTT CGCCCATT-A
Leuconosto.mesen G--GGAGGTT T-GGCA-CCT CGAT------ ----GTCGGC -TCATCGCAT CCTGGGG-CT GTAGTC-GG- TCCCAAG-GG TTGG-CTGTT CGCCCATT-A
Staphyloco.aureu G--GGAGGTT T-GGCA-CCT CGAT------ ----GTCGGC -TCATCGCAT CCTGGGG-CT GTAGTC-GG- TCCCAAG-GG TTGGGCTGTT CGCCCATT-A
Bartonella.bacil G--GGTTGTT T-GGCA-CCT CGAT------ ----GTCGAC -TCATCGCAT CCTGGGG-CT GGAGCA-GG- TCCCAAG-GG TATGGCTGTT CGCCATTT-A
Rhodopseud.palus G--CGTCGTT T-GGCA-CCT CGAT------ ----GTCGGC -TCATCACAT CCTGGGG-CT GGAGAA-GG- TCCCAAG-GG TTCGGCTGTT CGCCGATT-A
Rickettsia.ricke A--AATCGTT T-GGCA-CCT CGAT------ ----GTCGGC -TCATCACAT CCTGGGG-CT GGAGAA-GG- TCCCAAG-GG TTCGGCTGTT CGCCGATT-A
Bordetella.bronc G--CGGTGTT T-GGCA-CCT CGAT------ ----GTCGGC -TCATCTCAT CCTGGGG-CT GAAGCA-GG- TCC-AAG-GG TAT-GCTGTT CGCCATTT-A
Escherichi.coli G--CGGTGTT T-GGCA-CCT CGAT------ ----GTCGGC -TCATCACAT CCTGGGG-CT GAAGTA-GG- TCCCAAG-GG TATGGCTGTT CGCCATTT-A
Haemophilu.influ G--CGGTGTT T-GGCA-CCT CGAT------ ----GTCGGC -TCATCACAT CCTGGGG-CT GAAGTA-GG- TCCCAAG-GG TATGGCTGTT CGCCATTT-A
Thermus.therm G--GGAGGTT T-GGCA-CCT CGAT------ ----GTCGGC -TCGTCGCAT CCTGGGG-CT GAAGAA-GG- TCCCAAG-GG TTGGGCTGTT CGCCCATT-A
Thermotoga.marit G--CGGGGTT C-GGCA-CCT CGAT------ ----GTCGGC -TCATCCCAT CCTGGGG-CT GAAGCA-GG- TCCCAAG-GG TTGGGCTGTT CGCCCATT-A
Zea.mays.CP G--GAAGGTT T-GGCA-CCT CGAT------ ----GTCGGC -TCTTCGCCA CCTGGAG-CT GTAGGT-GG- TTCCAAG-GG TTGGGCTGTT CGCCCATT-A
nChlamydomo.reinh.CP G--GAAGGTT T-GGCA-CCT CGAT------ ----GTCGGC -TCATCACAT CCTCGGT-CT GTAGTA-GG- TCCGAAG-GG TTGGGCTGTT CGCCCATT-A
Euglena.graci.CP G--GGAGGTT T-GGCA-CCT CGAT------ ----GTCGGC -TCATCGCAA CCTGGGG-CG GTAGTA-CG- TCCCAAG-GG TTGGGCTGTT CGCCCATT-A
Desulfuroc.mobil C--CGCGGTT T-GCTA-CAT CGAT------ ----GTCGGC -TCTTCCCAT CCTGGGG-GT GCAGCA-GC- CCCCAAG-GG TGGGGCTGCC CGCCCATT-A
Sulfolobus.acido C--CGCGGTT T-GCTA-CAT CGAT------ ----GTCGGC -TCTTCCCAC CCTGGAG-GT GCAGCT-GC- CTCCAAG-GG TAGGGCTGCC CGCCCGTT-A
Thermofilu.pende C--CGCGGTT T-GGTA-CCC AGAC------ ----GTCGTC -TCTTCCTAG CTTGGCC-CT GCAGCA-GG- GGCCAAG-AG TGGGGCTGCT CGCCCATT-A
Thermoprot.tenax C--CGCGGTT T-GGTA-CCC AGAC------ ----GTCGTC -TCTTCCCAT CCTGGCG-GT GCAGCA-GC- CGCCAAG-GG TGGGGCTGCC CGCCCATT-A
Halobacter.halob G--AGTGGCT --GCTA-CCT CGAT------ ----GTCGGT -TCCCTCCAT CCTGCCC-GT GCAGAA-GC- GGGCAAG-GG TGAGGTTGTT CGCCTATT-A
Halobacter.maris G--AGTGGCT T-GCTA-CCT CGAT------ ----GTCGGT -TCCCTCCAT CCTGCCC-GT GCAGAA-GC- GGGCAAG-GG TGAGGTTGTT CGCCTATT-A
Halococcus.morrh G--GGTGGCT T-GCTA-CCT CGAT------ ----GTCGGT -TCCCTCCAT CCTGCCC-GT GCAGCA-GC- GGGCAAG-GG TGAGGTTGTT CGCCTATT-A
Natronobac.magad G--GGTGGCT T-GCTA-CCT CGAT------ ----GTCGGT -TCCCTCCAT CCTGCCC-GT GCAGAA-GC- GGGCAAG-GG TGAGGTTGTT CGCCTATT-A
Methanococ.vanni C--CGCGGCT T-GCTA-CCT CGAT------ ----GTCGGT -TTTTCCCAT CCTGGGT-CT GCAGCA-GG- ACCCAAG-GG TGGGGCTGTT CGCCCATT-A
Methanococ.janna C--CGCGGCT T-GCTA-CAT CGAT------ ----GTCGGT -TCTTCCCAT CCTGGGC-CT GCAGCA-GG- GCCCAAG-GG TGGGGCTGTT CGCCCATT-A
Xenopus.laevi T--CGCTTTT T-GATC-CTT CGAT------ ----GTCGGC -TCTTCCTAT CATTGTG-AA GCAGAA-TT- CACCAAG-CG TTGGATTGTT CACCCACT-A
Homo.sapie T--CGCTTTT T-GATC-CTT CGAT------ ----GTCGGC -TCTTCCTAT CATTGTG-AA GCAGAA-TT- CGCCAAG-CG TTGGATTGTT CACCCACT-A
Candida.albic T--TGCTTTT T-GATT-CTT CGAT------ ----GTCGGC -TCTTCCTAT CATACCG-AA GCAGAA-TT- CGGTAAG-CG TTGGATTGTT CACCCACT-A
Saccharomy.cerev T--TGCTTTT T-GATT-CTT CGAT------ ----GTCGGC -TCTTCCTAT CATACCG-AA GCAGAA-TT- CGGTAAG-CG TTGGATTGTT CACCCACT-A
Schizosacc.pombe T--TGCTTTT T-GATT-CTT CGAT------ ----GTCGGC -TCTTCCTAT CATACCG-AA GCAGAA-TT- CGGTAAG-CG TTGGATTGTT CACCCACT-A
Oryza.sativ T--TGCTTTT T-GATC-CTT CGAT------ ----GTCGGC -TCTTCCTAT CATTGTG-AA GCAGAA-TT- CACCAAG-TG TTGGATTGTT CACCCACC-A
Arabidopsi.thali T--TGCTTTT T-GATC-CTT CGAT------ ----GTCGGC -TCTTCCTAT CATTGTG-AA GCAGAA-TT- CACCAAG-TG TTGGATTGTT CACCCACC-A
Fragaria.anana T--TGCTTTT T-GATC-CTT CGAT------ ----GTCGGC CTCTTCCTAT CATTGCG-AA GCAGAA-TT- CACCAAG-TG TTGGATTGTT CACCCACC-A
Chlorella.ellip T--TGCTTTT T-GATC-CTT CGAT------ ----GTCGGC -TCTTCCTAT CATGTGC-CC GCAGCA-GA- GCACAAG-TG TCGGCTTGTT CACCCGCT-A
nEuglena.graci T--CGCTTTT T-GATC-CTT CGAT------ ----GTCGGC -TCTTCCTAG CTTCCCACCC GCAGCC-GA- GTGGAAG-AG TTGGATTGTT CACCCACC-A
Entamoeba.histo T--TGCTTTT T-GATC-CTT CGAT------ ----GTCGGC -TCTTCCTAT CCATTTC-AA GCAGAA-TT- GAAAAAA-GG TATGATTGTT CACCATTT-A
nTrypanosom.bruce T--CGCTTTT T-GATC-CTT CGAT------ ----GTCGGC -TCTTCCTAA CCTAGCG-CC GCAGAA-GA- CGCTAAG-GG TTGGATTGTT CACCCACT-G
Giardia.intes C--GGCTTTT T-GATC-CTT CGAT------ ----GTCGGC -TCTTCCTAC CGTCCGC-GC GCACCG-GC- GCGGAAG-CG TCGGATTGTT CACCCGTT-C
************************************************************************ ******************************
8101
Mycobacter.lepra A-AGCGGCAC G-CGAGCTGG GTTTAGAA-C GTCGTGAGAC AGTT-CGGTC TCTATCCGCC GCGCGCGT-- ---------- ---------- ----------
Streptomyc.grise A-AGCGGTAC G-CGAGCTGG GTTTAGAA-C GTCGTGAGAC AGTT-CGGTC CCTATCCGCT GTGCGCGT-- ---------- ---------- ----------
Bacillus.subti A-AGCGGTAC G-CGAGCTGG GTTCAGAA-C GTCGTGAGAC AGTT-CGGTC CCTATCCGTC GCGGGCGC-- ---------- ---------- ----------
Lactobacil.delbr A-AGCGGCAC G-CGAGCTGG GTTCAGAA-C GTCGTGAGAC AGTT-CGGTC CCTATCCGTC GTGGGCGC-- ---------- ---------- ----------
Leuconosto.mesen A-AGCGGTAC G-CGAGCTGG GTTCAGAA-C GTCGTGAGAC AGTT-CGGTC CCTATCCGTC GCGGGCGC-- ---------- ---------- ----------
Staphyloco.aureu A-AGCGGTAC G-CGAGCTGG GTTCAGAA-C GTCGTGAGAC AGTT-CGGTC CCTATCCGTC GTGGGCGT-- ---------- ---------- ----------
Bartonella.bacil A-AGCGGTAC G-TGAGTTGG GTTCAGAA-C GTCGTGAGAC AGTT-CGGTC CCTATCTGCC GTGGGTGT-- ---------- ---------- ----------
Rhodopseud.palus A-AGTGGTAC G-TGAGCTGG GTTCAGAA-C GTCGTGAGAC AGTT-CGGTC CCTATCTGCC GTGGGTGT-- ---------- ---------- ----------
Rickettsia.ricke A-AGTGGTAC G-TGAGCTGG GTTTAGAA-C GTCGTGAGAC AGTT-CGGTC CCTATCTGCC GTGGGTGT-- ---------- ---------- ----------
Bordetella.bronc A-AGAGGTAC GCTGAGCTGG GTTTAGAAAC GTCGTGAGAC AGTTCTGGTC CCTATCTGCC GTGGGCGCT- ---------- ---------- ----------
Escherichi.coli A-AGTGGTAC G-CGAGCTGG GTTTAGAA-C GTCGTGAGAC AGTT-CGGTC CCTATCTGCC GTGGGCGC-- ---------- ---------- ----------
Haemophilu.influ A-AGTGGTAC G-CGAGCTGG GTTTAGAA-C GTCGTGAGAC AGTT-CGGTC CCTATCTGCC GTGGGCGT-- ---------- ---------- ----------
Thermus.therm A-AGCGGCAC G-CGAGCTGG GTTCAGAA-C GTCGTGAGAC AGTT-CGGTC TCTATCCGCC ACGGGCGC-- ---------- ---------- ----------
Thermotoga.marit A-AGGGGTAC G-TGAGCTGG GTTCAGAC-C GTCGTGAGAC AGGT-CGGTC CCTATCTGCC GCGGGCGT-- ---------- ---------- ----------
Zea.mays.CP A-TGCGGTAC G-TGAGCTGG GTTCAGAA-C GTCGTGAGAC -GTT-CGGTC CATATCCGGT GTGGGCGT-- ---------- ---------- ----------
nChlamydomo.reinh.CP A-AGTGGTAC G-TGAGCTGG GTTCAAAA-C GTCGTGAGAC AGTT-TGGTC CATATCCGGT GTAGGCGT-- ---------- ---------- ----------
Euglena.graci.CP A-AGCGGTAC G-TGAGCTGG GTTCAGAA-C GTCGAGAGAC AGTT-CGGTC CATATCCGGT GTGAGCGT-- ---------- ---------- ----------
Desulfuroc.mobil A-AGGGGAAC G-TGAGCTGG GTTTAGAC-C GTCGTGAGAC AGGT-CGGAC TCTACCCGCG GGGGGTGC-- ---------- ---------- ----------
Sulfolobus.acido A-AGGGGAGC G-TGAGCTGG GTTTAGAC-C GTCGCGAGAC AGGT-CGGAC TCTAAGGGTA GGGAGCTCG- ---------- ---------- ----------
Thermofilu.pende A-AAGGGAAC G-TGAGATGG GTTTAGAC-C GTCGCGAGAC AGGT-CGGAC TCTACCTGCC GGGACCGT-- ---------- ---------- ----------
