Number of segment pairs = 3422; number of pairwise comparisons = 973
'+' means given segment; '-' means reverse complement
Overlaps Containments No. of Constraints Supporting Overlap
******************* Contig 1 ********************
gi|20216847|gb|AJ449626.1|AJ449626+
gi|20216891|gb|AJ449670.1|AJ449670+ is in gi|20216847|gb|AJ449626.1|AJ449626+
gi|7127370|gb|AJ395940.1|AJ395940+ is in gi|20216847|gb|AJ449626.1|AJ449626+
gi|46300945|gb|CN221603.1|CN221603+
gi|32279955|gb|CD729106.1|CD729106+ is in gi|46300945|gb|CN221603.1|CN221603+
gi|14004221|gb|BG710271.1|BG710271+ is in gi|46300945|gb|CN221603.1|CN221603+
gi|25905144|gb|BU412473.1|BU412473+
******************* Contig 2 ********************
gi|15083164|gb|BI389882.1|BI389882+
gi|14471962|gb|BI064440.1|BI064440+ is in gi|15083164|gb|BI389882.1|BI389882+
gi|5882902|gb|AI979874.1|AI979874+ is in gi|14471962|gb|BI064440.1|BI064440+
gi|25906981|gb|BU414310.1|BU414310+
gi|14472975|gb|BI065453.1|BI065453+ is in gi|25906981|gb|BU414310.1|BU414310+
gi|32277798|gb|CD726951.1|CD726951+ is in gi|14472975|gb|BI065453.1|BI065453+
gi|13675523|gb|BG625010.1|BG625010+ is in gi|25906981|gb|BU414310.1|BU414310+
gi|32373861|gb|CD761636.1|CD761636+ is in gi|25906981|gb|BU414310.1|BU414310+
gi|25337670|gb|BU126548.1|BU126548+ is in gi|25906981|gb|BU414310.1|BU414310+
gi|25349987|gb|BU136575.1|BU136575+
gi|41331211|gb|CK610153.1|CK610153+ is in gi|25349987|gb|BU136575.1|BU136575+
gi|32288938|gb|CD738089.1|CD738089+ is in gi|25349987|gb|BU136575.1|BU136575+
gi|13192342|gb|AL587308.1|AL587308+ is in gi|25349987|gb|BU136575.1|BU136575+
gi|27591949|gb|CB017213.1|CB017213+
gi|33491161|gb|CF257906.1|CF257906+
gi|32287204|gb|CD736355.1|CD736355+ is in gi|33491161|gb|CF257906.1|CF257906+
gi|25848797|gb|BU340796.1|BU340796+ is in gi|33491161|gb|CF257906.1|CF257906+
gi|25848172|gb|BU340171.1|BU340171+ is in gi|25848797|gb|BU340796.1|BU340796+
gi|25529269|gb|BU261576.1|BU261576+ is in gi|25848797|gb|BU340796.1|BU340796+
gi|25895934|gb|BU387933.1|BU387933+
gi|32286662|gb|CD735813.1|CD735813+ is in gi|25895934|gb|BU387933.1|BU387933+
gi|25328512|gb|BU119505.1|BU119505+
gi|28594847|gb|BX272246.1|BX272246+ is in gi|25328512|gb|BU119505.1|BU119505+
gi|25862694|gb|BU354693.1|BU354693+ is in gi|25328512|gb|BU119505.1|BU119505+
gi|28585438|gb|BX262840.1|BX262840+ is in gi|25862694|gb|BU354693.1|BU354693+
gi|28589005|gb|BX266407.1|BX266407+
gi|25858518|gb|BU350517.1|BU350517+ is in gi|28589005|gb|BX266407.1|BX266407+
gi|25945855|gb|BU456544.1|BU456544+ is in gi|28589005|gb|BX266407.1|BX266407+
gi|25494212|gb|BU246692.1|BU246692+ is in gi|28589005|gb|BX266407.1|BX266407+
gi|25753639|gb|BU303924.1|BU303924+ is in gi|28589005|gb|BX266407.1|BX266407+
gi|25742223|gb|BU292767.1|BU292767+ is in gi|28589005|gb|BX266407.1|BX266407+
gi|25966977|gb|BU473400.1|BU473400+ is in gi|28589005|gb|BX266407.1|BX266407+
gi|25965517|gb|BU471940.1|BU471940+ is in gi|28589005|gb|BX266407.1|BX266407+
gi|41331966|gb|CK610908.1|CK610908+ is in gi|28589005|gb|BX266407.1|BX266407+
gi|25829674|gb|BU321673.1|BU321673+ is in gi|28589005|gb|BX266407.1|BX266407+
gi|25767238|gb|BU398182.1|BU398182+ is in gi|28589005|gb|BX266407.1|BX266407+
gi|25871604|gb|BU363603.1|BU363603+ is in gi|28589005|gb|BX266407.1|BX266407+
gi|25853302|gb|BU345301.1|BU345301+ is in gi|28589005|gb|BX266407.1|BX266407+
gi|13163699|gb|AL584966.1|AL584966+ is in gi|28589005|gb|BX266407.1|BX266407+
gi|25516018|gb|BU256762.1|BU256762+
gi|25863519|gb|BU355518.1|BU355518+
gi|28585716|gb|BX263118.1|BX263118+ is in gi|25863519|gb|BU355518.1|BU355518+
gi|13192056|gb|AL587022.1|AL587022+ is in gi|28585716|gb|BX263118.1|BX263118+
gi|25964859|gb|BU471282.1|BU471282+
gi|28594846|gb|BX272245.1|BX272245- is in gi|25964859|gb|BU471282.1|BU471282+
gi|28589004|gb|BX266406.1|BX266406- is in gi|25964859|gb|BU471282.1|BU471282+
gi|25835882|gb|BU327881.1|BU327881+ is in gi|28589004|gb|BX266406.1|BX266406-
gi|25390361|gb|BU214338.1|BU214338+ is in gi|28589004|gb|BX266406.1|BX266406-
gi|7130413|gb|AJ397456.1|AJ397456+ is in gi|28589004|gb|BX266406.1|BX266406-
gi|28585437|gb|BX262839.1|BX262839- is in gi|28589004|gb|BX266406.1|BX266406-
gi|28585715|gb|BX263117.1|BX263117- is in gi|25964859|gb|BU471282.1|BU471282+
DETAILED DISPLAY OF CONTIGS
