Score E
Sequences producing significant alignments: (bits) Value
gi|7506374|pir||T23986 hypothetical protein R06F6.8b - Caen... 27 1.6
gi|2496987|sp|Q09417|YRM8_CAEEL HYPOTHETICAL 216.3 KD PROTE... 27 1.6
gi|7508135|pir||T28709 hypothetical protein T21D12.3 - Caen... 25 7.3
gi|7498454|pir||T20485 hypothetical protein F01G4.4 - Caeno... 25 7.6
gi|7522609|pir||JE0286 insulin-like protein 1 [imported] - ... 25 8.0
gi|3025290|sp|Q20085|YPS7_CAEEL PUTATIVE SERINE/THREONINE-P... 24 13
gi|7498877|pir||T20754 hypothetical protein F11A5.10 - Caen... 24 14
gi|7506418|pir||T32133 hypothetical protein R07C3.13 - Caen... 23 16
gi|7495681|pir||T32338 hypothetical protein C08F1.5 - Caeno... 23 16
gi|7331764|gb|AAF60452.1| (AC006726) Hypothetical protein Y... 23 22
gi|7510133|pir||T27107 hypothetical protein Y52B11A.3 - Cae... 23 22
gi|6425395|emb|CAB60508.1| (AL132860) contains similarity t... 23 23
gi|6425409|emb|CAB60522.1| (AL132860) contains similarity t... 23 33
gi|7503664|pir||T34288 hypothetical protein F47C12.1 - Caen... 23 34
gi|7508572|pir||T25352 hypothetical protein T27C5.9 - Caeno... 22 36
gi|14518442|gb|AAB37646.2| (U80439) Hypothetical protein C0... 22 40
gi|7495155|pir||T29265 hypothetical protein C01G8.7 - Caeno... 22 40
gi|13559608|gb|AAK29820.1| (U70852) Hypothetical protein F4... 22 40
gi|7510364|pir||T27292 hypothetical protein Y66A7A.2 - Caen... 22 50
gi|1871447|dbj|BAA08309.1| (D45899) ryanodine receptor [Cae... 22 51
gi|6425396|emb|CAB60509.1| (AL132860) contains similarity t... 22 51
gi|7511513|pir||T29144 partial CDS - Caenorhabditis elegans... 22 51
gi|7505859|pir||T23642 hypothetical protein M01B2.10 - Caen... 22 55
gi|7509092|pir||T26257 hypothetical protein W07A12.6 - Caen... 22 58
gi|7511575|pir||T19048 probable Pro-X carboxypeptidase F23B... 22 64
gi|7435594|pir||T33463 probable serine carboxypeptidase (EC... 22 65
gi|7500031|pir||T34061 hypothetical protein F28B3.1 - Caeno... 22 70
gi|15718275|emb|CAB60338.2| (AL110482) contains similarity ... 21 80
gi|7508380|pir||T33672 hypothetical protein T24C4.6 - Caeno... 21 82
gi|7509435|pir||T26495 hypothetical protein Y17G7B.2a - Cae... 21 88
gi|7509436|pir||T26514 hypothetical protein Y17G7B.2b - Cae... 21 88
gi|7509437|pir||T26515 hypothetical protein Y17G7B.2c - Cae... 21 92
gi|7497613|pir||T15171 hypothetical protein C48E7.6 - Caeno... 21 93
gi|7510655|pir||T25970 hypothetical protein ZC239.12 - Caen... 21 95
gi|7509719|pir||T26770 hypothetical protein Y39G8B.e - Caen... 21 95
gi|14670231|gb|AAB66070.2| (AF016664) Hypothetical protein ... 21 96
gi|7498216|pir||T31976 hypothetical protein D2062.10 - Caen... 21 96
gi|7498225|pir||T31975 hypothetical protein D2062.9 - Caeno... 21 96
Alignments