Thermoprot.tenax A-AGGGGAAC G-TGAGATGG GTTCAGAC-C GTCGCGAGAC AGGT-CGGTC TCTACCTGTC GGGGGCGT-- ---------- ---------- ----------
Halobacter.halob A-AGGAGGTC G-TGAGCTGG GTTTAGAC-C GTCGTGAGAC AGGT-CGGCT GCTATCTATT GGGGGTGT-- ---------- ---------- ----------
Halobacter.maris A-AGGAGGTC G-TGAGCTGG GTTTAGAC-C GTCGTGAGAC AGGT-CGGCT GCTATCTACT GGGTGTGT-- ---------- ---------- ----------
Halococcus.morrh A-AGGAGGTC G-TGAGCTGG GTTTAGAC-C GTCGTGAGAC AGGT-CGGCT GCTATCTATT GGGGGTGT-- ---------- ---------- ----------
Natronobac.magad A-AGGAGGTC G-TGAGCTGG GTTTAGAC-C GTCGTGAGAC AGGT-CGGCT GCTATCTATT GGGGGTGT-- ---------- ---------- ----------
Methanococ.vanni A-AGGGGATC A-TGAGCTGG GTTTAGAC-C GTCGTGAGAC AGGT-TGGTT GCTATCTGCT GGATGTGT-- ---------- ---------- ----------
Methanococ.janna A-AGGGGATC G-TGAGCTGG GTTTAAAC-C GTCGTGAGAC AGGT-TGGTT GCTATCTGCT GGGGGTGT-- ---------- ---------- ----------
Xenopus.laevi A-TAGGGAAC G-TGAGCTGG GTTTAGAC-C GTCGTGAGAC AGGT-TAGT- TTTACCCTAC TGATGAT--- ---------- ---------- ----------
Homo.sapie A-TAGGGAAC G-TGAGCTGG GTTTAGAC-C GTCGTGAGAC AGGT-TAGT- TTTACCCTAC TGATGAT--- ---------- ---------- ----------
Candida.albic A-TAGGGAAC G-TGAGCTGG GTTTAGAC-C GTCGTGAGAC AGGT-TAGT- TTTACCCTAC TGATGAA--- ---------- ---------- ----------
Saccharomy.cerev A-TAGGGAAC A-TGAGCTGG GTTTAGAC-C GTCGTGAGAC AGGT-TAGT- TTTACCCTAC TGATGAA--- ---------- ---------- ----------
Schizosacc.pombe A-TAGGGAAC G-TGAGCTGG GTTTAGAC-C GTCGTGAGAC AGGT-TAGT- TTTACCCTAC TGATGAA--- ---------- ---------- ----------
Oryza.sativ A-TAGGGAAC G-TGAGCTGG GTTTAGAC-C GTCGTGAGAC AGGT-TAGT- TTTACCCTAC TGATGAC--- ---------- ---------- ----------
Arabidopsi.thali A-TAGGGAAC G-TGAGCTGG GTTTAGAC-C GTCGTGAGAC AGGT-TAGT- TTTACCCTAC TGATGCC--- ---------- ---------- ----------
Fragaria.anana A-TAGGGAAC G-TGAGCTGG GTTTAGAC-C GTCGTGAGAC AGGT-TAGT- TTTACCCTAC TGATGAC--- ---------- ---------- ----------
Chlorella.ellip A-TAGGGAAC G-TGAGCTGG GTTTAGAC-C GTCGTGAGAC AGGT-TAGT- TTTACCCTAC TGTTGGT--- ---------- ---------- ----------
nEuglena.graci A-CAGGGAAC G-TGAGCTGG GTTTAGAC-C GTCGTGAGAC AGGT-TGGT- TTTACCCTCC TGCCACAG-- ---------- ---------- ----------
Entamoeba.histo A-TAGGGAAC G-TGAGCTGG GTTTAGAC-C GTCGTGAGAC AGGT-TAGT- TTTACCCTAC CGTTTCGGTA GA-------- ---------- ----------
nTrypanosom.bruce A-CAGGGAAC G-TGAGCTGG GTTTAGAC-C GTCGTGAGAC AGGT-TGGT- TTTACCCTAC TTGGCTGGAG ATTGCGAGTA AAAGATTATC CGCGCAAAGC
Giardia.intes --AAGGGATC G-TGAGCTGG GTTTAGAC-C GTCGTGAGAC AGGT-TAGT- TTTACCCTAC TGGCCC---- ---------- ---------- ----------
**************************************************************
8201
Mycobacter.lepra ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Streptomyc.grise ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Bacillus.subti ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Lactobacil.delbr ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Leuconosto.mesen ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Staphyloco.aureu ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Bartonella.bacil ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Rhodopseud.palus ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Rickettsia.ricke ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Bordetella.bronc ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Escherichi.coli ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Haemophilu.influ ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Thermus.therm ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Thermotoga.marit ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Zea.mays.CP ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
nChlamydomo.reinh.CP ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Euglena.graci.CP ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Desulfuroc.mobil ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Sulfolobus.acido ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Thermofilu.pende ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Thermoprot.tenax ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Halobacter.halob ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Halobacter.maris ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Halococcus.morrh ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Natronobac.magad ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Methanococ.vanni ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Methanococ.janna ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Xenopus.laevi ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Homo.sapie ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Candida.albic ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Saccharomy.cerev ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Schizosacc.pombe ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Oryza.sativ ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Arabidopsi.thali ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Fragaria.anana ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Chlorella.ellip ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
nEuglena.graci ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Entamoeba.histo ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
nTrypanosom.bruce GGAGGCAGTC CGTTTTTTTC TGGGTCTGCC GTTCGGTGGC ATGTGCTTGG CGCTGCCATC TCAGCACACA ACATTTATGA TATTAATAAT ATTATTATTA
Giardia.intes ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
8301
Mycobacter.lepra ---------- ---------- ---------- ---------- ---------- ---------- CAGAAACTTG A-GGAAAT-C T-GTCCCTAG T-ACGAGAGG
Streptomyc.grise ---------- ---------- ---------- ---------- ---------- ---------- AGGAATATTG A-GAAGGG-C T-GTCCCTAG T-ACGAGAGG
Bacillus.subti ---------- ---------- ---------- ---------- ---------- ---------- AGGAAATTTG A-GAGGAG-C T-GTCCTTAG T-ACGAGAGG
Lactobacil.delbr ---------- ---------- ---------- ---------- ---------- ---------- AGGAAATTTG A-GAGGAG-C T-GTCCTTAG T-ACGAGAGG
Leuconosto.mesen ---------- ---------- ---------- ---------- ---------- ---------- AGGAAATTTG A-GAGGAG-C T-GTCCTTAG T-ACGAGAGG
Staphyloco.aureu ---------- ---------- ---------- ---------- ---------- ---------- AGGAAATTTG A-GAGGAG-C T-GTCCTTAG T-ACGAGAGG
Bartonella.bacil ---------- ---------- ---------- ---------- ---------- ---------- AGGAATATTG A-CAGGAT-C T-GTCCCTAG T-ACGAGAGG
Rhodopseud.palus ---------- ---------- ---------- ---------- ---------- ---------- TGGAATGTTG A-GAGGAT-T T-GCCCCTAG T-ACGAGAGG
Rickettsia.ricke ---------- ---------- ---------- ---------- ---------- ---------- AGGAAGTTTG A-GAGGAT-C T-GCCTTTAG T-ACGAGAGG
Bordetella.bronc ---------- ---------- ---------- ---------- ---------- ---------- TGGAAACTTG AGCAGGAACC T-GCTCCTAG T-ACGAGAGG
Escherichi.coli ---------- ---------- ---------- ---------- ---------- ---------- TGGAGAACTG A-GGGGGG-C T-GCTCCTAG T-ACGAGAGG
Haemophilu.influ ---------- ---------- ---------- ---------- ---------- ---------- AGGATGATTG A-TTGGGG-C T-GCTCCTAG T-ACGAGAGG
Thermus.therm ---------- ---------- ---------- ---------- ---------- ---------- AGGAGGCTTG A-GGGGGG-C T-CTTCCTAG T-ACGAGAGG
Thermotoga.marit ---------- ---------- ---------- ---------- ---------- ---------- AGGAGGCTTG A-GGGGGG-T C-CTCCCTTG T-ACGAGAGG
Zea.mays.CP ---------- ---------- ---------- ---------- ---------- ---------- TAGAGCATTG A-GAGGAC-C T-TTCACTAG T-ACGAGAGG