******************* Contig 1 ********************
. : . : . : . : . : . :
gi|20216847|gb|AJ449+ GGTCCCGTGCGGCTAAGGGAGCGAGCGGCGCGCGCCGCGGCCGTCCGTCAGTGAGAGCCG
gi|20216891|gb|AJ449+ GGGAGCGAGCGGCGCGCGCCGCGGCCGTCCGTCAGTGAGAGCCG
gi|46300945|gb|CN221+ GGGAGCGAGCGGCGCGCGCCGCGGCCGTCCGTCAGTGAGAGCCG
gi|32279955|gb|CD729+ G
gi|14004221|gb|BG710+ GGGAGCGAGCGGCGCGCGCCGCGGCCGTCCGTCAGTGAGAGCCG
gi|25905144|gb|BU412+ GCGGCGCGCGCCGCGGCCGTCCGTCAGTGAGAGCCG
____________________________________________________________
consensus GGTCCCGTGCGGCTAAGGGAGCGAGCGGCGCGCGCCGCGGCCGTCCGTCAGTGAGAGCCG
. : . : . : . : . : . :
gi|20216847|gb|AJ449+ TTCGTGAGGGCCCGCAGCGCCGCCGCCATGGCCGAAGCTGATATTGCGTTGATCGGACTG
gi|20216891|gb|AJ449+ TTCGTGAGGGCCCGCAGCGCCGCCGCCATGGCCGAAGCTGATATTGCGTTGATCGGACTG
gi|7127370|gb|AJ3959+ CGTGAGGGCCCGCAGCGCCGCCGCCATGGCCGAAGCTGATATTGCGTTGATCGGACTG
gi|46300945|gb|CN221+ TCCGTGAGGGCCCGCAGCGCCGCCGCCATGGCCGAAGCTGATATTGCGTTGATCGGACTG
gi|32279955|gb|CD729+ TCCGTGAGGGCCCGCAGCGCCGCCGCCATGGCCGAAGCTGATATTGCGTTGATCGGACTG
gi|14004221|gb|BG710+ TCCGTGAGGGCCCGCAGCGCCGCCGCCATGGCCGAAGCTGATATTGCGTTGATCGGACTG
gi|25905144|gb|BU412+ TCCGTGAGGGCCCGCAGCGCCGCCGCCATGGCCGAAGCTGATATTGCATTGATCGGACTG
____________________________________________________________
consensus TCCGTGAGGGCCCGCAGCGCCGCCGCCATGGCCGAAGCTGATATTGCGTTGATCGGACTG
. : . : . : . : . : . :
gi|20216847|gb|AJ449+ GCCGTGATGGGTCAGAACCTGATTCTGAACATGAACGATCACGGCTTCGTGGTCTGCGCT
gi|20216891|gb|AJ449+ GCCGTGATGGGTCAGAACCTGATTCTGAACATGAACGATCACGGCTTCGTGGTCTGCGCT
gi|7127370|gb|AJ3959+ GCCGTGATGGGTCAGAACCTGATTCTGAACATGAACGATCACGGCTTCGTGGTCTGCGCT
gi|46300945|gb|CN221+ GCCGTGATGGGTCAGAACCTGATTCTGAACATGAACGATCACGGCTTCGTGGTCTGCGCT
gi|32279955|gb|CD729+ GCCGTGATGGGTCTGAACCTGATTCTGAACATGAACGATCACGGCTTCGTGGTCTGCGCT
gi|14004221|gb|BG710+ GCCGTGATGGGTCAGAACCTGATTCTGAACATGAACGATCACGGCTTCGTGGTCTGCGCT
gi|25905144|gb|BU412+ GCCGTGATGGGTCAGAACCTGATTCTGAACATGAACGATCACGGCTTCGTGGTCTGCGCT
____________________________________________________________
consensus GCCGTGATGGGTCAGAACCTGATTCTGAACATGAACGATCACGGCTTCGTGGTCTGCGCT
. : . : . : . : . : . :
gi|20216847|gb|AJ449+ TTTAACAGGACGGTTTCCAAAGTGGATGACTTTCTGGCCAATGAGGCCAAAGGAACCAAA
gi|20216891|gb|AJ449+ TTTAACAGGACGGTTTCCAAAGTGGATGACTTTCTGGCCAATGAGGCCAAAGGAACCAAA
gi|7127370|gb|AJ3959+ TTTAACAGGACGGTTTCCAAAGTGGATGACTTTCTGGCCAATGAGGCCAAAGGAACCAAA
gi|46300945|gb|CN221+ TTTAACAGGACGGTTTCCAAAGTGGATGACTTTCTGGCCAATGAGGCCAAAGGAACCAAA
gi|32279955|gb|CD729+ TTTAACAGGACGGTTTCCAAAGTGGATGACTTTCTGGCCAATGAGGCCAAAGGAACCAAA
gi|14004221|gb|BG710+ TTTAACAGGACGGTTTCCAAAGTGGATGACTTTCTGGCCAATGAGGCCAAAGGAACCAAA
gi|25905144|gb|BU412+ TTTAACAGGACGGTTTCCAAAGTGGATGACTTTCTGGCCAATGAGGCCAAAGGAACCAAA
____________________________________________________________
consensus TTTAACAGGACGGTTTCCAAAGTGGATGACTTTCTGGCCAATGAGGCCAAAGGAACCAAA
. : . : . : . : . : . :
gi|20216847|gb|AJ449+ GTGATTGGTGCTCACAGCCTGGAGGAGATGGTCTCGAAGCTGAAGAAGCCTCGACGCATC
gi|20216891|gb|AJ449+ GTGATTGGTGCTCACAGCCTGGAGGAGATGGTCTCGAAGCTGAAGAAGCCTCGACGCATC
gi|7127370|gb|AJ3959+ GTGATTGGTGCTCACAGCCTGGAGGAGATGGTCTCGAAGCTGAAGAAGCCTCGACGCATC
gi|46300945|gb|CN221+ GTGATCGGTGCTCACAGCCTGGAGGAGATGGTCTCGAAGCTGAAGAAGCCTCGACGCATC
gi|32279955|gb|CD729+ GTGATCGGTGCTCACAGCCTGGAGG
gi|14004221|gb|BG710+ GTGATCGGTGCTCACAGCCTGGAGGAGATGGTCTCGAAGCTGAAGAAGCCTCGACGCATC
gi|25905144|gb|BU412+ GTGATCGGTGCTCACAGCCTGGAGGAGATGGTCTCGAAGCTGAAGAAGCCTCGACGCATC
____________________________________________________________
consensus GTGATCGGTGCTCACAGCCTGGAGGAGATGGTCTCGAAGCTGAAGAAGCCTCGACGCATC
. : . : . : . : . : . :
gi|20216847|gb|AJ449+ ATCTTGCTGGTGAAGGCTGGAAGTGCAGTGGATGATTTCATCAATAAATTAGTGCCGTTG
gi|20216891|gb|AJ449+ ATCTTGCTGGTGAAGGCTGGAAGTGCAGTGGATGATTTCATCAATAAATTAGTGCCGTTG
gi|7127370|gb|AJ3959+ ATCTTGCTGGTGAAGGCTGGAAGTGCAGTGGATGATTTCATCAATAAATTAGTGCCGTTG
gi|46300945|gb|CN221+ ATCTTGCTGGTGAAGGCTGGAAGTGCAGTGGATGATTTCATCAATAAATTAGTGCCATTG
gi|14004221|gb|BG710+ ATCTTGCTGGTGAAGGCTGGAAGTGCAGTGGATGATTTCATCAATAAATTAGTGCCGTTG
gi|25905144|gb|BU412+ ATCTTGCTGGTGAAGGCTGGAAGTGCAGTGGATGATTTCATCAATAAATTAGTGCCGTTG
____________________________________________________________
consensus ATCTTGCTGGTGAAGGCTGGAAGTGCAGTGGATGATTTCATCAATAAATTAGTGCCGTTG
. : . : . : . : . : . :
gi|20216847|gb|AJ449+ TTGGAGACTGGAGACATCATAATTGATGGTGGGAATTCTGAGTATAGAGATACCACGAGA
gi|20216891|gb|AJ449+ TTGGAGACTGGAGACATCATAATTGATGGTGGGAATTCTGAGT