>gi|7506374|pir||T23986 hypothetical protein R06F6.8b - Caenorhabditis elegans
gi|3878911|emb|CAA86785.1| (Z46794) cDNA EST yk366h10.5 comes from this gene~cDNA EST CEESZ41F
comes from this gene [Caenorhabditis elegans]
Length = 1943
Score = 26.9 bits (58), Expect = 1.6
Identities = 9/17 (52%), Positives = 12/17 (69%)
Query: 31 CGSHLVEALYLVCGERG 47
C SHL AL++ CG +G
Sbjct: 1185 CSSHLSNALWIACGAKG 1201
>gi|2496987|sp|Q09417|YRM8_CAEEL HYPOTHETICAL 216.3 KD PROTEIN R06F6.8 IN CHROMOSOME II
gi|7506373|pir||T23979 hypothetical protein R06F6.8a - Caenorhabditis elegans
gi|3878904|emb|CAA86778.1| (Z46794) cDNA EST EMBL:T01654 comes from this gene~cDNA EST yk21h11.5
comes from this gene~cDNA EST yk10g9.5 comes from this
gene~cDNA EST yk21h11.3 comes from this gene~cDNA EST
yk10g9.3 comes from this gene~cDNA EST yk47c1.3 comes
from this gene~cDNA>
Length = 1941
Score = 26.9 bits (58), Expect = 1.6
Identities = 9/17 (52%), Positives = 12/17 (69%)
Query: 31 CGSHLVEALYLVCGERG 47
C SHL AL++ CG +G
Sbjct: 1185 CSSHLSNALWIACGAKG 1201
>gi|7508135|pir||T28709 hypothetical protein T21D12.3 - Caenorhabditis elegans
gi|2315829|gb|AAC48091.1| (AF016687) Hypothetical protein T21D12.3 [Caenorhabditis elegans]
Length = 297
Score = 24.6 bits (52), Expect = 7.3
Identities = 14/28 (50%), Positives = 16/28 (57%)
Query: 79 PLALEGSLQKRGIVEQCCTSICSLYQLE 106
P AL LQKRGIV+Q I Y+ E
Sbjct: 4 PPALLARLQKRGIVKQEEEVIAENYEKE 31
>gi|7498454|pir||T20485 hypothetical protein F01G4.4 - Caenorhabditis elegans
gi|3875460|emb|CAA92765.1| (Z68341) predicted using Genefinder~cDNA EST yk17g2.3 comes from
this gene~cDNA EST yk17g2.5 comes from this gene~cDNA
EST yk167g7.3 comes from this gene~cDNA EST yk167g7.5
comes from this gene [Caenorhabditis elegans]
Length = 644
Score = 24.6 bits (52), Expect = 7.6
Identities = 11/27 (40%), Positives = 16/27 (58%)
Query: 65 QVELGGGPGAGSLQPLALEGSLQKRGI 91
+V LGG AG L+P E ++Q R +
Sbjct: 575 EVVLGGERAAGQLRPRGPESTIQPRRV 601
>gi|7522609|pir||JE0286 insulin-like protein 1 [imported] - Caenorhabditis elegans
gi|3220259|gb|AAC33275.1| (AF070472) insulin-like peptide [Caenorhabditis elegans]
gi|14530429|emb|CAC42282.1| (Z70683) cDNA EST EMBL:AF070472 comes from this gene
[Caenorhabditis elegans]
Length = 109
Score = 24.6 bits (52), Expect = 8.0
Identities = 23/81 (28%), Positives = 31/81 (37%), Gaps = 12/81 (14%)
Query: 30 LCGSHLVEALYLVCGERGFFYTPKTRREAEDLQVGQVELGGGPGAGSLQPLALEGSLQKR 89
LCGS L L VC + +R A+ A + + L QKR
Sbjct: 34 LCGSRLTTTLLAVCRNQLCTGLTAFKRSADQ-----------SYAPTTRDLFHIHHQQKR 82
Query: 90 -GIVEQCCTSICSLYQLENYC 109
GI +CC CS L+ +C
Sbjct: 83 GGIATECCEKRCSFAYLKTFC 103
>gi|3025290|sp|Q20085|YPS7_CAEEL PUTATIVE SERINE/THREONINE-PROTEIN KINASE F35H8.7 IN CHROMOSOME II