nChlamydomo.reinh.CP ---------- ---------- ---------- ---------- ---------- ---------- TAGAGCATTG A-GAGTAG-C C-TTTCATAG T-ACGAGAGG
Euglena.graci.CP ---------- ---------- ---------- ---------- ---------- ---------- TAGAGTATTG A-AAGGCG-C T-TTCCTTAG T-ACGAGAGG
Desulfuroc.mobil ---------- ---------- ---------- ---------- ---------- ---------- GGGCCGCCTG A-GGGGAA-G CTGCCCTCAG T-ACGAGAGG
Sulfolobus.acido ---------- ---------- ---------- ---------- ---------- ---------- GGACCGCTTG A-GGGGAAGG GAACCCCTAG T-ACGAGAGG
Thermofilu.pende ---------- ---------- ---------- ---------- ---------- ---------- TGGCCGCCTG A-GGGGAT-G GTCCGCACAG T-ACGAGAGG
Thermoprot.tenax ---------- ---------- ---------- ---------- ---------- ---------- TGGCCGCCTG A-GGGGAA-G GTGCCCTCAG T-ACGAGAGG
Halobacter.halob ---------- ---------- ---------- ---------- ---------- ---------T TTGGTGCTTG A-CAGGAA-C GTTCGTATAG T-ACGAGAGG
Halobacter.maris ---------- ---------- ---------- ---------- ---------- ---------A ATGGTGTCTG A-CAAGAA-C GACCGTATAG T-ACGAGAGG
Halococcus.morrh ---------- ---------- ---------- ---------- ---------- ---------C ATGGTACCTG A-CGGGAA-C GATCGTATAG T-ACGAGAGG
Natronobac.magad ---------- ---------- ---------- ---------- ---------- ---------T ATGGTTCCTG A-CGGGAA-C GTTCGTATAG T-ACGAGAGG
Methanococ.vanni ---------- ---------- ---------- ---------- ---------- ---------- AGGCTGTCTG A-GGGAAA-G GTGGCTCTAG T-ACGAGAGG
Methanococ.janna ---------- ---------- ---------- ---------- ---------- ---------- TGGCCGCCTG A-GGGGAA-G GTGGCTCTAG T-ACGAGAGG
Xenopus.laevi ---------- ---------- ---------- ---------- ---------- ---------G TGTTGTCGCA A-TAGTAA-T C-CTGCTCAG T-ACGAGAGG
Homo.sapie ---------- ---------- ---------- ---------- ---------- ---------G TGTTGTTGCC A-TGGTAA-T C-CTGCTCAG T-ACGAGAGG
Candida.albic ---------- ---------- ---------- ---------- ---------- ---------T GTTA-TCGCA A-TAGTAA-T T-GAACTTAG T-ACGAGAGG
Saccharomy.cerev ---------- ---------- ---------- ---------- ---------- ---------T GTTACCAGCA A-TAGTAA-T T-GAACTTAG T-ACGAGAGG
Schizosacc.pombe ---------- ---------- ---------- ---------- ---------- ---------G TGTCGTCGCA A-TGGTAA-T T-CAACTTAG T-ACGAGAGG
Oryza.sativ ---------- ---------- ---------- ---------- ---------- ---------- -CGTGCCGCG A-TAGTAA-T T-CAACCTAG T-ACGAGAGG
Arabidopsi.thali ---------- ---------- ---------- ---------- ---------- ---------- -CGCGTCGCG A-TAGTAA-T T-CAACCTAG T-ACGAGAGG
Fragaria.anana ---------- ---------- ---------- ---------- ---------- ---------- -AGTGTCGCA A-TAGTAA-T T-CAACCTAG T-ACGAGAGG
Chlorella.ellip ---------- ---------- ---------- ---------- ---------- ---------T CGATTCCGCC A-TAGTAA-T T-CGGCTCAG T-ACGAGAGG
nEuglena.graci ---------- ---------- ---------- ---------- ---------- --------AT GGGCGTGACA A-TGGCAT-C A-CATGGTAG T-ACGAGAGG
Entamoeba.histo ---------- ---------- ---------- ---------- ---------- ----TTTTCA AAGTATTTAG A-TAGTAG-C A-CAACTCAG T-ACGAGAGG
nTrypanosom.bruce TCGTATAATG CTGTTATACA CACGTGTATA TGTGTTTGTG AGATTGTGAA GGGATCTCGC AGGCATCGTG A-GGGAAG-T A-TGGGGTAG T-ACGAGAGG
Giardia.intes ---------- ---------- ---------- ---------- ---------- ---------- ---CGGGGCC A-GAGCAC-G G-CGGGCCAG T-ACGAGAGG
**************
8401
Mycobacter.lepra A-CCGGGAC- -GGA--CGAA CCTCTGGTAT A--CCAGTTG TCTCACCA-- ---------- ---------- ---------- ---------- ----------
Streptomyc.grise A-CCGGGAC- -GGA--CGAA CCTCTGGTGT G--CCAGTTG TCCTGCCA-- ---------- ---------- ---------- ---------- ----------
Bacillus.subti A-CCGGGAT- -GGA--CGCA CCGCTGGTGT A--CCAGTTG TTCTGCCA-- ---------- ---------- ---------- ---------- ----------
Lactobacil.delbr A-CCGGGAT- -GGA--CGCA CCGCTGGTGT A--CCAGTTG TCTTGCCA-- ---------- ---------- ---------- ---------- ----------
Leuconosto.mesen A-CCGGGAT- -GGA--CATA CCGCTGGTGT A--CCAGTTG TTCCGCCA-- ---------- ---------- ---------- ---------- ----------
Staphyloco.aureu A-CCGGGAT- -GGA--CATA CCTCTGGTGT A--CCAGTTG TCGTGCCA-- ---------- ---------- ---------- ---------- ----------
Bartonella.bacil A-CCGGGAT- -GGA--CGTA TCTCTGGTGG A--CCTGTTG TGGCGCCA-- ---------- ---------- ---------- ---------- ----------
Rhodopseud.palus A-CCGGGGT- -GAA--CGTA CCTCTGGTGG A--GCTGTTG TCGCGCCA-- ---------- ---------- ---------- ---------- ----------
Rickettsia.ricke A-CCGAGGT- -GGA--CGTA CCCCTGGTGG A--CCAGTTG TCGTGCCA-- ---------- ---------- ---------- ---------- ----------
Bordetella.bronc A-CCGGAGT- -GGA--CGTA CCTCTGGTGT A--CCGGTTG TCATGCCA-- ---------- ---------- ---------- ---------- ----------
Escherichi.coli A-CCGGAGT- -GGA--CGCA TCACTGGTGT T--CGGGTTG TCATGCCA-- ---------- ---------- ---------- ---------- ----------
Haemophilu.influ A-CCGGAGT- -GGA--CGCA TCACTGGTGT T--CCGGTTG TGTCGCCA-- ---------- ---------- ---------- ---------- ----------
Thermus.therm A-CCGGAAG- -GGA--CGCA CCTCTGGTTT C--CCAGCTG TCCCTCCA-- ---------- ---------- ---------- ---------- ----------
Thermotoga.marit A-CCGGGAG- -GAG--GGGG CCTCTGGTGT A--CCGGCTG TCGCGCCA-- ---------- ---------- ---------- ---------- ----------
Zea.mays.CP A-CCGGGAA- -GGA--CGCA CCTCTGGTGT A--CCAGTTA TCGTGCCT-- ---------- ---------- ---------- ---------- ----------
nChlamydomo.reinh.CP A-CCTGAAA- -GGA--CATG CCAATTGTGT A--CCAGTTC TCATTCCA-- ---------- ---------- ---------- ---------- ----------
Euglena.graci.CP A-CCGGGAA- -GGA--CGCA CCACTGATGT A--CCAGTTT TTGTGCCA-- ---------- ---------- ---------- ---------- ----------
Desulfuroc.mobil A-ACGGGGC- -GGC--GCGG CCTCTGGTTT A--CCGGTTG TCC-TGGC-- ---------- ---------- ---------- ---------- ----------
Sulfolobus.acido A-ACAGGGT- -TCC--GGGG CCTCCAGTTT A--CCGGTTG TCC-GGTA-- ---------- ---------- ---------- ---------- ----------
Thermofilu.pende A-ACTGCGG- -GCC--GTGG CCTCTAGTGT A--CCGGTTG TCC-GGCA-- ---------- ---------- ---------- ---------- ----------
Thermoprot.tenax A-ACGGGGC- -GCC--GCGG CCTCTA-TCT A--CCGGTTG TCC-GGGC-- ---------- ---------- ---------- ---------- ----------
Halobacter.halob A-ACTACGA- -ACG--GGTG CCACTGGTGT A--TCGGTTG TCC-GAGA-- ---------- ---------- ---------- ---------- ----------
Halobacter.maris A-ACTACGG- -TTG--GTGG CCACTGGTGT A--CCGGTTG TTC-GAGA-- ---------- ---------- ---------- ---------- ----------
Halococcus.morrh A-ACTACGA- -TTG--GTCG CCACTGGTGT A--CCGGTTG TCC-GAGA-- ---------- ---------- ---------- ---------- ----------
Natronobac.magad A-ACTACGA- -ATG--GGTG CCACTGGTGT A--CCGGCTG TTC-GAAA-- ---------- ---------- ---------- ---------- ----------
Methanococ.vanni A-ACGGGCC- -GTC--GGCG CCTCTAGTCG A--TCGGTTG TCT-GACA-- ---------- ---------- ---------- ---------- ----------
Methanococ.janna A-ACGAGCC- -GCC--GGCG CCTCTGGTCT A--CCGGTTG TCC-GACA-- ---------- ---------- ---------- ---------- ----------
Xenopus.laevi A-ACCGCAG- -GTT--CAGA CATTTGGTGT AT-GTGCTTG GCT-GAGG-- ---------- ---------- ---------- ---------- ----------
Homo.sapie A-ACCGCAG- -GTT--CAGA CATTTGGTGT AT-GTGCTTG GCT-GAGG-- ---------- ---------- ---------- ---------- ----------
Candida.albic A-ACCGTTC- -ATT--CAGA TAATTGGTTT TT-GCGGCTG TCT-GATC-- ---------- ---------- ---------- ---------- ----------
Saccharomy.cerev A-ACAGTTC- -ATT--CGGA TAATTGGTTT TT-GCGGCTG TCT-GATC-- ---------- ---------- ---------- ---------- ----------
Schizosacc.pombe A-ACCGTTG- -ATT--CAGA TCATTGGTAT TT-GCGGCTG CCT-GACA-- ---------- ---------- ---------- ---------- ----------