gi|7127370|gb|AJ3959+ TTGGAGACTGGAGACATCATAATTGATGGNGGGAATTCTGAGTATAGAGATACCACGAGA
gi|46300945|gb|CN221+ TTGGAGACTGGAGACATCATAATTGATGGTGGGAATTCTGAGTATAGAGATACCACGAGA
gi|14004221|gb|BG710+ TTGGAGACTGGAGACATCATAATTGATGGTGGGAATTCTGAGTATAGAGATACCACGAGA
gi|25905144|gb|BU412+ TTGGAGACTGGAGACATCATAATTGATGGTGGGAATTCTGAGTATAGAGATACCACGAGA
____________________________________________________________
consensus TTGGAGACTGGAGACATCATAATTGATGGTGGGAATTCTGAGTATAGAGATACCACGAGA
. : . : . : . : . : . :
gi|20216847|gb|AJ449+ CGCTGTAAGGAGCTGCTGCAAAAAGGCCTCTTATTTGTTGGA-AGTGGTGTTAGTGGTGG
gi|7127370|gb|AJ3959+ CGCTGTAAGGAGCTGCTGCAAAAAGGCCTCTTATTTGTTGGA-AGTGGTGTTAGTGGTGG
gi|46300945|gb|CN221+ CGCTGTAAGGAGCTGCTGCAAAAAGGCCTCTTATTTGTTGGA-AGTGGTGTTAGTGGTGG
gi|14004221|gb|BG710+ CGCTGTAAGGAGCTGCTGCAAAAAGGCCTCTTATTTGTTGGA-AGTGGTGTTAGTGGTGG
gi|25905144|gb|BU412+ CGCTGTAAGGAGCTGCTGCAAAAAGGCCTCTTAGTTGTCGGACAGTGGTGTAAGTGGTGG
____________________________________________________________
consensus CGCTGTAAGGAGCTGCTGCAAAAAGGCCTCTTATTTGTTGGA-AGTGGTGTTAGTGGTGG
. : . : . : . : . : . :
gi|20216847|gb|AJ449+ AGAGGAGGG-GGCCAGA-TATGGTCCTTCACTCATGCCAGGAGGATCCAAAGAAGCCTGG
gi|7127370|gb|AJ3959+ AGAGGA
gi|46300945|gb|CN221+ AGAGGAAGG-GGCCAGAATATGGTCCTTCACTCATGCCAGGAGGATCCAAAGAAGCCTGG
gi|14004221|gb|BG710+ AGANNNNNNNGGCCAGA-TATGGTCCTTCACTCATGCCAGGAGGATCCAAAGAAGCCTGG
gi|25905144|gb|BU412+ AGAGGAGGG-GGCCAGA-TATGGTCCTTCACTCATGCCAGGAGGATCCAAAGAAGCCTGT
____________________________________________________________
consensus AGAGGAGGG-GGCCAGA-TATGGTCCTTCACTCATGCCAGGAGGATCCAAAGAAGCCTGG
. : . : . : . : . : . :
gi|20216847|gb|AJ449+ CCACATATCAAGACCATATTTTAAAGCCTTGCTGCTAAAGTGGGGATCTTGGGGAACCTT
gi|46300945|gb|CN221+ CCACATATCAAGACCATATTTCAAAGCATTGCTGCTAAAGTGGG-ATCT-GGGGAACCTT
gi|14004221|gb|BG710+ CCACATATCAAGACCATATTTCAAAGCATTGCTGCTAAAGTGGG-ATCT-GGGGAACCTT
gi|25905144|gb|BU412+ GCACATATCAAGACCATATTTCAAAGCATTGCTGCTAAAGTGGG-ATCT-GGGGAACCTT
____________________________________________________________
consensus CCACATATCAAGACCATATTTCAAAGCATTGCTGCTAAAGTGGG-ATCT-GGGGAACCTT
. : . : . : . : . : . :
gi|20216847|gb|AJ449+ GTT
gi|46300945|gb|CN221+ GTTGTGA-CTGGGTAGGAAAGGGAGGGGGCTGGACACTTTGTGA-AGA
gi|14004221|gb|BG710+ GTTGTGA-CTG
gi|25905144|gb|BU412+ GTCGTGAACTGGGTAGGAGAGGAGGGTGCCGGGACACTTTGTGACAGATGGTGCACAATG
____________________________________________________________
consensus GTTGTGA-CTGGGTAGGAAAGGAAGGGGCCGGGACACTTTGTGACAGATGGTGCACAATG
. : . : . : . : . : . :
gi|25905144|gb|BU412+ CGGATCGACTCTGGACACATTCAGTTGATCTGCGAGGCCTACCCCCTGATGACA
____________________________________________________________
consensus CGGATCGACTCTGGACACATTCAGTTGATCTGCGAGGCCTACCCCCTGATGACA
******************* Contig 2 ********************
. : . : . : . : . : . :
gi|15083164|gb|BI389+ GAGCCGTCCGTGAGGGGCCCGCAGCGCCGCCGCCATGGCCGAAG-CTGATATTGCGTTGA
gi|14471962|gb|BI064+ GTCCGTGAGGG-CCCGCAGCGCCGCCGCCATGGCCGAAG-CTGATATTGCGTTGA
gi|5882902|gb|AI9798+ TGAGGG-CCCGCAGCGCCGCCGCCATGGCCGAAG-CTGATATTGCGTTGA
gi|25906981|gb|BU414+ GGGCCCGCAGCGCCGCCGCCATGGCCGAAG-CTGATATTGCGTTGA
gi|14472975|gb|BI065+ GCGTTGA
gi|32373861|gb|CD761+ GCCGAAG-CTGATATTGCGTTGA
gi|25337670|gb|BU126+ CGCCATGGCCGAAGACTGATATTGCGTTGA
____________________________________________________________
consensus GAGCCGTCCGTGAGGGGCCCGCAGCGCCGCCGCCATGGCCGAAG-CTGATATTGCGTTGA
. : . : . : . : . : . :
gi|15083164|gb|BI389+ TCGGACTGGCCGTGATGGGTCAGAACCTGATTCTGAACATGAACGATCACGGCTTCGTGG
gi|14471962|gb|BI064+ TCGGACTGGCCGTGATGGGTCAGAACCTGATTCTGAACATGAACGATCACGGCTTCGTGG
gi|5882902|gb|AI9798+ TCGGACTGGCCGTGATGGGTCAGAACCTGATTCTGAACATGAACGATCACGGCTTCGTGG
gi|25906981|gb|BU414+ TCGGACTGGCCGTGATGGGTCAGAACCTGATTCTGAACATGAACGATCACGGCTTCGTGG
gi|14472975|gb|BI065+ TCGGACTGGCCGTGATGGGTCNNAACCTGATTCTGAACATGAACGATCACGGCTTCGTGG
gi|32373861|gb|CD761+ TCGGACTGGCCGTGATGGGTCAGAACCTGATTCTGAACATGAACGATCACGGCTTCGTGG
gi|25337670|gb|BU126+ TCGGACTGGCCGTGATGGGACAGAAC-TGATTCTGAACATGAACGATCACGGCTTCGTGG
____________________________________________________________
consensus TCGGACTGGCCGTGATGGGTCAGAACCTGATTCTGAACATGAACGATCACGGCTTCGTGG
. : . : . : . : . : . :
gi|15083164|gb|BI389+ -TCTGCGCTTTTAACAG-GACGGTTTCCAAAGTGGATGACTTTCTGGCCAATGAGGCCAA
gi|14471962|gb|BI064+ -TCTGCGCTTTTAACAG-GACGGTTTCCAAAGTGGATGACTTTCTGGCCAATGAGGCCAA
gi|5882902|gb|AI9798+ GTCTGCGCTTTTAACAG-GACGGTTTCCAAAGTGGATGACTTTCTGGCCAATGAGGCCAA
