Nucleotide	Protein	Translations	Retrieve results for an RID

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		Set subsequence	From: To:
		Choose database	nr Drosophila genome
		Do CD-Search
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		Options	for advanced blasting
		Limit by entrez query	or select from:(none) Viruses [ORGN] Archaea [ORGN] Bacteria [ORGN] Eukaryota [ORGN] Viridiplantae [ORGN] Fungi [ORGN] Metazoa [ORGN] Arthropoda [ORGN] Vertebrata [ORGN] Mammalia [ORGN] Rodentia [ORGN] Primates [ORGN] ------------------- Aeropyrum pernix [ORGN] Aquifex aeolicus [ORGN] Arabidopsis thaliana [ORGN] Bacillus subtilis [ORGN] Bos taurus [ORGN] Caenorhabditis elegans [ORGN] Danio rerio [ORGN] Dictyostelium discoideum [ORGN] Drosophila melanogaster [ORGN] Escherichia coli [ORGN] Gallus gallus [ORGN] Homo sapiens [ORGN] Human immunodeficiency virus type 1 [ORGN] Methanococcus jannaschii [ORGN] Mus musculus [ORGN] Oryctolagus cuniculus [ORGN] Oryza sativa [ORGN] Ovis aries [ORGN] Plasmodium falciparum [ORGN] Rattus norvegicus [ORGN] Saccharomyces cerevisiae [ORGN] Schizosaccharomyces pombe [ORGN] Simian immunodeficiency virus [ORGN] Synechocystis PCC6803 [ORGN] Takifugu rubripes [ORGN] Xenopus laevis [ORGN] Zea mays [ORGN]
		Composition-based statistics
		Choose filter	Low complexity Mask for lookup table onlyMask lower case
		Expect
		Word Size	2 3
		Matrix	PAM30 PAM70 BLOSUM80 BLOSUM62 BLOSUM45 Gap Costs Existence: 9 Extension: 2 Existence: 8 Extension: 2 Existence: 7 Extension: 2 Existence: 12 Extension: 1 Existence: 11 Extension: 1 Existence: 10 Extension: 1
		PSSM
		Other advanced
		PHI pattern

		Format
		Show	Graphical OverviewNCBI-giAlignment PSSM Bioseq in HTML Plain text ASN.1 XML format
		Number of:	Descriptions0 10 50 100 250 500 1000 Alignments0 10 50 100 250 500 1000
		Alignment view	Pairwise query-anchored with identities query-anchored without identities flat query-anchored with identities flat query-anchored without identities Hit Table
		Format for PSI-BLAST	with inclusion threshold:
		Limit results by entrez query	or select from:(none) Viruses [ORGN] Archaea [ORGN] Bacteria [ORGN] Eukaryota [ORGN] Viridiplantae [ORGN] Fungi [ORGN] Metazoa [ORGN] Arthropoda [ORGN] Vertebrata [ORGN] Mammalia [ORGN] Rodentia [ORGN] Primates [ORGN] ------------------- Aeropyrum pernix [ORGN] Aquifex aeolicus [ORGN] Arabidopsis thaliana [ORGN] Bacillus subtilis [ORGN] Bos taurus [ORGN] Caenorhabditis elegans [ORGN] Danio rerio [ORGN] Dictyostelium discoideum [ORGN] Drosophila melanogaster [ORGN] Escherichia coli [ORGN] Gallus gallus [ORGN] Homo sapiens [ORGN] Human immunodeficiency virus type 1 [ORGN] Methanococcus jannaschii [ORGN] Mus musculus [ORGN] Oryctolagus cuniculus [ORGN] Oryza sativa [ORGN] Ovis aries [ORGN] Plasmodium falciparum [ORGN] Rattus norvegicus [ORGN] Saccharomyces cerevisiae [ORGN] Schizosaccharomyces pombe [ORGN] Simian immunodeficiency virus [ORGN] Synechocystis PCC6803 [ORGN] Takifugu rubripes [ORGN] Xenopus laevis [ORGN] Zea mays [ORGN]
		Expect value range:
		Layout:	One Window Two Windows Formatting options on page with results: None At the top At the bottom
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