Oryza.sativ A-ACCGTTG- -ATT--CACA CAATTGGTCA TC-GCGCTTG GTT-GAAA-- ---------- ---------- ---------- ---------- ----------
Arabidopsi.thali A-ACCGTTG- -ATT--CGCA CAATTGGTCA TC-GCGCTTG GTT-GAAA-- ---------- ---------- ---------- ---------- ----------
Fragaria.anana A-ACCGTTG- -ATT--CGCA CAATTGGTCA TC-GCGCTTG GTT-GAAA-- ---------- ---------- ---------- ---------- ----------
Chlorella.ellip A-ACCGCCG- -ATT--CGGA TAATTGGTAA -T-GCGCTCG CCT-GAAA-- ---------- ---------- ---------- ---------- ----------
nEuglena.graci A-ACCCTTG- -TGG--CACT CCCCTGGTTT CC-ACCGTGA GTC-GAGC-- ---------- ---------- ---------- ---------- ----------
Entamoeba.histo A-ACCGTTG- -TGT--CACG CCACTGGATT AT-TCAATTA TTT-GATC-- ---------- ---------- ---------- ---------- ----------
nTrypanosom.bruce A-ACTCCCA- -TGC--CGTG CCTCTGGTTT CT-GGAGTTT GTC-GAAG-- ---------- ---------- ---------- ---------- ----------
Giardia.intes A-ACGCC-G- -CCG--CGGG CCGCCAGCCC C--GCGGTTG CCC-GGCC-- ---------- ---------- ---------- ---------- ----------
**** ************************
8501
Mycobacter.lepra ---------- ---------- ---------- ---------- ---------- ---------- --------GG GGCA--CCGC TGGATAGCCA --CGTTCGGA
Streptomyc.grise ---------- ---------- ---------- ---------- ---------- ---------- --------AG GGCA--TGGC TGGTTGGCTA --CGTTCGGA
Bacillus.subti ---------- ---------- ---------- ---------- ---------- ---------- --------AG GGCA--TCGC TGGGTAGCTA --TGTGCGGA
Lactobacil.delbr ---------- ---------- ---------- ---------- ---------- ---------- --------AA GGCA--TCGC TGGGTAGCTA --TGTGCGGA
Leuconosto.mesen ---------- ---------- ---------- ---------- ---------- ---------- --------GG AGCA--TTGC TGGGTAGCTA --TGTATGGA
Staphyloco.aureu ---------- ---------- ---------- ---------- ---------- ---------- --------AC GGCA--TAGC TGGGTAGCTA --TGTGTGGA
Bartonella.bacil ---------- ---------- ---------- ---------- ---------- ---------- --------GC CGCA--TAGC AGGGTAGCTA --TATACGGA
Rhodopseud.palus ---------- ---------- ---------- ---------- ---------- ---------- --------GC GGCA--GTGC AGCATAGCTA --TGTACGGA
Rickettsia.ricke ---------- ---------- ---------- ---------- ---------- ---------- --------AC GGCA--A-GC TGGGTAGCTA --AGTACGGA
Bordetella.bronc ---------- ---------- ---------- ---------- ---------- ---------- --------AT GGCA--TTGC CGGGTAGCTA --AGTACGGA
Escherichi.coli ---------- ---------- ---------- ---------- ---------- ---------- --------AT GGCA--CTGC CCGGTAGCTA --AATGCGGA
Haemophilu.influ ---------- ---------- ---------- ---------- ---------- ---------- --------GA CGCA--TTGC CGGGTAGCTA --AATGCGGA
Thermus.therm ---------- ---------- ---------- ---------- ---------- ---------- --------GG GGCA-TAAGC TGGGTAGCCA --TGTGCGGA
Thermotoga.marit ---------- ---------- ---------- ---------- ---------- ---------- --------GC GGCA-TACGC CGGGTAGCTA --CGCCCCTA
Zea.mays.CP ---------- ---------- ---------- ---------- ---------- ---------- --------AC GGTA-AACGC TGGGTAGCCA --AGTGTGGA
nChlamydomo.reinh.CP ---------- ---------- ---------- ---------- ---------- ---------- --------AT GGGA-AACGC TGGGTAGCTA --CGCATGGA
Euglena.graci.CP ---------- ---------- ---------- ---------- ---------- ---------- --------AC AGAA-TACGC TGGGTAGTCA --AGTGCGGA
Desulfuroc.mobil ---------- ---------- ---------- ---------- ---------- ---------- ---------G GGCA--ACGC CGGGCAGCCA --CGCCGCAA
Sulfolobus.acido ---------- ---------- ---------- ---------- ---------- ---------- ---------G GGCA--ATGC CGGGCAGCCG --CGCCCTGA
Thermofilu.pende ---------- ---------- ---------- ---------- ---------- ---------- ---------G GGCA--CTGC CGGGCAGCCA --CGCCGCAA
Thermoprot.tenax ---------- ---------- ---------- ---------- ---------- ---------- ---------A GGCA--CTGC CGGGCAGCCA --CGCCGTAG
Halobacter.halob ---------- ---------- ---------- ---------- ---------- ---------- ---------G GGCA-TGTGC CGAGCAGCTA --CGCACCAC
Halobacter.maris ---------- ---------- ---------- ---------- ---------- ---------- ---------G AGCA-CGTGC CGGGTAGCCA --CGCCACAC
Halococcus.morrh ---------- ---------- ---------- ---------- ---------- ---------- ---------G GGCA-CGTGC CGGGCAGCCA --CGCGACAC
Natronobac.magad ---------- ---------- ---------- ---------- ---------- ---------- ---------G AGCA-CGTGC CGGGCAGCCA --CGCACCAC
Methanococ.vanni ---------- ---------- ---------- ---------- ---------- ---------- ---------A GGCA--CTGC CGAGCAGCCA --CGCGCCAA
Methanococ.janna ---------- ---------- ---------- ---------- ---------- ---------- ---------G GGCA--TTGC CGGGCAGCTA --CGCGCTAA
Xenopus.laevi ---------- ---------- ---------- ---------- ---------- ---------- ---------A GCCA--ATGG GGCGAAGCTA -CCATCTGT-
Homo.sapie ---------- ---------- ---------- ---------- ---------- ---------- ---------A GCCA--ATGG GGCGAAGCTA -CCATCTGT-
Candida.albic ---------- ---------- ---------- ---------- ---------- ---------- ---------A GGCA---ACG CGCGAAGCTA -CCATCTGC-
Saccharomy.cerev ---------- ---------- ---------- ---------- ---------- ---------- ---------A GGCA--TTGC CGCGAAGC-A -CCATCCGC-
Schizosacc.pombe ---------- ---------- ---------- ---------- ---------- ---------- ---------A GGCA--ATGC CGCGGAGCTA -TCATCTGC-
Oryza.sativ ---------- ---------- ---------- ---------- ---------- ---------- ---------A GCCA--GTGG CGCGAAGCTA -CCGTGTGC-
Arabidopsi.thali ---------- ---------- ---------- ---------- ---------- ---------- ---------A GCCA--GTGG CGCGAAGCTA -CCGTGCGC-
Fragaria.anana ---------- ---------- ---------- ---------- ---------- ---------- ---------A GCCA--GTGG CGCGAAGCTA -CCGTGCGC-
Chlorella.ellip ---------- ---------- ---------- ---------- ---------- ---------- ---------A GGCG--TTGG CGCAACGCTA -CCATCCGT-
nEuglena.graci ---------- ---------- ---------- ---------- ---------- ---------- ---------G ACTG--GTGT AGTGAAGCTA -CCAAGTGA-
Entamoeba.histo ---------- ---------- ---------- ---------- ---------- ---------- ---------A AATA--GTGT TGAGAATCTA -ACACGTGTT
nTrypanosom.bruce ---------- ---------- ---------- ---------- ---------- ---------- ---------G GCAA--GTGC TCCGACGCTA -TCGCACGG-
Giardia.intes ---------- ---------- ---------- ---------- ---------- ---------- ---------G GGCA--GCGC CGCGCCGCCG --CGCCCGG-
**************************
8601
Mycobacter.lepra ---------- ---------- ----CAAGAT AACCGCT-GA AAGCATCT-A AGCGGGAAAC CT-TCTCCAA GA---TCAGG TTTCTTA-CC CA--------
Streptomyc.grise ---------- ---------- ----AAGGAT AACCGCT-GA AAGCATCT-A AGCGGGAAGC CT-GCTTCGA GA---TGAGT ATTCCCA-CC CT--------
Bacillus.subti ---------- ---------- ----CGGGAT AAGTGCT-GA AAGCATCT-A AGCATGAAGC CC-CCCTCAA GA---TGAGA TTTCCCA-TT CC--------
Lactobacil.delbr ---------- ---------- ----CGGGAT AAGCGCT-GA AAGCATCT-A AGTGCGAAGC CC-CCCTCAA GA---TGAGA TTTCCCA-TT TC--------
Leuconosto.mesen ---------- ---------- ----TGAGAT AAACGCT-GA AAGCATCT-A AGTGTGAAAC TC-GCCTCGA GA---TGAGA TTTCCCA-TC TA--------
Staphyloco.aureu ---------- ---------- ----CGGGAT AAGTGCT-GA AAGCATCT-A AGCATGAAGC CC-CCCTCAA GA---TGAGA TTTCCC---A AC--------
Bartonella.bacil ---------- ---------- ----CGGGAT AACCGCT-GA AGGCATCT-A AGCGGGAAAC CC-ACCTGAA AA---CGAGT ATTCCC---- ----------
Rhodopseud.palus ---------- ---------- ----CGGGAT AACCGCT-GA AAGCATCT-A AGCGGGAAAC CC-ACCTCAA AA---CGAGC ATTCCC---- ----------