gi|7500576|pir||T21824 hypothetical protein F35H8.7 - Caenorhabditis elegans
gi|3876755|emb|CAA85329.1| (Z36752) similar to the conserved catalytic domains of ser/thr
protein kinases with high similarity to the S.Pombe Wee1
protein kinase, contains similarity to Pfam domain:
PF00069 (Eukaryotic protein kinase domain), Score=127.9,
E-value=6.1e-35, N=2 [C>
Length = 468
Score = 23.9 bits (50), Expect = 13
Identities = 14/49 (28%), Positives = 22/49 (44%)
Query: 59 EDLQVGQVELGGGPGAGSLQPLALEGSLQKRGIVEQCCTSICSLYQLEN 107
E L++ + E+ P QP++ + G E C+SI L EN
Sbjct: 358 EKLRIRKQEVEHIPSESQFQPISYLTTESPLGSRESSCSSIDFLDHFEN 406
>gi|7498877|pir||T20754 hypothetical protein F11A5.10 - Caenorhabditis elegans
Length = 495
Score = 23.9 bits (50), Expect = 14
Identities = 13/41 (31%), Positives = 20/41 (48%)
Query: 25 FVNQHLCGSHLVEALYLVCGERGFFYTPKTRREAEDLQVGQ 65
FV +HL GSH V ++ G +T RE ++ + Q
Sbjct: 378 FVVRHLPGSHYVYLTVVLLGMNPALVEARTEREKAEIPLLQ 418
>gi|7506418|pir||T32133 hypothetical protein R07C3.13 - Caenorhabditis elegans
gi|2315823|gb|AAB66242.1| (AF016686) R07C3.13 gene product [Caenorhabditis elegans]
Length = 300
Score = 23.5 bits (49), Expect = 16
Identities = 8/20 (40%), Positives = 13/20 (65%)
Query: 43 CGERGFFYTPKTRREAEDLQ 62
C +RG FY +++ A +LQ
Sbjct: 192 CEDRGNFYLTNSKKHASELQ 211
>gi|7495681|pir||T32338 hypothetical protein C08F1.5 - Caenorhabditis elegans
gi|13592305|gb|AAK31404.1| (AF025453) Hypothetical protein C08F1.5 [Caenorhabditis elegans]
Length = 1369
Score = 23.5 bits (49), Expect = 16
Identities = 14/47 (29%), Positives = 24/47 (50%), Gaps = 2/47 (4%)
Query: 26 VNQHLCGSHLVEALYLVCGERGFFYTPK--TRREAEDLQVGQVELGG 70
+ H+ +EA+ + GE FF+T K +R E ++Q G + G
Sbjct: 588 IEVHVQNLEFLEAMLIDRGEVSFFHTVKNVSRLEENEVQFGDSKACG 634
>gi|7331764|gb|AAF60452.1| (AC006726) Hypothetical protein Y23B4A.2 [Caenorhabditis elegans]
Length = 86
Score = 23.1 bits (48), Expect = 22
Identities = 7/10 (70%), Positives = 9/10 (90%)
Query: 44 GERGFFYTPK 53
G+R FFYTP+
Sbjct: 74 GKRAFFYTPR 83
>gi|7510133|pir||T27107 hypothetical protein Y52B11A.3 - Caenorhabditis elegans
gi|3881161|emb|CAA21721.1| (AL032654) contains similarity to Pfam domain: PF00173
(Heme-binding domain in cytochrome b5 and
oxidoreductases), Score=28.8, E-value=8.7e-07, N=1~cDNA
EST yk553h10.5 comes from this gene [Caenorhabditis
elegans]
Length = 541
Score = 23.1 bits (48), Expect = 22
Identities = 10/30 (33%), Positives = 15/30 (49%)
Query: 42 VCGERGFFYTPKTRREAEDLQVGQVELGGG 71
+CG GF KT E+ +L Q+ + G
Sbjct: 512 ICGPDGFILAAKTALESLNLHSDQIHIFQG 541
>gi|6425395|emb|CAB60508.1| (AL132860) contains similarity to Pfam domain: PF00646 (F-box
domain.), Score=39.9, E-value=1.9e-08, N=1~cDNA EST
EMBL:T01740 comes from this gene [Caenorhabditis
elegans]
Length = 300
