CCfield that gives the number of the family the sequence belongs to:
CC -!- GENE_FAMILY: HBG017522.This number is incorporated in the keywords associated to the corresponding entry in the ACNUC database structure. Due to that fact it is possible to retrieve all the sequences associated to a family with this number when using the retrieval system Query or the on-line version WWW-Query.
We also add data on the localization of
domains that are found in a given entry. These data are integrated in the
FT PRODOM begin end domain_ID domain_# FT PRODOM 2 44 p99.1_24658 3 FT PRODOM 45 361 p99.1_8718 8 FT PRODOM 362 398 p99.1_133440 1 FT PRODOM 399 494 p99.1_9971 7The prefix of domain_ID (p99.1) indicates the PRODOM release from which these annotations were derived. The suffix (e.g. 24658) indicates the identifier of the domain in the corresponding PRODOM release. The domain_# indicates the number of occurence of this domain in the PRODOM database. Soon these features will be available as subsequences under the ACNUC structure.
Note: An other type of annotation is present in HOVERGEN. This annotation is relative to the use of a duplicated SWISSPROT-TrEMBL database:
CC -!- modified from 143G_HUMAN.
FT /gene_family="HBG017522"We also include in HOVERGEN descriptions of non-coding regions:
FT 3'ncr 2278..2368These subsequences can be selected and extracted from the database in the same way as CDS, using WWW-Query (see Help).
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