Rickettsia.ricke ---------- ---------- ----AGGGAT AACTGCT-GA ATGCATCT-A AGCAGGAAAC CC-ACCTCAA AA---CTAGA CTTCCC---- ----------
Bordetella.bronc ---------- ---------- ----AGAGAT AACCGCT-GA AGGCATCT-A AGCGGGAAAC TC-GTCTGAA GA---TTAGG TATCCCG--G GGA-------
Escherichi.coli ---------- ---------- ----AGAGAT AAGTGCT-GA AAGCATCT-A AGCACGAAAC TT-GCCCCGA GA---TGAGT TCTCCCT-GA CCC-------
Haemophilu.influ ---------- ---------- ----AGAGAT AAGTGCT-GA AAGCATCT-A AGCACGAAAC TT-GCCAAGA GA---TGAGT CATCCCT-GA C---------
Thermus.therm ---------- ---------- ----AGGGAT AACCGCT-GA AAGCATCT-A AGCGGGAAGC CC-GCCCCAA GA---TGAGG CCTCCCA-CG GC--------
Thermotoga.marit ---------- ---------- ----AGCGAT AACCGCT-GA AAGCATCT-A AGCGGGAAGC GC-GCCCCAA GA---TTAGG CCTCCCA-TC CC--------
Zea.mays.CP ---------- ---------- ----GAGGAT AACTGCC-GA AAGCATAT-A AGTAGTAAGC CC-ACCCCAA GA---TGAGT GCTCTCTC-- ----------
nChlamydomo.reinh.CP ---------- ---------- -----TAGAT AACTGCT-GA AAGCATCT-A AGTAGGAAGC TA-AACTCAA GA---TGAGT GCTCTC---- ----------
Euglena.graci.CP ---------- ---------- ----GTGGAT AACTGCT-GA AAGCATAT-A AGTAGGAAGC CC-ACCTTAA GA---TAAGT ACTCTTC--- ----------
Desulfuroc.mobil ---------- ---------- -----GGGGT AACCGCT-GA AAGCATCT-A AGCGGGAACC CC-TCCCCGA AA---AGAGG CGGCCTGCCG TCACGG----
Sulfolobus.acido ---------- ---------- -----GGGGT AACCGCT-GA AAGCATCT-A AGCGGGAACC CC-TCCCCTA AA---AGAGG CGGTCA--GG C---------
Thermofilu.pende ---------- ---------- -----GGGGT AACCGCT-GA AGGCATCT-A AGCGGGAAAC CC-ACCCCGA GA---CGAGG CGGCCACTCC CGATCCGTT-
Thermoprot.tenax ---------- ---------- -----GGGAT AACCGCTTGA AAGCATCT-A AGCGGGAAGC TC-CCCCCGA GA---CGAGG CGGCCGTTGC CCTGGGGG--
Halobacter.halob ---------- ---------- -----GGGGT AAGAGCT-GA ATGCATCT-A AGCTCGAAAC CC-ACCTGGA AA---AGAAG CACCA----- ----------
Halobacter.maris ---------- ---------- -----GGGGT AAGAGCT-GA ACGCATCT-A AGCTCGAAAC CC-ACTTGGA AA---AGAGA CACCG----- ----------
Halococcus.morrh ---------- ---------- -----GGGGT AAGAGCT-GA ACGCATCT-A AGCTCGAAAC CC-ACCCGGA AA---AGAGG TACCG----- ----------
Natronobac.magad ---------- ---------- -----GGGGT AAGAGCT-GA ACGCATCT-A AGCTCGAAAC CC-ACCTGGA AA---AGAGG AGCCA----- ----------
Methanococ.vanni ---------- ---------- -----GAGAT AAGAGCT-GA AAGCATCT-A AGCTCGAAAT TC-ATCCTGA AA---ATAGA CAGCCG--TT TCC-------
Methanococ.janna ---------- ---------- -----GGGAT AAGGGCT-GA AGGCATCT-A AGCCCGAAAC CC-TCCCCGA AA---ATAGG CGGCCA--GT CCC-------
Xenopus.laevi ---------- ---------- -----GGGAT TATGACT-GA ACGCCTCT-A AGTCAGAATC CC-CCCTAAA C----GTGAC GATACCGCA- GCGCCGC-GG
Homo.sapie ---------- ---------- -----GGGAT TATGACT-GA ACGCCTCT-A AGTCAGAATC CC-GCCCAGG C-----GAAC GATACGGCA- GCGCCGC-GG
Candida.albic ---------- ---------- -----TGGAT TATGGCT-GA ACGCCTCT-A AGTCAGAATC CA-TGCTAGA AC---GCGAT GATTT--TTG CCCTGCACAT
Saccharomy.cerev ---------- ---------- -----TGGAT TATGGCT-GA ACGCCTCT-A AGTCAGAATC CA-TGCTAGA AC---GCGGT GATTTCTTTG CTCCACACAA
Schizosacc.pombe ---------- ---------- -----CGGAT AACGGCT-GA ACGCCTCT-A AGCCAGAATC CG-TGCCAGA AA---GCGAC GATTT-TTTG GTCCGCATGA
Oryza.sativ ---------- ---------- -----CGGAT TATGACT-GA ACGCCTCT-A AGTCAGAATC CA-AGCTAGC AA---GCGGC GCCTGC---- GCC-GACGCC
Arabidopsi.thali ---------- ---------- -----TGGAT TATGACT-GA ACGCCTCT-A AGTCAGAATC CG-GGCTAGA A----GCGAC GCATGC---- GCCCGCCGCC
Fragaria.anana ---------- ---------- -----TGGAT TATGACT-GA ACGCCTCT-A AGTCAGAATC CG-GGCTAGA A----GCGAC GCATGC---- GCCCGCCGCC
Chlorella.ellip ---------- ---------- -----AGTCT AACCGCT-GA ACGCCTCT-A AGCTGGAAGA CG-TGCTAGG T----GCGGA GTCACTTT-- TCCCAATGAT
nEuglena.graci ---------- ---------- -----CGGAT ACTGACT-GG ACGCATCTTA AGCCTGAATC CGAGACCAGG CCTACAGCAT GCCTGGGA-- GCATCGAGGC
Entamoeba.histo ---------- ---------- -----GAAAT AATGGCT-GA AAGCCTCTCA AGCCAGAATT TC-GTCTAGA -----TGAAT ACTTTGTCTT TTTCTTGTTA
nTrypanosom.bruce ---------- ---------- -----TGGTT CTCGGCT-GA ACGCCTCT-A AGCCAGAAAC CA-GTCCCAA GAC--CGGGT GCCCGTAAAA GCAAAAAGCA
Giardia.intes ---------- ---------- -----GGGCC CTGCGCT-GA CCGCCTCT-A AGCGCGCACC CC-GCCTCGC G-----CCCC GCCC------ GGCCGCGCGC
*********************************************
8701
Mycobacter.lepra ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Streptomyc.grise ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Bacillus.subti ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Lactobacil.delbr ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Leuconosto.mesen ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Staphyloco.aureu ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Bartonella.bacil ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Rhodopseud.palus ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Rickettsia.ricke ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Bordetella.bronc ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Escherichi.coli ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Haemophilu.influ ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Thermus.therm ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Thermotoga.marit ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Zea.mays.CP ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
nChlamydomo.reinh.CP ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Euglena.graci.CP ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Desulfuroc.mobil ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Sulfolobus.acido ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Thermofilu.pende -GCTCCCG-- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Thermoprot.tenax ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Halobacter.halob ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Halobacter.maris ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Halococcus.morrh ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Natronobac.magad ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Methanococ.vanni ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Methanococ.janna ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Xenopus.laevi AGCCTCGGTC GGCCTCGGAT -AGCCGGCGC CCCCCC--CG GGGGGCGCCG GCGG------ ---------- ---------- ---------- ----------
Homo.sapie AGCCTCGGTT GGCCTCGGAT -AGCCGGTCC CCCGCCTGTC CCCGCCGGCG GGCCGCCCCC CCCTCCACGC GCCCCGC--- ---CGCGGGA GGGCGCGTGC
Candida.albic TTTAGATGG- ---------- ------ATAC GAATAA---- GACT-TTTT- AGTC----GC TGGACCATAG CA-------- ---------- ----------
Saccharomy.cerev TATAGATGG- ---------- ------ATAC GAATAA--GG CGTC-CTTGT GGCGTC--GC TGAACCATAG CA-------- ---------- ----------
Schizosacc.pombe TTTATATGT- ---------- ------ATAA AAATA-GAGG TAGGACTTGT TCCTACTCTC CTGTATCGTA GAAGA----- ---------- ----------
Oryza.sativ CGCC--CCG- ---------- ------ACCC ACGTTA---- GGGC-GCAG- ACCCCC---A AGGGCCCGTG C--------- ---------- ----------
Arabidopsi.thali CGATTGCCG- ---------- ------ACCC TCAGTA---G GAGC-TTAG- GCTCC----A AAGGCACGTG T--------- ---------- ----------
Fragaria.anana CGTTTGCCG- ---------- ------ACCC GCAGTA---G GGGC-CTT-- GCCC----GA GGGGCACGTG T--------- ---------- ----------
Chlorella.ellip CGTAACCCG- ---------- ------ACTA CAGATA---G GCGT-GGCT- CGTCC----- ---------- ---------- ---------- ----------
nEuglena.graci AGAGCAGTAC CCTTCTGGGT CTGCGCCAAC ACCAACTGGA TCTGAACTGG C--------- ---------- ---------- ---------- ----------