Score = 23.1 bits (48), Expect = 23
Identities = 11/25 (44%), Positives = 14/25 (56%)
Query: 77 LQPLALEGSLQKRGIVEQCCTSICS 101
L L+ SL+ G+VE C SI S
Sbjct: 11 LPDFVLQKSLKLMGVVEHLCLSILS 35
>gi|6425409|emb|CAB60522.1| (AL132860) contains similarity to Pfam domain: PF00646 (F-box
domain.), Score=40.8, E-value=9.8e-09, N=1
[Caenorhabditis elegans]
Length = 300
Score = 22.7 bits (47), Expect = 33
Identities = 10/20 (50%), Positives = 13/20 (65%)
Query: 82 LEGSLQKRGIVEQCCTSICS 101
L+ SL+ G+VE C SI S
Sbjct: 16 LQKSLKLMGVVEHLCLSILS 35
>gi|7503664|pir||T34288 hypothetical protein F47C12.1 - Caenorhabditis elegans
gi|1397258|gb|AAC24388.1| (U61946) Hypothetical protein F47C12.1 [Caenorhabditis elegans]
Length = 1827
Score = 22.7 bits (47), Expect = 34
Identities = 19/70 (27%), Positives = 28/70 (39%), Gaps = 9/70 (12%)
Query: 36 VEALYLVCGERGFFYTPKTRREAEDLQVGQ-------VELGGGPGAGSLQPLALEGSLQK 88
VE +Y CGE G + P + A + Q +E G G G GS+ ++
Sbjct: 324 VETVY--CGELGKWGIPPACKAATCQPLAQFSNGDRRLEFGDGTGYGSVFRFDCHSGYRR 381
Query: 89 RGIVEQCCTS 98
G+ C S
Sbjct: 382 EGVESSLCKS 391
>gi|7508572|pir||T25352 hypothetical protein T27C5.9 - Caenorhabditis elegans
gi|3880272|emb|CAB04870.1| (Z82058) contains similarity to Pfam domain: PF00078 (Reverse
transcriptase (RNA-dependent DNA polymerase)),
Score=121.6, E-value=4.6e-33, N=1 [Caenorhabditis
elegans]
Length = 1638
Score = 22.3 bits (46), Expect = 36
Identities = 17/55 (30%), Positives = 25/55 (44%), Gaps = 2/55 (3%)
Query: 45 ERGFFYTPKTRREAEDLQVGQVELGG--GPGAGSLQPLALEGSLQKRGIVEQCCT 97
E GF + K+ + L + LG P SL+ L ++GS+ I E C T
Sbjct: 1535 ETGFAHLRKSGTKLTVLPIIIGSLGSWWKPTGDSLKELGIKGSVINSAIPELCAT 1589
>gi|14518442|gb|AAB37646.2| (U80439) Hypothetical protein C01G8.9 [Caenorhabditis elegans]
Length = 1761
Score = 22.3 bits (46), Expect = 40
Identities = 12/34 (35%), Positives = 15/34 (43%)
Query: 51 TPKTRREAEDLQVGQVELGGGPGAGSLQPLALEG 84
TP + + L V + GG AGS P A G
Sbjct: 655 TPASASASTTLHVEPASVAGGSQAGSRAPSAGPG 688
>gi|7495155|pir||T29265 hypothetical protein C01G8.7 - Caenorhabditis elegans
Length = 1357
Score = 22.3 bits (46), Expect = 40
Identities = 12/34 (35%), Positives = 15/34 (43%)
Query: 51 TPKTRREAEDLQVGQVELGGGPGAGSLQPLALEG 84
TP + + L V + GG AGS P A G
Sbjct: 251 TPASASASTTLHVEPASVAGGSQAGSRAPSAGPG 284
>gi|13559608|gb|AAK29820.1| (U70852) Hypothetical protein F45E4.10a [Caenorhabditis elegans]
Length = 772
Score = 22.3 bits (46), Expect = 40
Identities = 5/21 (23%), Positives = 14/21 (65%)
Query: 86 LQKRGIVEQCCTSICSLYQLE 106
++K +++ CC+++C + E
Sbjct: 7 IRKNRMMKPCCSTVCEMSHFE 27
>gi|7510364|pir||T27292 hypothetical protein Y66A7A.2 - Caenorhabditis elegans
gi|3881216|emb|CAA21502.1| (AL032622) predicted using Genefinder [Caenorhabditis elegans]