gi|25906981|gb|BU414+ -TCTGCGCTTTTAACAG-GACGGTTTCCAAAGTGGATGACTTTCTGGCCAATGAGGCCAA
gi|14472975|gb|BI065+ -TCTGCGCTTTTAACAG-GACGGTTTCCAAAGTGGATGACTTTCTGGCCAATGAGGCCAA
gi|32277798|gb|CD726+ AGTGGATGACTTTCTGGCCAATGAGGCCAA
gi|13675523|gb|BG625+ GACTTTCTGGCNNNTGAGGCCAA
gi|32373861|gb|CD761+ -TCTGCGCTTTTAACAG-GACGGTTTCCAAAGTGGATGACTTTCTGGCCAATGAGGCCAA
gi|25337670|gb|BU126+ -TCTGCGCTTTTAACAGTGACGGTTTCCAAAGTGGATGACTTTCTGGCCAATGAGGCCAA
gi|25349987|gb|BU136+ TTTCTGGCCAATGAGGC-AA
____________________________________________________________
consensus -TCTGCGCTTTTAACAG-GACGGTTTCCAAAGTGGATGACTTTCTGGCCAATGAGGCCAA
. : . : . : . : . : . :
gi|15083164|gb|BI389+ AGGAACCAAAGTGATCGGTGCTCACAGCCTGGAGGAGAATGGTCTCGAAGC-TGAAGAAG
gi|14471962|gb|BI064+ AGGAACCAAAGTGATCGGTGCTCACAGCCTGGAGGAGA-TGGTCTCGAAGC-TGAAGAAG
gi|5882902|gb|AI9798+ AGGAACCAAAGTGATCGGTGCTCACAGCCTGGAGGAGA-TGGTCTCGAAGC-TGAAGAAG
gi|25906981|gb|BU414+ AGGAACCAAAGTGATCGGTGCTCACAGCCTGGAGGAGA-TGGTCTCGAAGC-TGAAGAAG
gi|14472975|gb|BI065+ AGGAACCAAAGTGATCGGTGCTCACAGCCTGGAGGAGA-TGGTCTCGAAGC-TGAAGAAG
gi|32277798|gb|CD726+ AGGAACCAAAGTGATCGGCGCTCACAGCCTGGAGGAGA-TGGTCTCGAAGCGTGAAGAAG
gi|13675523|gb|BG625+ AGGAACCAAAGTGATCGGTGCTCACAGCCTGGAGGAGA-TGGTCTCGAAGC-TGAAGAAG
gi|32373861|gb|CD761+ AGGAACCAAAGTGATCGGTGCTCACAGCCTGGAGGAGA-TGGTCTCGAAGC-TGAAGAAG
gi|25337670|gb|BU126+ AGGAACCAAAGTGATCGGTGCTCACAGCCTGGAGGAGA-TGGTCTCAAAGC-TGAA-AAG
gi|25349987|gb|BU136+ AGGAACCAAAGTGATCGGTGCTCACAGCCTGGAGGAGA-TGGTCTCGAAGC-TGAAGAAG
gi|13192342|gb|AL587+ AAGTGATCGGTGCTCACAGCCTGGAGGAGA-TGGTCTCGAAGC-TGAAGAAG
____________________________________________________________
consensus AGGAACCAAAGTGATCGGTGCTCACAGCCTGGAGGAGA-TGGTCTCGAAGC-TGAAGAAG
. : . : . : . : . : . :
gi|15083164|gb|BI389+ CCTCGACGCATCATCTTGCTGGTGAAGGCTGGAAGTGCAGTGGATGATTTCATCAATAAA
gi|14471962|gb|BI064+ CCTCGACGCATCATCTTGCTGGTGAAGGCTGGAAGTGCAGTGGATGATTTCATCAATAAA
gi|5882902|gb|AI9798+ CCTCGACGCATCATCTTGCTGGTGAAGGCTGGAAGTGCAGTGGATGATTTCATCAATAAA
gi|25906981|gb|BU414+ CCTCGACGCATCATCTTGCTGGTGAAGGCTGGAAGTGCAGTGGATGATTTCATCAATAAA
gi|14472975|gb|BI065+ CCTCGACGCATCATCTTGCTGGTGAAGGCTGGAAGTGCAGTGGATGATTTCATCAATAAA
gi|32277798|gb|CD726+ CCTCGACGCATCATCTTGCTGGTGAAGGCTGGAAGTGCAGTGGATGATTTCATCAATAAA
gi|13675523|gb|BG625+ CCTCGACGCATCATCTTGCTGGTGAAGGCTGGAAGTGCAGTGGATGATTTCATCAATAAA
gi|32373861|gb|CD761+ CCTCGACGCATCATCTTGCTGGTGAAGGCTGGAAGTGCAGTGGATGATTTCATCAATAAA
gi|25337670|gb|BU126+ CCTCGA-GCATCATCTTGCTGGTGAAGGCTGGAA-TGCAGTGGATGATTTCATCAATAAA
gi|25349987|gb|BU136+ CCTCGACGCATCATCTTGCTGGTGAAGGCTGGAAGTGCAGTGGATGATTTCATCAATAAA
gi|32288938|gb|CD738+ TCGACGCATCATCTTGCTGGTGAAGGCTGGAAGTGCAGCGGATGATTTCATCAATAAA
gi|13192342|gb|AL587+ CCTCGACGCATCATCTTGCTGGTGAAGGCTGGAAGTGCAGTGGATGATTTCATCAATAAA
____________________________________________________________
consensus CCTCGACGCATCATCTTGCTGGTGAAGGCTGGAAGTGCAGTGGATGATTTCATCAATAAA
. : . : . : . : . : . :
gi|15083164|gb|BI389+ TTAGTGCCGTTGTTGGAGACTGGAGACATCATAATTGATGGTGGGAATTCTGAGTATAGA
gi|14471962|gb|BI064+ TTAGTGCCGTTGTTGGAGACTGGAGACATCATAATTGATGGTGGGAATTCTGAGTATAGA
gi|5882902|gb|AI9798+ TTAGTGCCGTTGTTGGAGACTGGAGACATCATAATTGATGGTGGGAATTCTGAGTATAGA
gi|25906981|gb|BU414+ TTAGTGCCGTTGTTGGAGACTGGAGACATCATAATTGATGGTGGGAATTCTGAGTATAGA
gi|14472975|gb|BI065+ TTAGTGCCATTGTTGGAGACTGGAGACATCATAATTGATGGTGGGAATTCTGAGTATAGA
gi|32277798|gb|CD726+ TTAGTGCCATTGTTGGAGACTGGAGACATCATAATTGATGGTGGGAATTCTGAGTATAGA
gi|13675523|gb|BG625+ TTAGTGCCGTTGTTGGAGACTGGAGACATCATAATTGATGGTGGGAATTCTGAGTATAGA
gi|32373861|gb|CD761+ TTAGTGCCGTTGTTGGAGACTGGAGACATCATAATTGATGGTGGGAATTCTGAGTATAGA
gi|25337670|gb|BU126+ TTAGTGCCGTTGTTGGAGACTGGAGACATCATAATTGATGGTGGGAATTCTGAGTATAGA
gi|25349987|gb|BU136+ TTAGTGCCGTTGTTGGAGACTGGAGACATCATAATTGATGGTGGGAATTCTGAGTATAGA
gi|41331211|gb|CK610+ GGAGACTGGAGACATCATAATTGATGGTGGGAATTCTGAGTATAGA
gi|32288938|gb|CD738+ TTAGTGCCATTGTTGGAGACTGGAGACATCATAATTGATGGTGGGAATTCTGAGTATAGA
gi|13192342|gb|AL587+ TTAGTGCCATTGTTGGAGACTGGAGACATCATAATTGATGGTGGGAATTCTGAGTATAGA
gi|27591949|gb|CB017+ CTGGAGACATCATAATTGATGGTGGGAATTCTGAGTATAGA
gi|33491161|gb|CF257+ ATTCTGAGTATAGA
____________________________________________________________
consensus TTAGTGCCGTTGTTGGAGACTGGAGACATCATAATTGATGGTGGGAATTCTGAGTATAGA
. : . : . : . : . : . :
gi|15083164|gb|BI389+ GATACCACGAGACGCTGTAAGGAGCTGCTGCAAAAA-GGCCTCTTATTTGTTGGAAGTGG