Entamoeba.histo CTTTAGTACA ATTGAAAATT ATATAC---- ---------- ---------- ---------- ---------- ---------- ---------- ----------
nTrypanosom.bruce AAAAGAGAAA GAATAGGGAA AAATATAGTG TACATGTAAA GTGTGTTCCA TATATATATA TATATTCATT TATATAAGTG TGTGGGCACG GCTTGTGTGT
Giardia.intes CCCAGC---- ---------- ---------- ---------- ----CCCGT- ---------- ---------- ---------- ---------- ----------
8801
Mycobacter.lepra ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Streptomyc.grise ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Bacillus.subti ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Lactobacil.delbr ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Leuconosto.mesen ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Staphyloco.aureu ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Bartonella.bacil ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Rhodopseud.palus ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Rickettsia.ricke ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Bordetella.bronc ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Escherichi.coli ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Haemophilu.influ ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Thermus.therm ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Thermotoga.marit ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Zea.mays.CP ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
nChlamydomo.reinh.CP ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Euglena.graci.CP ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Desulfuroc.mobil ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Sulfolobus.acido ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Thermofilu.pende ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Thermoprot.tenax ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Halobacter.halob ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Halobacter.maris ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Halococcus.morrh ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Natronobac.magad ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Methanococ.vanni ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Methanococ.janna ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Xenopus.laevi ---------- ---------- ---------- -GCAGAGCCG CTCGCCTCGG GA-CCGGAGC GCGGAC-GAA AGGGGGCCGC CT-CTCTCCC GGAGCGCAC-
Homo.sapie CCCGCCGCGC GCCGGGACCG GGGTCCGGTG CGGAGTGCCC TTCGTCCTGG GAAACGGGGC GCGGCCGGAA AGGCGGCCGC CCCCTCGCCC GTCACGCAC-
Candida.albic ---------- ---------- ---------- ---------- ----GGCTGG CAACGGTGCG CTTAGCGGAA AG-GCTTTGT GCGCTTGCCG GC-----GGA
Saccharomy.cerev ---------- ---------- ---------- ---------- ----GGCTAG CAACGGTGCA CTTGGCGGAA AG-GCCTTGG GTGCTTGCTG GC-----GAA
Schizosacc.pombe ---------- ---------- ---------- ---------- -----TGGGC GATGGTTGAT G-AAACGGAA GT-GTTTTAT TGACT-TGTC CA----TGAA
Oryza.sativ ---------- ---------- ---------- ---------- -----CACCG GCCAAGCCCG GCCGGCCGAC GC-GCCGCGG CCGGCCGCCT T-----CGAA
Arabidopsi.thali ---------- ---------- ---------- ---------- -----CGTTG GCTAAGTCCG TTCGGCGGAA CG-GTCGTTC -GGACCGCCT T------GAA
Fragaria.anana ---------- ---------- ---------- ---------- -----CGTTG GCTAAGTCGC CGCGACGGAA GC-CGCAA-- --GGCCGCTT T------GAA
Chlorella.ellip ---------- ---------- ---------- ---------- -----ACGCC CAG-GAGCAT ACCCGA-TGG TG-TCTAGTT -CGCTAGCCC AT-----GCA
nEuglena.graci ---------- --------CG GAGTGATTGC CGGCACCGGA TGTGGTGTGC AGGCCTGCGA GATGGC--AA CA-TTGAGTG GGCAGGCTGC AA-----GCC
Entamoeba.histo ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----GTTGTA
nTrypanosom.bruce ATCTCTATAT GGCTCACTGA CGTTGA---- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Giardia.intes ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
8901
Mycobacter.lepra --------CT TGG------- -------TGG G-ATAAGGCC -CCCCG-CAG AACACGGGAT T--------- ---------- ---------- GATAGG-TCA
Streptomyc.grise --------CT TGA------- -------AGG G-TTAAGGCT -CCCAG-TAG ACGACTGGGT T--------- ---------- ---------- GATAGG-CCA
Bacillus.subti --------GC AA-------- -------GGA A-GTAAGATC -CCTGA-AAG ATGATCAGGT T--------- ---------- ---------- GATAGG-TCT
Lactobacil.delbr -------TTC AA-------- -------GAA A-GTAAGACA -CCTCA-GAG ACGATGAGGT A--------- ---------- ---------- GATAGG-CCG
Leuconosto.mesen -------TTT AA-------- -------TAG A-GTAAGACC -CCTTA-GAG ATGATGAGGT A--------- ---------- ---------- GATAGG-CTA
Staphyloco.aureu --------TT CG-------- -------GTT --ATAAGATC -CCTCA-AAG ATGATGAGGT T--------- ---------- ---------- AATAGG-TTC
Bartonella.bacil ---------- ---------- ---------- --TTGAGAAC -CGTGG-TAG ACCACCACGT T--------- ---------- ---------- GATAGG-TCA
Rhodopseud.palus ---------- ---------- ---------- --TTGAGAAC -CGTGG-AAG ACCACCACGT T--------- ---------- ---------- GATAGG-CCG
Rickettsia.ricke ---------- ---------- ---------- -CATTAGAGC -CGTGG-AAG ACCACCACGT T--------- ---------- ---------- GATAGG-TCG
Bordetella.bronc --------CT AGA------- ------TCCC CCTGAAGGGT -CGTTC-GAG ACCAGGACGT T--------- ---------- ---------- GATAGG-TCG
Escherichi.coli --------TT TAA------- ------GGGT CCTGAAGGAA -CGTTG-AAG ACGACGACGT T--------- ---------- ---------- GATAGG-CCG
Haemophilu.influ --------TT TAA------- --------GT CAGTAAGGGT -TGTTG-TAG ACTACGACGT A--------- ---------- ---------- GATAGG-TTG
Thermus.therm --------GT CAA------- -------GCC G-GTAAGGAC -CCGGG-AAG ACCACCCGGT G--------- ---------- ---------- GATGGG-CCG
Thermotoga.marit --------GT TAA------- -------GGG A-GTAAGGCC -GGTCC-GAG AAGAGGACCT T--------- ---------- ---------- GATAGG-CCG
Zea.mays.CP ---------- ---------- ---------- --CTAAGGTA -GCGGC-GAG ACGAGCCGTT TA-------- ---------- ---------- AATAGG-TGT
nChlamydomo.reinh.CP ---------- ---------- ---------- ---TAAGGCC -GCGGC-TAG ACAAGCCGTT A--------- ---------- ---------- TATAGG-TAT
Euglena.graci.CP ---------- ---------- ---------- ---ATAGGTC -ACGGT-AAG ACGAACCGTT T--------- ---------- ---------- GATAGG-TAT
Desulfuroc.mobil --------GT TA-------- ---CCGTGGC G-GCGCGGGC -TCCCG-TAG AAGACGGGGT T--------- ---------- ---------- GATGGG-GCG
Sulfolobus.acido --------GT TA-------- --------GC C-GGG-GCCT -TCCCC-TAG AAGAGGGGGT T--------- ---------- ---------- GATGGG-GTG
Thermofilu.pende --------GC GA-CGGGGGC TTTGGGTCGG G-ACGAGGGC -ACCCG-TAG AAGACGGGGT T--------- ---------- ---------- GATGGG-GTG
Thermoprot.tenax --------GC AA-------- -CCCCTGGGG C-ACGAGGGC -TCCCG-TAG AAGACGGGGT T--------- ---------- ---------- GATGGG-GGG
Halobacter.halob ---------- ---------- ---------- --CTGAGACC -GCTCG-TAG AAGACGAGTT C--------- ---------- ---------- GATAGA-CTT
Halobacter.maris ---------- ---------- ---------- --CCGAGGTC -CCGCG-TAC AAGACGCGGT C--------- ---------- ---------- GATAGA-CTC
Halococcus.morrh ---------- ---------- ---------- --CCGAGGTC -ACTCG-TAG AAGACGAGTT C--------- ---------- ---------- GATAGA-CTC
Natronobac.magad ---------- ---------- ---------- --CCGAGGCC -ACTCG-TAG AAGACGAGAT C--------- ---------- ---------- GATAGA-CTC
Methanococ.vanni ---------T TC-------- ------GGGA A--CGAGAAC -TCCCG-TAG AAGACGGGTT T--------- ---------- ---------- GATAGG-CTA
Methanococ.janna ---------T TC-------- ------GGGG A--CGAGGGC -TCTCC-TAT AAGAGGAGGT T--------- ---------- ---------- GATAGG-CCG
Xenopus.laevi -CGCACGTT- ----CGTGGG GAACCTGGTG CT---AAATC -ATTCG-TAG ACGACCTGAT T--------- ---------- ---------- CTGGGTCAGG