gi|13548487|emb|CAC35866.1| (AL590343) predicted using Genefinder [Caenorhabditis elegans]
Length = 158
Score = 21.9 bits (45), Expect = 50
Identities = 6/25 (24%), Positives = 17/25 (68%)
Query: 33 SHLVEALYLVCGERGFFYTPKTRRE 57
+ L+EA++ +CG+ ++ + R++
Sbjct: 129 TQLLEAIHQICGQPARIFSDEQRKD 153
>gi|1871447|dbj|BAA08309.1| (D45899) ryanodine receptor [Caenorhabditis elegans]
Length = 5071
Score = 21.9 bits (45), Expect = 51
Identities = 9/18 (50%), Positives = 12/18 (66%)
Query: 30 LCGSHLVEALYLVCGERG 47
+CG LV A+ L G+RG
Sbjct: 1188 VCGDGLVPAMTLGSGQRG 1205
>gi|6425396|emb|CAB60509.1| (AL132860) contains similarity to Pfam domain: PF00646 (F-box
domain.), Score=51.4, E-value=6.4e-12, N=1
[Caenorhabditis elegans]
Length = 292
Score = 21.9 bits (45), Expect = 51
Identities = 9/20 (45%), Positives = 13/20 (65%)
Query: 82 LEGSLQKRGIVEQCCTSICS 101
L+ SL+ G+VE C S+ S
Sbjct: 16 LQKSLKLMGVVEHLCLSVLS 35
>gi|7511513|pir||T29144 partial CDS - Caenorhabditis elegans
gi|1658365|gb|AAB18318.1| (U64854) Hypothetical protein K11C4.5 [Caenorhabditis elegans]
Length = 5107
Score = 21.9 bits (45), Expect = 51
Identities = 9/18 (50%), Positives = 12/18 (66%)
Query: 30 LCGSHLVEALYLVCGERG 47
+CG LV A+ L G+RG
Sbjct: 1095 VCGDGLVPAMTLGSGQRG 1112
>gi|7505859|pir||T23642 hypothetical protein M01B2.10 - Caenorhabditis elegans
gi|3878609|emb|CAB05567.1| (Z83116) M01B2.10 [Caenorhabditis elegans]
Length = 397
Score = 21.9 bits (45), Expect = 55
Identities = 9/23 (39%), Positives = 13/23 (56%)
Query: 84 GSLQKRGIVEQCCTSICSLYQLE 106
G+ + G+ C IC+LY LE
Sbjct: 374 GTSRINGLDNNKCCEICNLYPLE 396
>gi|7509092|pir||T26257 hypothetical protein W07A12.6 - Caenorhabditis elegans
gi|3880579|emb|CAA92707.1| (Z68320) W07A12.6 [Caenorhabditis elegans]
Length = 399
Score = 21.9 bits (45), Expect = 58
Identities = 12/30 (40%), Positives = 15/30 (50%)
Query: 80 LALEGSLQKRGIVEQCCTSICSLYQLENYC 109
L+L KRGIV T I S++ YC
Sbjct: 240 LSLLHKSPKRGIVLTITTIIASMFIRAGYC 269
>gi|7511575|pir||T19048 probable Pro-X carboxypeptidase F23B2.12 - Caenorhabditis elegans
gi|3874098|emb|CAA92588.1| (Z68295) similar to lysosomal carboxypeptidase~cDNA EST yk47a8.3
comes from this gene~cDNA EST yk52c6.3 comes from this
gene~cDNA EST yk47a8.5 comes from this gene~cDNA EST
yk52c6.5 comes from this gene~cDNA EST yk351b11.3 comes
from this gene~cDNA EST>
gi|3876284|emb|CAB05187.1| (Z82266) similar to lysosomal carboxypeptidase~cDNA EST yk47a8.3
comes from this gene~cDNA EST yk52c6.3 comes from this
gene~cDNA EST yk47a8.5 comes from this gene~cDNA EST
yk52c6.5 comes from this gene~cDNA EST yk351b11.3 comes
from this gene~cDNA EST>
Length = 1080
Score = 21.6 bits (44), Expect = 64
Identities = 8/12 (66%), Positives = 9/12 (74%)
Query: 40 YLVCGERGFFYT 51
Y VC E G+FYT