gi|14471962|gb|BI064+ GATACCACGAGACGCTGTAAGGAGCTGCTGCAAAAA-GGCCTCTTATTTGTTGGAAGTGG
gi|5882902|gb|AI9798+ GATACCACGAGACGCTGTAAGGAGCTGCTGCAAAAA-GGCCTCTTATTTGTTGGAAGTGG
gi|25906981|gb|BU414+ GATACCACGAGACGCTGTAAGGAGCTGCTGCAAAAA-GGCCTCTTATTTGTTGGAAGTGG
gi|14472975|gb|BI065+ GATACCACGAGACGCTGTAAGGAGCTGCTGCAAAAA-GGCCTCTTATTTGTTGGAAGTGG
gi|32277798|gb|CD726+ GATACCACGAGACGCTGTAAGGAGCTGCTGCAAAAA-GGCCTCTTATTTGTTGGAAGTGG
gi|13675523|gb|BG625+ GATACCACGAGACGCTGTAAGGAGCTGCTGCAAAAA-GGCCTCTTATTTGTTGGAAGTGG
gi|32373861|gb|CD761+ GATACCACGAGACGCTGTAAGGAGCTGCTGCAAAAA-GGCCTCTTATTTGTTGGAAGTGG
gi|25337670|gb|BU126+ GATACCACGAGACGCTGTAAGGAGCTGCTGCAAAAAAGGCCTCTTATTTGTTGGAAGTGG
gi|25349987|gb|BU136+ GATACCACGAGACGCTGTAAGGAGCTGCTGCAAAAA-GGCCTCTTATTTGTTGGAAGTGG
gi|41331211|gb|CK610+ GATACCACGAGACGCTGTAAGGAGCTGCTGCAAAAA-GGCCTCTTATTTGTTGGAAGTGG
gi|32288938|gb|CD738+ GATACCACGAGACGCTGTAAGGAGCTGCTGCAAAAA-GGCCTCTTATTTGTTGGAAGTGG
gi|13192342|gb|AL587+ GATACCACGAGACGCTGTAAGGAGCTGCTGCAAAAA-GGCCTCTTATTTGTTGGAAGTGG
gi|27591949|gb|CB017+ GATACCACGAGACGCTGTAAGGAGCTGCTGCAAAAA-GGCCTCTTATTTGTTGGAAGTGG
gi|33491161|gb|CF257+ GATACCACGAGACGCTGTAAGGAGCTGCTGCAAAAA-GGCCTCTTATTTGTTGGAAGTGG
gi|32287204|gb|CD736+ AAAAA-GGCCTCTTATTTGTTGGAAGTGG
gi|25848797|gb|BU340+ AGACGCTGTAAGGAGCTGCTGCAAAAA-GGCCTCTTATTTGTTGGAAGTGG
____________________________________________________________
consensus GATACCACGAGACGCTGTAAGGAGCTGCTGCAAAAA-GGCCTCTTATTTGTTGGAAGTGG
. : . : . : . : . : . :
gi|15083164|gb|BI389+ TGTTAGTGGTGGAGAGGAGGGGGCCAGATATGGTCCTTCACTCATGCCAGGAGGATCCAA
gi|14471962|gb|BI064+ TGTTAGTGGTGGAGAGGAGGGGGCCAGATATGGTCCTTCACTCATGCCAGGAGGATCCAA
gi|5882902|gb|AI9798+ TGTTAGTGGTGGAAAGGAGGGGGC-AGATATGGTCCTTCACTCATGCCAGGAGGATCCAA
gi|25906981|gb|BU414+ TGTTAGTGGTGGAGAGGAGGGGGCCAGATATGGTCCTTCACTCATGCCAGGAGGATCCAA
gi|14472975|gb|BI065+ TGTTAGTGGTGGAGAGGAGGGGGCCAGATATGGTCCTTCACTCATGCCAGGAGGATCCAA
gi|32277798|gb|CD726+ TGTTAGTGGTGGAGAGGAGGGGGCCAGATATGGTCCTTCACTCATGCCAGGAGGATCCAA
gi|13675523|gb|BG625+ TGTTAGTGGTGGAGAGGAGGGGGCCAGATATGGTCCTTCACTCATGCCAGGAGGATCCAA
gi|32373861|gb|CD761+ TGTTAGTGGTGGAGAGGAGGGGGCCAGATATGGTCCTTCACTCATGCCAGGAGGATCCAA
gi|25337670|gb|BU126+ TGTTAGTGGTGGAGAGGAGGGGGCCAGATATGGTCCTTCACTCATGCCAGGAGGATCCAA
gi|25349987|gb|BU136+ TGTTAGTGGTGGAGAGGAGGGGGCCAGATATGGTCCTTCACTCATGCCAGGAGGATCCAA
gi|41331211|gb|CK610+ TGTTAGTGGTGGAGAGGAGGGGGCCAGATATGGTCCTTCACTCATGCCAGGAGGATCCAA
gi|32288938|gb|CD738+ GGTTAGTGGTGGAGAGGAGGGGGCCAGATATGGTCCTTCACTCATGCCAGGAGGATCCAA
gi|13192342|gb|AL587+ TGTTAGTGGTGGAGAGGAGGGGGCCAGATATGGTCCTTCACTCATGCCAGGAGGATCCAA
gi|27591949|gb|CB017+ TGTTAGTGGTGGAGAGGAGGGGGCCAGATATGGTCCTTCACTCATGCCAGGNNGATCCAA
gi|33491161|gb|CF257+ TGTTAGTGGTGGAGAGGAGGGGGCCAGATATGGTCCTTCACTCATGCCAGGAGGATCCAA
gi|32287204|gb|CD736+ TGTTAGTGGTGGAGAGGAGGGGGCCAGATATGGTCCTTCACTCATGCCAGGAGGATCCAA
gi|25848797|gb|BU340+ TGTTAGTGGTGGAGAGGAGGGGGCCAGATATGGTCCTTCACTCATGCCAGGAGGATCCAA
gi|25895934|gb|BU387+ GGTCCTTCACTCATGCCAGGAGGATCCAA
gi|25328512|gb|BU119+ AA
____________________________________________________________
consensus TGTTAGTGGTGGAGAGGAGGGGGCCAGATATGGTCCTTCACTCATGCCAGGAGGATCCAA
. : . : . : . : . : . :
gi|15083164|gb|BI389+ AGAAGCCTGGCCACATATCAAGACCATATTTCAAAGCATTGCTGCTNNAGTGGGATCTGG
gi|14471962|gb|BI064+ AGAAGCCTGGCCACATATCAAGACCATATTTCAAAGCATTGCTGCTAAAGTGGGATCTGG
gi|5882902|gb|AI9798+ AGAAGCCTGGCCACATATCAAG
gi|25906981|gb|BU414+ AGAAGCCTGGCCACATATCAAGACCATATTTCAAAGCATTGCTGCTAAAGTGGGATCTGG
gi|14472975|gb|BI065+ AGAAGCCTGGCCACATATCAAGACCATATTTCAAAGCATTGCTGCTAAAGTGGGATCTGG
gi|32277798|gb|CD726+ AGAAGCCTTGGCACATATCAAGACCATATTTCAAAGCATTGCTGCTAAAGTGGGATCTGG
gi|13675523|gb|BG625+ AGAAGCCTGGCCACATATCAAGACCATATTTCAAAGCATTGCTGCTAAAGTGGGATCTGG
gi|32373861|gb|CD761+ AGAAGCCTGGCCACATATCAAGACCATATTTCAAAGCATTGCTGCTAAAGTGGGATCTGG
gi|25337670|gb|BU126+ AGAAGCCTGGCCACATATCAAGACCATATTTCAAAGCATTGCTGCTAAAGTGGGATCTGG
gi|25349987|gb|BU136+ AGAAGCCTGGCCACATATCAAGACCATATTTCAAAGCATTGCTGCTAAAGTGGGATCTGG
gi|41331211|gb|CK610+ AGAAGCCTGGCCACATATCAAGACCATATTTCAAAGCATTGCTGCTAAAGTGGGATCTGG
gi|32288938|gb|CD738+ AGAAGCCTGGCCACATATCAAGACCATATTTCAAAGCATTGCTGCTAAAGTGGGATCTGG
gi|13192342|gb|AL587+ AGAAGCCTGGCCACATATCAAGACCATATTTCAAAGCATTGCTGCTAAAGTGGGATCTGG
gi|27591949|gb|CB017+ AGAAGCCTGGCCACATATCAAGACCATATTTCAAAGCATTGCTGCTAAAGTGGGATCTGG
gi|33491161|gb|CF257+ AGAAGCCTGGCCACATATCAAGACCATATTTCAAAGCATTGCTGCTAAAGTGGGATCTGG