Homo.sapie -CGCACGTT- ----CGTGGG GAACCTGGCG CT---AAACC -ATTCG-TAG ACGACCTGCT T--------- ---------- ---------- CTGGGTCGGG
Candida.albic TA-GCAA--- ----TGTCAA CATGCGCGGG GAT--AAATC -CTTTG-CAT ACGACTTAGA T--------- ---------- ---------- GTACAACGGA
Saccharomy.cerev TT-GCAA--- ----TGTCAT TTTGCGTGGG GAT--AAATC -ATTTG-TAT ACGACTTAGA T--------- ---------- ---------- GTACAACGGG
Schizosacc.pombe ATTCCAT--- ----TGAAAT CTTGTGCGGA ATC--GAATC -CATTG-CAT ACGACTTTAA T--------- ---------- ---------- GTGGAACGGG
Oryza.sativ GCTCCCTT-- ----CCCAAC GGGCGGCGGG CT---GAATC -CTTTG-CAG ACGACTTAAA T--------- ---------- ---------- ACGCGACGGG
Arabidopsi.thali TTATAATT-- ----ACCACC GAGCGGCGGG TA---GAATC -CTTTG-CAG ACGACTTAAA T--------- ---------- ---------- ACGCGACGGG
Fragaria.anana TTACAATT-- ----TCTACC GAGCGGCGGG TA---GAATC --TTTG-CAG ACGACTTAAA T--------- ---------- ---------- ACGCGACGGG
Chlorella.ellip TGGCAATT-- ----CCATTC GTTCATTGGG GT---AAATC -CCTTG-CAG ACGACTTGGC ---------- ---------- ---------- -TCGAACCCG
nEuglena.graci TCCTGCC--- ----GGTCGG ACAAACAGAC CA---ACACC -CCGCC-CAG ACCAGGCTGG ---------- ---------- ---------- --ATCTGCGG
Entamoeba.histo TTTATTATC- ----TCGTGT ATTACTCTAT CA---AAAGG -GT-AG-T-G AATACT-GAG T--------- ---------- ---------- --TAAC--AA
nTrypanosom.bruce AGGGAATGCA AAAGTGTATA ATAATACTAC ATATGCGTGT GTATATTTAT TACTTTGTAT TTCTGTGTGA GACGTGGTTT GTGTGCGGGC ATATACGTAT
Giardia.intes -------GC- ----CCCGTC GCCGAGCGGC CC----CCGC -CCGGG-GAG ACCACCCGG- ---------- ---------- ---------- ---CGCGGCG
9001
Mycobacter.lepra GACC-TAG-A AGCTCA---- ---------- ---------- ---------- ---GTAA--- -----T-GAG T-GTAGGGA- --ACTGGC-- -ACTAACTGG
Streptomyc.grise GATG-TGG-A AGCCCG---- ---------- ---------- ---------- ---GTAA--- -----C-GGG T-GGAGCTG- --ACTGGT-- -ACTAATAGG
Bacillus.subti GAGG-TGG-A AGTGTG---- ---------- ---------- ---------- ---GCGA--- -----C-ACA T-GGAGCTG- --ACAGAT-- -ACTAATCGA
Lactobacil.delbr GGAG-TGG-A AGAGCC---- ---------- ---------- ---------- ---GTGA--- -----G-GCT T-GGAGCGG- --ACCGGT-- -ACTAATCAG
Leuconosto.mesen GAAG-TGG-A AGTTGA---- ---------- ---------- ---------- ---GTGA--- -----T-CAA T-GGAGCGG- --ACTAGT-- -ACTAATAGG
Staphyloco.aureu GAGG-TGG-A AGCATG---- ---------- ---------- ---------- ---GTGA--- -----C-ATG T-GGAGCTG- --ACGAAT-- -ACTAATCGA
Bartonella.bacil GGCG-TGG-A AGTGTG---- ---------- ---------- ---------- ---GTAA--- -----C-ACA T-GAAGCTT- --ACTGAT-- -ACTAATAGT
Rhodopseud.palus GATG-TGG-A AGTGCG---- ---------- ---------- ---------- ---ACAA--- -----T-ACA TGTCAGTT-- --ACCGGT-- -ACTAATCGT
Rickettsia.ricke GGTG-TGG-A AGCACA---- ---------- ---------- ---------- ---GTAA--- -----T-GTG T-GTAGCTA- --ACCGAT-- -ACTAATAGC
Bordetella.bronc GGTG-TGG-A AGCGCA---- ---------- ---------- ---------- ---GTAA--- -----T-GCG T-TAAGCTA- --ACCGAT-- -ACTAATTGC
Escherichi.coli GGTG-TGT-A AGCGCA---- ---------- ---------- ---------- ---GCGA--- -----T-GCG T-TGAGCTA- --ACCGGT-- -ACTAATGAA
Haemophilu.influ GGTG-TGT-A AGTGAT---- ---------- ---------- ---------- ---GTGA--- -----G-TCA T-TGAGCTA- --ACCAAT-- -ACTAATTGC
Thermus.therm GGGG-TGT-A AGCGCC---- ---------- ---------- ---------- ---GCGA--- -----G-GCG T-TGAGCCG- --ACCGGT-- -CCCAATCGT
Thermotoga.marit GGGG-TGT-A AGCGCC---- ---------- ---------- ---------- ---GCAA--- -----G-GCG T-TGAGCCC- --ACCGGT-- -ACTAATCGG
Zea.mays.CP CAAG-TGG-A AGTGCA---- ---------- ---------- ---------- ---GTGA--- -----T-GTA T-GCAGCTG- --AGGCAT-- -CCTAA-CGA
nChlamydomo.reinh.CP CAGG-TGT-A CAGTCA---- ---------- ---------- ---------- ---GCAA--- -----T-GGC T-TTAGCCG- --AGATAT-- -ACTAA-AGG
Euglena.graci.CP TAGG-TGT-A CAATTG---- ---------- ---------- ---------- ---GTAA--- -----C-AAT T-TTAGCCG- --AGATAT-- -ACTAACCGA
Desulfuroc.mobil GGGG-TGT-A AGCCCAAGGG G--------- ---------- ---------- ---TTA---- CCCGAG-GGG T-TCAGCCC- --GCCGCT-- -CCCAAGAGC
Sulfolobus.acido GGGA-TGT-A AGCTCCAAGG TT-------- ---------- ---------- ---GTAA--G ACCGAG-GAG T-TTAGTCC- --GCCACT-- -CCCAATCAG
Thermofilu.pende GCGG-TGT-A TGCGCCGAGG ---------- ---------- ---------- ---GTTT--- -CCGAG-GCG C--GAGCCG- --GCCACT-- -CCCAATAGC
Thermoprot.tenax GCGG-TGT-A ACCCCCGAGG G--------- ---------- ---------- ---TCT---- CCCGAG-GGG G--GAGCCG- --GCCCCT-- -CCCAATCGC
Halobacter.halob GGGG-TGT-A CGCGTCGAG- ---------- ---------- ---------- ---GCAA--- --CGAG-ACG T-TTAGCCC- --GCGAGT-- -ACTAACAGG
Halobacter.maris GGGG-TGT-G CGCGTCGAG- ---------- ---------- ---------- ---GTAA--- --CGAG-ACG T-TAAGCCC- --ACGAGC-- -ACTAACAGA
Halococcus.morrh GGGG-TGT-A CGCGCCGAG- ---------- ---------- ---------- ---GCAA--- --CGAG-GCG T-TTAGCCC- --GCGAGC-- -ACTAACAGA
Natronobac.magad GGGG-TGT-A CGCGCCAAG- ---------- ---------- ---------- ---GCAA--- --CGAG-GCG T-TGAGCCC- --GCGAGC-- -ACTAATCGG
Methanococ.vanni GGGG-TGT-A CGCATCAAGG ---------- ---------- ---------- ---TTCTT-- -CCGAG-ATG T-TCAGCCC- --GCTAGT-- -ACTAACAGT
Methanococ.janna GGGG-TGT-A AGCGCCGAGG ---------- ---------- ---------- ---GCTTT-- -GCCCG-AGG ---------- ---------- ----------
Xenopus.laevi GTTT-CGT-G CGTAG-CAGA GCAGCT-ACC TC-------- ---------- --------GC TGCGAT-CTA T-TGAAAGTC A-TCCCT--T GAGCCAAGCT
Homo.sapie GTTT-CGT-A CGTAG-CAGA GCAGCT-CCC TC-------- ---------- --------GC TGCGAT-CTA T-TGAAAGTC A-GCCCT--C GACACAAGGG
Candida.albic GTAT-TGT-A AGCAG-TAGA GTAGCC-TTG TT-------- ---------- --------GT TACGAT-CTG C-TGAGATTA A-GCTCT--T GTTGTC-TGA
Saccharomy.cerev GTAT-TGT-A AGCGG-TAGA GTAGCC-TTG TT-------- ---------- --------GT TACGAT-CTG C-TGAGATTA A-GCCTT--T GTTGTC-TGA
Schizosacc.pombe GTAT-TGT-A AGCAG-TAGA GTAGCC-TTG TT-------- ---------- --------GT TACGAT-CTG C-TGAGATTA A-GCCTT--T GTOOOOOOOO
Oryza.sativ GCAT-TGT-A AGTGG-CAGA GTGGCC-TTG CT-------- ---------- --------GC CACGAT-CCA C-TGAGATCC A-GTCCCCGC GTCGCACGGA
Arabidopsi.thali GTAT-TGT-A AGTGG-CAGA GTGGCC-TTG CT-------- ---------- --------GC CACGAT-CCA C-TGAGATTC A-GCCCTT-T GTCGCTAAGA
Fragaria.anana GTAT-TGT-A AGTGG-CAGA GTGGCC-TTG CT-------- ---------- --------GC CACGAT-CCA C-TGAGATTC A-GCGCTG-C GTCGCTTCGA
Chlorella.ellip GTAT-TGT-A AGCGG-TAGA GTGGCC-TTG CT-------- ---------- --------GC TACGAT-CCG C-TGAGATTC A-GCCGTG-G TTCGG-AAGA
nEuglena.graci CGAG-TGT-A AGTGTTCAGA GGTTA--TTG T--------- ---------- ---------- -CCGAT-CCG T-TGAGCTCC AAGGCCGGGC TTCTGCAGGG
Entamoeba.histo A-AT-TTA-A AGCAT-AACT GTTGC--TTA ---------- ---------- --------TA GACGAT-GGC A-TCAGAA-- --ATCGGT-- GT-WGTAAGC
nTrypanosom.bruce ATAAATGCTC TTTATACCTC CGTCTCTTCC GGTTGTCTGT TCACGCTCAA GACAAAAAAA ACATATTCGA AACGAATATT ATCTCGAATC GCCACTTCTC
Giardia.intes CTCC-TGT-A CGGCG-CAGA GC-----CCT ---------- ---------- ---------- -GCGAT-CGC C-TGAGGGAC G-CGCCTG-- -CAGAGCGCG
9101
Mycobacter.lepra CCG--AAAGC TTACAAAA-- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Streptomyc.grise CCG--AGGGC TTGTCCTC-- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Bacillus.subti TCG--AGGAC TTAACCAT-- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Lactobacil.delbr TCG--AGGAC TTGACCAA-- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Leuconosto.mesen TCG--AGGAC TTAACCAA-- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Staphyloco.aureu TCG--AAGAC TTAATCAA-- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Bartonella.bacil TCG-ATTGGC TTGATCGTTC TCATTT---- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Rhodopseud.palus TCG-ATTGGC TTGATTGCTC TCATTAT--- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Rickettsia.ricke TCG-ATTGAT TTACTTTG-- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Bordetella.bronc CCG-TGAGGC TTAATCCTAT AACTCTCAAG ---------- ---------- ---------- ---------- ---------- ---------- ----------