Sbjct: 356 YQVCTEFGWFYT 367
>gi|7435594|pir||T33463 probable serine carboxypeptidase (EC 3.4.16.-) Y40D12A.2
precursor - Caenorhabditis elegans
gi|3329641|gb|AAC26946.1| (AF078792) similar to serine carboxypeptidase (Pfam:
serine_carbpept.hmm, score: 311.29) [Caenorhabditis
elegans]
Length = 512
Score = 21.6 bits (44), Expect = 65
Identities = 8/16 (50%), Positives = 11/16 (68%)
Query: 68 LGGGPGAGSLQPLALE 83
L GGPG S++ L +E
Sbjct: 69 LNGGPGCASMEGLFIE 84
>gi|7500031|pir||T34061 hypothetical protein F28B3.1 - Caenorhabditis elegans
gi|13384440|gb|AAK21373.1| (AF003136) Hypothetical protein F28B3.1 [Caenorhabditis elegans]
Length = 1394
Score = 21.6 bits (44), Expect = 70
Identities = 13/47 (27%), Positives = 23/47 (48%)
Query: 35 LVEALYLVCGERGFFYTPKTRREAEDLQVGQVELGGGPGAGSLQPLA 81
L+E+ L+ G + P+TR + D +G++ + A L LA
Sbjct: 1175 LIESGKLLPGVKIAIANPETRGQCADSHLGEIWVASIHNASPLNRLA 1221
>gi|15718275|emb|CAB60338.2| (AL110482) contains similarity to Pfam domain: PF00069 (Eukaryotic
protein kinase domain), Score=59.9, E-value=5.2e-16, N=1
[Caenorhabditis elegans]
Length = 704
Score = 21.2 bits (43), Expect = 80
Identities = 9/18 (50%), Positives = 13/18 (72%)
Query: 53 KTRREAEDLQVGQVELGG 70
K REAEDL++ ++L G
Sbjct: 525 KLSREAEDLRLEDMDLPG 542
>gi|7508380|pir||T33672 hypothetical protein T24C4.6 - Caenorhabditis elegans
gi|3800912|gb|AAC68925.1| (AF100306) similar human ZYG homologue (GB:X99802) [Caenorhabditis
elegans]
Length = 1008
Score = 21.2 bits (43), Expect = 82
Identities = 6/19 (31%), Positives = 13/19 (67%)
Query: 82 LEGSLQKRGIVEQCCTSIC 100
+E ++++ +V CC S+C
Sbjct: 579 MEVHMEEQVMVRNCCLSLC 597
>gi|7509435|pir||T26495 hypothetical protein Y17G7B.2a - Caenorhabditis elegans
gi|3947597|emb|CAA19449.1| (AL023828) Y17G7B.2a [Caenorhabditis elegans]
Length = 570
Score = 21.2 bits (43), Expect = 88
Identities = 9/23 (39%), Positives = 13/23 (56%)
Query: 35 LVEALYLVCGERGFFYTPKTRRE 57
L + LYLV E + P+ +RE
Sbjct: 532 LSDMLYLVSKEVNLDHPPRVKRE 554
>gi|7509436|pir||T26514 hypothetical protein Y17G7B.2b - Caenorhabditis elegans
gi|3947616|emb|CAA19468.1| (AL023828) cDNA EST yk24g6.5 comes from this gene [Caenorhabditis
elegans]
Length = 572
Score = 21.2 bits (43), Expect = 88
Identities = 9/23 (39%), Positives = 13/23 (56%)
Query: 35 LVEALYLVCGERGFFYTPKTRRE 57
L + LYLV E + P+ +RE
Sbjct: 534 LSDMLYLVSKEVNLDHPPRVKRE 556
>gi|7509437|pir||T26515 hypothetical protein Y17G7B.2c - Caenorhabditis elegans
gi|3947617|emb|CAA19469.1| (AL023828) cDNA EST yk84e10.5 comes from this gene~cDNA EST
yk470e5.3 comes from this gene~cDNA EST yk470e5.5 comes
from this gene~cDNA EST yk508f9.5 comes from this gene
[Caenorhabditis elegans]
Length = 462
Score = 21.2 bits (43), Expect = 92
Identities = 9/23 (39%), Positives = 13/23 (56%)