gi|32287204|gb|CD736+ AGAAGCCTGGCCACATATGAAGACCATATTTCAAAGCATTGCTGCTAAAGTGGGATCTGG
gi|25848797|gb|BU340+ AGAAGCCTGGCCACATATCAAGACCATATTTCAAAGCATTGCTGCTAAAGTGGGATCTGG
gi|25529269|gb|BU261+ CCATATTTCAAAGCATTGCTGCTAAAGTGGGATCTGG
gi|25895934|gb|BU387+ AGAAGCCTGGCCACATATCAAGACCATATTTCAAAGCATTGCTGCTAAAGTGGGATCTGG
gi|25328512|gb|BU119+ AGAAGCCTGG-CACATATCAAGACCATATTTCAAAGCATTGCTGCTAAAGTGGGATCTGG
____________________________________________________________
consensus AGAAGCCTGGCCACATATCAAGACCATATTTCAAAGCATTGCTGCTAAAGTGGGATCTGG
. : . : . : . : . : . :
gi|15083164|gb|BI389+ GNNNNCCTTGTTGTGACTGGGTAGGAGNNNNANNNGTGCCGGACACTTT-GTGAA-GNTG
gi|14471962|gb|BI064+ GGAA-CCTTGTTGTGACTGGGTNNNAGAGGAGG--GTGCCGGACACNNN-GTGAA-GATG
gi|25906981|gb|BU414+ GGAA-CCTTGT-GTGACTGGGTAGGAGAGGAGG--GTGCCGGACACTTTCGTGAACGATG
gi|14472975|gb|BI065+ GGAA-CCTTGTTGTGACTGGGTANNNNNNNNNNG-GTGCTGGACACTTT-GTGAA-GATG
gi|32277798|gb|CD726+ GG
gi|13675523|gb|BG625+ GGAA-CCTTGTTGTGACTGGGTAGGAGANNGAGG-GTGCCGGACACTTT-GTGAA-GATG
gi|32373861|gb|CD761+ GGAA-CCTTGTTGTGACTGGGTAGGAGAGGAGG--GTGCCGGACACTTT-GTGAA-GATG
gi|25337670|gb|BU126+ GGAA-CCTTGTTGTGACTGGGTAGGAGAGGAGG--GTGCCGGACACTTT-GTGAA-GATG
gi|25349987|gb|BU136+ GGAA-CCTTGTTGTGACTGGGTAGGAGAGGAGG--GTGCCGGACACTTT-GTGAA-GATG
gi|41331211|gb|CK610+ GGAA-CCTTGTTGTGACTGGGTAGGAGAGGAGG--GTGCCGGACACTTT-GTGAA-GATG
gi|32288938|gb|CD738+ GGAA-CCTTGTTGTGACTGGGTAGGAGAGGAGG--GTGCCGGACACTTT-GTGAA-GATG
gi|13192342|gb|AL587+ GGAA-CCTTGTTGTGACTGGGTAGGAGAGGAGG--GTGCCGGACACTTT-GTGAA-GATG
gi|27591949|gb|CB017+ GGAA-CCTTGTTGTGACTGGGTAGGAGAGGAGG--GTGCCGGACACTTT-GTGAA-GATG
gi|33491161|gb|CF257+ GGAA-CCTTGTTGTGACTGGGTAGGAGAGGAGG--GTGCCGGACACTTT-GTGAA-GATG
gi|32287204|gb|CD736+ GGAA-CCTTGTTGTGACTGGGTAGGAGAGGAGG--GTGCCGGACACTTT-GGGAA-GATG
gi|25848797|gb|BU340+ GGAA-CCTTGTTGTGACTGGGTAGGAGAGGAGG--GTGCCGGACACTTT-GTGAA-GATG
gi|25848172|gb|BU340+ GGTAGGAGAGGAGG--GTGCCGGACACTTT-GTGAA-GATG
gi|25529269|gb|BU261+ GGAA-CCTTGTTGTGACTGGGTAGGAGAGGAGG--GTGCCGGACACTTT-GTGAA-GATG
gi|25895934|gb|BU387+ GGAA-CCTTGTTGTGACTGGGTAGGAGAGGAGG--GTGCCGGACACTTT-GTGAA-GATG
gi|32286662|gb|CD735+ GAGGAGG--GTGCCGGACAGTTT-GTGAA-GATG
gi|25328512|gb|BU119+ GGAA-CCT-GTTGTGACTGGGTAGGAGAGGAGG--GTGCCGGACACTTT-GTGAA-GATG
____________________________________________________________
consensus GGAA-CCTTGTTGTGACTGGGTAGGAGAGGAGG--GTGCCGGACACTTT-GTGAA-GATG
. : . : . : . : . : . :
gi|15083164|gb|BI389+ GTGCACAATGGGATTGAATATGGAGNCATGCAGTTGATCTGTG-AGGCCTACCACCTGAT
gi|14471962|gb|BI064+ GTGCACAATGGGATTGAATATGGAGACATGCAGTTGATC
gi|25906981|gb|BU414+ GTGCACAATGGGATTGACTATGGAGACATGCAGTTGATCTGTGCAGGCCTACCACCTGAT
gi|14472975|gb|BI065+ GTGCACAATGGAATTGAATATGGAGACATGCAGTTGATCTGTG-AGGCCTACCACCTGAT
gi|13675523|gb|BG625+ GTGCACAATGGGATTGAATATGGAGACATGCAGTTGATCTGTG-AGGCCTACCACCTGAT
gi|32373861|gb|CD761+ GTGCACAATGGGATTGAATATGGAGACATGCCGCTGATCTGTG-AGGCCTACCACC
gi|25337670|gb|BU126+ GTGCACAATGGGATTGAATATGGAGACATGCAGTTGATCTGTG-AGGCCTACCACCTGAT
gi|25349987|gb|BU136+ GTGCACAATGGGATTGAATATGGAGACATGCAGTTGATCTGTG-AGGCCTACCACCTGAT
gi|41331211|gb|CK610+ GTGCACAATGGGATTGAATATGGAGACATGCAGTTGATCTGTG-AGGCCTACCACCTGAT
gi|32288938|gb|CD738+ GTGCACAATGGGATTGAATATGGAGACATGCAGTTGATCTGTG-AGGCCTACCACCTGAT
gi|13192342|gb|AL587+ GTGCACAATGGGATTGAATATGGAGACATGCAGTTGATCTGTG-AGGCCTACCACCTGAT
gi|27591949|gb|CB017+ GTGCACAATGGGATTGAATATGGAGACATGCAGTTGATCTGTG-AGGCCTACCACCTGAT
gi|33491161|gb|CF257+ GTGCACAATGGGATTGAATATGGAGACATGCAGTTGATCTGTG-AGGCCTACCACCTGAT
gi|32287204|gb|CD736+ GTGCACAATGGGATTGAATATGG
gi|25848797|gb|BU340+ GTGCACAATGGGATTGAATATGGAGACATGCAGTTGATCTGTG-AGGCCTACCACCTGAT
gi|25848172|gb|BU340+ GTGCACAATGGGATTGAATATGGAGACATGCAGTTGATCTGTG-AGGCCTACCACCTGAT
gi|25529269|gb|BU261+ GTGCACAATGGGATTGAATATGGAGACATGCAGTTGATCTGTG-AGGCCTACCACCTGAT
gi|25895934|gb|BU387+ GTGCACAATGGGATTGAATATGGAGACATGCAGTTGATCTGTG-AGGCCTACCACCTGAT
gi|32286662|gb|CD735+ GTGCACAATGGGATTGAATATGGAGACATGCAGTTGATCTGTG-AGGCCTACCACCTGAT
gi|25328512|gb|BU119+ GTGCACAATGGGATTGAATATGGAGACATGCAGTTGATCTGTG-AGGCCTACCACCTGAT
gi|28594847|gb|BX272+ GTGCACAATGGGATTGAATATGGAGACATGCAGTTGATCTGTG-AGGCCTACCACCTGAT
gi|25862694|gb|BU354+ GATCTGTG-AGGCCTACCACCTGAT
gi|28585438|gb|BX262+ GCCTACCACCTGAT
____________________________________________________________
consensus GTGCACAATGGGATTGAATATGGAGACATGCAGTTGATCTGTG-AGGCCTACCACCTGAT