Escherichi.coli CCG-TGAGGC TTAACCTT-- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Haemophilu.influ CCG-AGAGGC TTAAC----- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Thermus.therm CCG--AGGTC TTGACCCCTC ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Thermotoga.marit CCG--AGGCC TTGACCTCC- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Zea.mays.CP ACG-AACGAT TTGAAC---- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
nChlamydomo.reinh.CP CCGTTTGATT TTGACCTT-- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Euglena.graci.CP CCGA--AAAT TTTTTCC--- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Desulfuroc.mobil CCG----AAC GCCG------ ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Sulfolobus.acido GCT---CCCC CCTGGT---- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Thermofilu.pende CCG----AGG C--------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Thermoprot.tenax CCG---AGCG TGCG-GACGG CGGGCGAAAG A--------- ---------- ---------- ---------- ---------- ---------- ----------
Halobacter.halob TCA----ATG CCACAC---- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Halobacter.maris CCA----AAG CCATCA---- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Halococcus.morrh CCG-----AG CCACAT---- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Natronobac.magad CC-----AAG CCACAC---- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Methanococ.vanni TCG---AGAG ATAA------ ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Methanococ.janna ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Xenopus.laevi TTTGTC---- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Homo.sapie TTTGTC---- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Candida.albic TTTG------ ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Saccharomy.cerev TTTGT----- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Schizosacc.pombe OOOOO----- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Oryza.sativ TTCGT----- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Arabidopsi.thali TTCGA----- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Fragaria.anana TTCGT----- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Chlorella.ellip TTTTC----- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
nEuglena.graci AGTGGCTTCG GCTGCCCCTG CTGGGGCCGA CCTGACAGAG TGGGTG---- ---------- ---------- ---------- ---------- ----------
Entamoeba.histo TT-------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
nTrypanosom.bruce TTATCTGGTG GGCTCTGCCC GCCCTTGTCG GCGCCCAGTA CCTTCATTTT CACAAGATCT ---------- ---------- ---------- ----------
Giardia.intes GGGCGGGGCG CGCGGCCCAC TTGCTCTGGG GGGGTGCGGG GCAGACAGAC AGGCAGAGCG CGGAAAGAGA AGATTGAGGG AGTGCAGGGT GCCCCAAGGG
9201
Mycobacter.lepra ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Streptomyc.grise ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Bacillus.subti ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Lactobacil.delbr ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Leuconosto.mesen ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Staphyloco.aureu ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Bartonella.bacil ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Rhodopseud.palus ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Rickettsia.ricke ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Bordetella.bronc ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Escherichi.coli ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Haemophilu.influ ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Thermus.therm ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Thermotoga.marit ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Zea.mays.CP ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
nChlamydomo.reinh.CP ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Euglena.graci.CP ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Desulfuroc.mobil ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Sulfolobus.acido ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Thermofilu.pende ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Thermoprot.tenax ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Halobacter.halob ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Halobacter.maris ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Halococcus.morrh ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Natronobac.magad ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Methanococ.vanni ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Methanococ.janna ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Xenopus.laevi ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Homo.sapie ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Candida.albic ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Saccharomy.cerev ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Schizosacc.pombe ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Oryza.sativ ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Arabidopsi.thali ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Fragaria.anana ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Chlorella.ellip ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
nEuglena.graci ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Entamoeba.histo ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
nTrypanosom.bruce ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
Giardia.intes GTGGCCAGGG GGCAGTGCAC GCCCACCACC GGGTCTGCCT TGCACAGAGA GACGCCCGTG TGCGCAGGGG GGCGGCGCAG GACCGCAGGG GGCCCGGGGG
9301
Mycobacter.lepra ---------- -----
Streptomyc.grise ---------- -----
Bacillus.subti ---------- -----
Lactobacil.delbr ---------- -----
Leuconosto.mesen ---------- -----
Staphyloco.aureu ---------- -----
Bartonella.bacil ---------- -----
Rhodopseud.palus ---------- -----
Rickettsia.ricke ---------- -----
Bordetella.bronc ---------- -----
Escherichi.coli ---------- -----
Haemophilu.influ ---------- -----
Thermus.therm ---------- -----
Thermotoga.marit ---------- -----
Zea.mays.CP ---------- -----
nChlamydomo.reinh.CP ---------- -----
Euglena.graci.CP ---------- -----
Desulfuroc.mobil ---------- -----
Sulfolobus.acido ---------- -----
Thermofilu.pende ---------- -----
Thermoprot.tenax ---------- -----
Halobacter.halob ---------- -----
Halobacter.maris ---------- -----
Halococcus.morrh ---------- -----
Natronobac.magad ---------- -----
Methanococ.vanni ---------- -----
Methanococ.janna ---------- -----
Xenopus.laevi ---------- -----
Homo.sapie ---------- -----
Candida.albic ---------- -----
Saccharomy.cerev ---------- -----
Schizosacc.pombe ---------- -----
Oryza.sativ ---------- -----
Arabidopsi.thali ---------- -----
Fragaria.anana ---------- -----
Chlorella.ellip ---------- -----
nEuglena.graci ---------- -----
Entamoeba.histo ---------- -----
nTrypanosom.bruce ---------- -----
Giardia.intes AGGCGGCCCG GGGGA