Query: 35 LVEALYLVCGERGFFYTPKTRRE 57
L + LYLV E + P+ +RE
Sbjct: 424 LSDMLYLVSKEVNLDHPPRVKRE 446
>gi|7497613|pir||T15171 hypothetical protein C48E7.6 - Caenorhabditis elegans
gi|13384426|gb|AAK21360.1| (AF000262) similar to rat chondroitin sulfate proteoglycan NG2
precursor (SP:Q00657) [Caenorhabditis elegans]
Length = 1764
Score = 21.2 bits (43), Expect = 93
Identities = 8/22 (36%), Positives = 15/22 (67%)
Query: 57 EAEDLQVGQVELGGGPGAGSLQ 78
+A D ++ +E+G P AG+L+
Sbjct: 1184 DAVDKEIVMIEIGTEPRAGTLE 1205
>gi|7510655|pir||T25970 hypothetical protein ZC239.12 - Caenorhabditis elegans
gi|1707212|gb|AAB37951.1| (U80842) Hypothetical protein ZC239.12 [Caenorhabditis elegans]
Length = 244
Score = 21.2 bits (43), Expect = 95
Identities = 7/21 (33%), Positives = 12/21 (56%)
Query: 88 KRGIVEQCCTSICSLYQLENY 108
K G++E C S C + ++Y
Sbjct: 93 KEGLMELCKRSTCKMRTFDSY 113
>gi|7509719|pir||T26770 hypothetical protein Y39G8B.e - Caenorhabditis elegans
Length = 1006
Score = 21.2 bits (43), Expect = 95
Identities = 9/18 (50%), Positives = 13/18 (72%)
Query: 53 KTRREAEDLQVGQVELGG 70
K REAEDL++ ++L G
Sbjct: 547 KLSREAEDLRLEDMDLPG 564
>gi|14670231|gb|AAB66070.2| (AF016664) Hypothetical protein D2062.9 [Caenorhabditis elegans]
Length = 324
Score = 21.2 bits (43), Expect = 96
Identities = 6/18 (33%), Positives = 13/18 (71%)
Query: 26 VNQHLCGSHLVEALYLVC 43
+N+H+ ++ ALY++C
Sbjct: 124 LNKHILSKCVINALYVLC 141
>gi|7498216|pir||T31976 hypothetical protein D2062.10 - Caenorhabditis elegans
Length = 311
Score = 21.2 bits (43), Expect = 96
Identities = 6/18 (33%), Positives = 13/18 (71%)
Query: 26 VNQHLCGSHLVEALYLVC 43
+N+H+ ++ ALY++C
Sbjct: 14 LNKHILSKCVINALYVLC 31
>gi|7498225|pir||T31975 hypothetical protein D2062.9 - Caenorhabditis elegans
Length = 507
Score = 21.2 bits (43), Expect = 96
Identities = 6/18 (33%), Positives = 13/18 (71%)
Query: 26 VNQHLCGSHLVEALYLVC 43
+N+H+ ++ ALY++C
Sbjct: 149 LNKHILSKCVINALYVLC 166
Database: nr
Posted date: Oct 1, 2001 12:31 AM
Number of letters in database: 242,984,850
Number of sequences in database: 0
Lambda K H
0.322 0.141 0.438
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,914,403
Number of Sequences: 0
Number of extensions: 66709
Number of successful extensions: 120
Number of sequences better than 100.0: 59
Number of HSP's better than 100.0 without gapping: 57
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 61
Number of HSP's gapped (non-prelim): 60
length of query: 110
length of database: 10,604,135
effective HSP length: 86
effective length of query: 24
effective length of database: 8,592,079
effective search space: 206209896
effective search space used: 206209896
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 43 (21.2 bits)