. : . : . : . : . : . :
gi|15083164|gb|BI389+ GAANGNNNTTGTGGGCATGGACCACGATG
gi|25906981|gb|BU414+ GAAAGATGTTGTGGGCATGGACCACGATGAGATGTCACAGGTATTCGAAGAAATGGAATA
gi|14472975|gb|BI065+ GA
gi|13675523|gb|BG625+ GAAAGATGTTGTGGGCATGGACCACGATGAGATGTCACAGGTATTTGAAGAA-TGGAATA
gi|25337670|gb|BU126+ GAAAGATGTTGTGGGCATGGACCACGATGAGATGTCACAGGTATCTGAAGAA-TGGAATA
gi|25349987|gb|BU136+ GAAAGATGTTGTGGGCATGGACCACGATGAGATGTCACAGGTATTTGAAGAA-TGGAATA
gi|41331211|gb|CK610+ GAAAGATGTTGTGGGCATGGACCA
gi|32288938|gb|CD738+ GAAAGATGTTGTGGGCATGGACCACGATGAGATGTCACAGGTATTTGAAGAA-TGGA-TA
gi|13192342|gb|AL587+ GAAAGATGTTGTGGGCATGGACCACGATGAGATGTCACAGGTATTTGAAGAA-TGGAATA
gi|27591949|gb|CB017+ GAAAGATGTTGTGGGCATGGACCACGATGAGATGTCACAGGTATTTGAAGAA-TGGAATA
gi|33491161|gb|CF257+ GAAAGATGTTGTGGGCATGGACCACGATGAGATGTCACAGGTATTTGAAGAA-TGGAATA
gi|25848797|gb|BU340+ GAAAGATGTTGTGGGCATGGACCACGATGAGATGTCACAGGTATTTGAAGAA-TGGAATA
gi|25848172|gb|BU340+ GAAAGATGTTGTGGGCATGGACCACGATGAGATGTCACAGGTATTTGAAGAA-TGGAATA
gi|25529269|gb|BU261+ GAAAGATGTTGTGGGCATGGACCACGATGAGATGTCACAGGTATTTGAAGAA-TGGAATA
gi|25895934|gb|BU387+ GAAAGATGTTGTGGGCATGGACCACGATGAGATGTCACAGGTATTTGAAGAA-TGGAATA
gi|32286662|gb|CD735+ GAAAGATGTTGTGGGCATGGACCACGATGAGATGTCACAGGTATTTGAAGAA-TGGAATA
gi|25328512|gb|BU119+ GAAAGATGTTGTGGGCATGGACCACGATGAGATGTCACAGGTATTTGAAGAA-TGGAATA
gi|28594847|gb|BX272+ GAAAGATGTTGTGGGCATGGACCACGATGAGATGTCACAGGTATTTGAAGAA-TGGAATA
gi|25862694|gb|BU354+ GAAAGATGTTGTGGGCATGGACCACGATGAGATGTCACAGGTATTTGAAGAA-TG-AATA
gi|28585438|gb|BX262+ GAAAGATGTTGTGGGCATGGACCACGATGAGATGTCACAGGTATTTGAAGAA-TGGAATA
____________________________________________________________
consensus GAAAGATGTTGTGGGCATGGACCACGATGAGATGTCACAGGTATTTGAAGAA-TGGAATA
. : . : . : . : . : . :
gi|25906981|gb|BU414+ ACACTGAACTTGGACTCTTTCCTGATTGAAATCACAGCCACTATTCTCAAATTCCCAGAT
gi|13675523|gb|BG625+ ACACTGAACT-GGACTCTTTCCTGA
gi|25337670|gb|BU126+ ACACTGAAACTGGACTCTTTCCTGATTGAAATCACAGCAA-TATTCTCAAATTCAAA
gi|25349987|gb|BU136+ ACACTGAACT-GGACTCTTTCCTGATTGAAATCACAGCCAATATTCTCAAATTCAAAGAT
gi|32288938|gb|CD738+ ACACTGAACT-GGAC
gi|13192342|gb|AL587+ ACACTTGAACTGGACTCTTTCCTGATTGAAATCACA-CCAATATTCTCAAATTCAAAGAT
gi|27591949|gb|CB017+ ACACTGAACT-GGACTCTTTCCTGATTGAAATCACAGCCAATATTCTCAAATTNNNAGAT
gi|33491161|gb|CF257+ ACACTGAACT-GGACTCTTTCCTGATTGAAATCACAGCCAATATTCTCAAATTCAAAGAT
gi|25848797|gb|BU340+ ACACTGAACT-GGACTCTTTCCTGATTGAAATCACAGCCAATATTCTCAAATTCAAAGAT
gi|25848172|gb|BU340+ ACACTGAACT-GGACTCTTTCCTGATTGAAATCACAGCCAATATTCTCAAATTCAAAGAT
gi|25529269|gb|BU261+ ACACTGAACT-GGACTCTTTCCTGATTGAAATCACAGCCAATATTCTCAAATTCAAAGAT
gi|25895934|gb|BU387+ ACACTGAACT-GGACTCTTTCCTGATTGAAATCACAGCCAATATTCTCAAATTCAAAGAT
gi|32286662|gb|CD735+ ACACTGAACT-GGACTCTTTCCTGATTGAAATCACAGCCAATATTCTCAAATTCAAAGAT
gi|25328512|gb|BU119+ ACACTGAACT-GGACTCTTTCCTGATTGAAATCACAGCCAATATTCTCAAATTCAAAGAT
gi|28594847|gb|BX272+ ACACTGAACT-GGACTCTTTCCTGATTGAAATCACAGCCAATATTCTCAAATTCAAAGAT
gi|25862694|gb|BU354+ ACACTGAACT-GGACTCTTTCCTGATTGAAATCACAGCCAATATTCTCAAATTCAAAGAT
gi|28585438|gb|BX262+ ACACTGAACT-GGACTCTTTCCTGATTGAAATCACAGCCAATATTCTCAAATTCAAAGAT
gi|28589005|gb|BX266+ CACAGCCAATATTCTCAAATTCAAAGAT
gi|25853302|gb|BU345+ CAAATTCAAAGAT
____________________________________________________________
consensus ACACTGAACT-GGACTCTTTCCTGATTGAAATCACAGCCAATATTCTCAAATTCAAAGAT
. : . : . : . : . : . :
gi|25906981|gb|BU414+ AAGGATGGCAAATACCTCCTCC
gi|25349987|gb|BU136+ AAGGATGGCAAATACCTCCTCCCAAAGATCAGGGACAGTGCAGGACAAAAAGGCACGGGG
gi|13192342|gb|AL587+ AAGGA
gi|27591949|gb|CB017+ AAGGATGGCAAATACCTCCTCCNAAAGATCAGGGACAGTGCAGGACAAAAAGGCACGGGG
gi|33491161|gb|CF257+ AAGGATGGCAAATACCTCCTCCCAAAGATCAGGGACAGTGCAGGACAAAAAGGCACGGGG
gi|25848797|gb|BU340+ AAGGATGGCAAATACCTCCTCCCAAAGATCAGGGACAGTGCAGGACAAAAAGGCACGGGG
gi|25848172|gb|BU340+ AAGGATGGCAAATACCTCCTCCCAAAGATCAGGGACAGTGCAGGACAAAAAGGCACGGGG
gi|25529269|gb|BU261+ AAGGATGGCAAATACCTCCTCCCAAAGATCAGGGACAGTGCAGGACAAAAAGGCACGGGG
gi|25895934|gb|BU387+ AAGGATGGCAAATACCTCCTCCCAAAGATCAGGGACAGTGCAGGACAAAAAGGCACGGGG
gi|32286662|gb|CD735+ AAGGATGGCAAATACCTCCTCCCAAAGATCAGGGACAGTGCAGGACAAAAAGGCACGGGG
gi|25328512|gb|BU119+ AAGGATGGCAAATACCTCCTCCCAAAGATCAGGGACAGTGCAGGACAAAAAGGCACGGGG
gi|28594847|gb|BX272+ AAGGATGGCAAATACCTCCTCCCAAAGATCAGGGACAGTGCAGGACAAAAAGGCACGGGG
gi|25862694|gb|BU354+ AAGGATGGCAAATACCTCCTCCCAAAGATCAGGGACAGTGCAGGACAAAAAGGCACGGGG
