gc_object_start: gene_grailexp --organism human --output pretty --nodb --dbpat grailexp_v3 

# Service: gene_grailexp
# Version: 3.0
# Description: GAT GrailEXP Gene Prediction Service
# Last Modified: December 4, 2000
# Tool:  GrailEXP 3.2 from ORNL.  Last updated:  February, 2001.
# Database:  GrailEXP EST/mRNA Database Feb/2001 from NCBI/Baylor/TIGR (7058810 entries).  Last updated:  February 8, 2001.
# Sequence Name: >gene_grailexp|PID=22737
# Sequence Length: 3864
# Output_begin: pretty
--------------------------------------------------------------------------------
GrailEXP v3.2                                  http://compbio.ornl.gov/grailexp/

Authors:  Doug Hyatt, Manesh Shah, Victor Olman, Richard Mural, Ying Xu, and 
  Edward C. Uberbacher, 1996-2001

Reference:  "Automated Gene Identification in Large-Scale Genomic Sequences",
  Xu, Y. and Uberbacher, E.C., Journal of Computational Biology, Volume 4,
  Number 3, 1997

Sequence:  >gene_grailexp|PID=22737 (3864 bp)
--------------------------------------------------------------------------------
GAWAIN Gene Predictions (0 predicted, 0 with database similarity)



Genes with Database Similarity (0 predicted, 0 with alternative splices)




Genes with No Database Evidence (0 predicted)


--------------------------------------------------------------------------------
PERCEVAL Exon Candidates (2 predicted)

 Index Std   Begin       End     Frm    Type     Len    Scr    Quality

      1 +       1867       2070   1   Internal    204    83        Good
      2 +       3541       3621   1   Internal     81    52    Marginal
--------------------------------------------------------------------------------
# Output_end: pretty

gc_object_end: gene_grailexp --organism human --output pretty --nodb --dbpat grailexp_v3 

gc_object_start: cpg_grailexp --output pretty

# Service: cpg_grailexp
# Version: 3.0
# Description: GAT GrailEXP CpG Island Locator
# Last Modified: December 4, 2000
# Tool:  GrailEXP 3.2 from ORNL.  Last updated:  February, 2001.
# Sequence Name: >cpg_grailexp|PID=24354
# Sequence Length: 3864
# Output_begin: pretty
--------------------------------------------------------------------------------
GrailEXP v3.2                                  http://compbio.ornl.gov/grailexp/

Authors:  Doug Hyatt, Manesh Shah, Victor Olman, Richard Mural, Ying Xu, and 
  Edward C. Uberbacher, 1996-2001

Reference:  "Automated Gene Identification in Large-Scale Genomic Sequences",
  Xu, Y. and Uberbacher, E.C., Journal of Computational Biology, Volume 4,
  Number 3, 1997

Sequence:  >cpg_grailexp|PID=24354 (3864 bp)
--------------------------------------------------------------------------------
PERCEVAL CpG Islands (0 predicted)

--------------------------------------------------------------------------------
# Output_end: pretty

gc_object_end: cpg_grailexp --output pretty