gi|28585438|gb|BX262+ AAGGATGGCAAATACCTCCTCCCAAAGATCAGGGACAGTGCAGGACAAAAAGGCACGGGG
gi|28589005|gb|BX266+ AAGGATGGCAAATACCTCCTCCCAAAGATCAGGGACAGTGCAGGACGAAAAGGCACGGGG
gi|25767238|gb|BU398+ CAAAGATCAGGGACAGTGCAGGACAAAAAGGCACGGGG
gi|25871604|gb|BU363+ CAAATACCTCCTCCCAAAGATCAGGTACAGTGCAGGACAAAAAGGCACGGGG
gi|25853302|gb|BU345+ AAGGATGGCAAATACCTCCTCCCAAAGATCAGGGACAGTGCAGGACAAAAAGGCACGGGG
gi|13163699|gb|AL584+ CAAAGATCAGGGACAGTGCAGGACAAAAAGGCACGGGG
____________________________________________________________
consensus AAGGATGGCAAATACCTCCTCCCAAAGATCAGGGACAGTGCAGGACAAAAAGGCACGGGG
. : . : . : . : . : . :
gi|25349987|gb|BU136+ AAGTGGACGGCAATTTCTGCCCTGGAATATGGAGTCCCTG
gi|27591949|gb|CB017+ AAGTGGACGGCAATTTCTGCCCTGGAATATGGAGTCCCTGTCACTCTCATNNNTGNNNCT
gi|33491161|gb|CF257+ AAGTGGACGGCAATTTCTGCCCTGGAATATGGAGTCCCGGTCACTCTCATAGGTGAGGCT
gi|25848797|gb|BU340+ AAGTGGACGGCAATTTCTGCCCTGGAATATGGAGTCCCGGTCACTCTCATAGGTGAGGCT
gi|25848172|gb|BU340+ AAGTGGACGGCAATTTCTGCCCTGGAATATGGAGTCCCGGTCACTCTCATAGGTGAGGCT
gi|25529269|gb|BU261+ AAGTGGACGGCAATTTCTGCCCTGGAATATGGAGTCCCGGTCACTCTCATAGGTGAGGCT
gi|25895934|gb|BU387+ AAGTGGACGGCAATTTCTGCCCTGGAATATGGAGTCCCTGTCACTCTCATAGGTGAGGCT
gi|32286662|gb|CD735+ AAGTGGACGGCAATTTCTGCCCTGGAATATGGAGTCCCTGTCACTCTCATAGGTGAGGCT
gi|25328512|gb|BU119+ AAGTGGACGGCAATTTCTGCCCTGGAATATGGAGTCCCGGTCACTCTCATAGGTGAGGCT
gi|28594847|gb|BX272+ AAGTGGACGGCAATTTCTGCCCTGGAATATGGAGTCCCTGTCACTCTCATAGGTGAGGCT
gi|25862694|gb|BU354+ AAGTGGACGGCAATTTCTGCCCTGGAATATGGAGTCCCTGTCACTCTCATAGGTGAGGCT
gi|28585438|gb|BX262+ AAGTGGACGGCAATTTCTGCCCTGGAATATGGAGTCCCGGTCACTCTCATAGGTGAGGCT
gi|28589005|gb|BX266+ AAGTGGACGGCAATTTCTGCCCTGGAATATGGAGTCCCTGTCACTCTCATAGGTGAGGCT
gi|41331966|gb|CK610+ GTCCCTGTCACTCTCATAGGTGAGGCT
gi|25829674|gb|BU321+ ATGGAGTCCCTGTCACTCTCATAGGTGAGGCT
gi|25767238|gb|BU398+ AAGTGGACGGCAATTTCTGCCCTGGAATATGGAGTCCCGGTCACTCTCATAGGTGAGGCT
gi|25871604|gb|BU363+ AAGTGGACGGCAATTTCTGCCCTGGAATATGGAGTCCCGGTCACTCTCATAGGTGAGGCT
gi|25853302|gb|BU345+ AAGTGGACGGCAATTTCTGCCCTGGAATATGGAGTCCCGGTCACTCTCATAGGTGAGGCT
gi|13163699|gb|AL584+ AAGTGGACGGCAATTTCTGCCCTGGAATATGGAGTCCCGGTCACTCTCATAGGTGAGGCT
gi|25516018|gb|BU256+ GTGGACGGCAATTTCTGCCCTGGAATATGGAGTCCCGGTCACTCTCATAGGTGAGGCT
gi|25863519|gb|BU355+ GTCCCGGTCACTCTCATAGGTGAGGCT
gi|28585716|gb|BX263+ AGGTGAGGCT
____________________________________________________________
consensus AAGTGGACGGCAATTTCTGCCCTGGAATATGGAGTCCCGGTCACTCTCATAGGTGAGGCT
. : . : . : . : . : . :
gi|27591949|gb|CB017+ GTGTTTGCACGGTGCCTGTCGTCCCT
gi|33491161|gb|CF257+ GTGTTTGCACGGTGCCTGTCGTCCCTCAAGGATGAGAGAGTGCAGGCCAGTAAGCTGCTG
gi|25848797|gb|BU340+ GTGTTTGCACGGTGCCTGTCGTCCCTCAAGGATGAGAGAGTGCAGGCCAGTAAGCTGCTG
gi|25848172|gb|BU340+ GTGTTTGCACGGTGCCTGTCGTCCCTCAAGGATGAGAGAGTGCAGGCCAGTAAGCTGCTG
gi|25529269|gb|BU261+ GTGTTTGCACGGTGCCTGTCGTCCCTCAAGGATGAGAGAGTGCAGGCCAGTAAGCTGCTG
gi|25895934|gb|BU387+ GTGTTTGCACGGTGCCTGTCGTCCCTCAAGGATGAGAGAGTGCAGGCCAGTAAGCTGCTG
gi|32286662|gb|CD735+ GTGTTTGCACGGTGCCTGTCGTCCCTCAAGGATGAGAGAGTGCAGGCCAGTAAGCTGCTG
gi|25328512|gb|BU119+ GTGTTTGCACGGTGCCTGTCGTCCCTCAAGGATGAGAGAGTGCAGGCCAGTAAGCTGCTG
gi|28594847|gb|BX272+ GTGTTTGCACGGTGCCTGTCGTCCCTCAAGGATGAGAGAGTGCAGGCCAGTAAGCTGCTG
gi|25862694|gb|BU354+ GTGTTTGCACGGTGCCTGTCGTCCCTCAAGGATGAGAGAGTGCAGGCCAGTAAGCTGCTG
gi|28585438|gb|BX262+ GTGTTTGCACGGTGCCTGTCGTCCCTCAAGGATGAGAGAGTGCAGGCCAGTAAGCTGCTG
gi|28589005|gb|BX266+ GTGTTTGCACGGTGCCTGTCGTCCCTCAAGGATGAGAGAGTGCAGGCCAGTAAGCTGCTG
gi|25494212|gb|BU246+ GCTG
gi|25753639|gb|BU303+ GCAGGCCAGTAAGCTGCTG
gi|25742223|gb|BU292+ GTCGTCCCTCAAGGATGAGAGAGTGCAGGCCAGTAAGCTGCTG
gi|25966977|gb|BU473+ CTGTCGTCCCTCAAGGATGAGAGAGTGCAGGCCAGTAAGCTGCTG
gi|25965517|gb|BU471+ TGCCTGTCGTCCCTCAAGGATGAGAGAGTGCAGGCCAGTAAGCTGCTG
gi|41331966|gb|CK610+ GTGTTTGCACGGTGCCTGTCGTCCCTCAAGGATGAGAGAGTGCAGGCCAGTAAGCTGCTG
gi|25829674|gb|BU321+ GTGTTTGCACGGTGCCTGTCGTCCCTCAAGGATGAGAGAGTGCAGGCCAGTAAGCTGCTG
gi|25767238|gb|BU398+ GTGTTTGCACGGTGCCTGTCGTCCCTCAAGGATGAGAGAGTGCAGGCCAGTAAGCTGCTG
gi|25871604|gb|BU363+ GTGTTTGCACGGTGCCTGTCGTCCCTCAAGGATGAGAGAGTGCAGGCCAGTAAGCTGCTG
gi|25853302|gb|BU345+ GTGTTTGCACGGTGCCTGTCGTCCCTCAAGGATGAGAGAGTGCAGGCCAGTAAGCTGCTG
gi|13163699|gb|AL584+ GTGTTTGCACGGTGCCTGTCGTCCCTCAAGGATGAGAGAGTGCAGGCCAGTAAGCTGCTG
gi|25516018|gb|BU256+ GTGTTTGCACGGTGCCTGTCGTCCCTCAAGGATGAGAGAGTGCAGGCCAGTAAGCTGCTG
gi|25863519|gb|BU355+ GTGTTTGCACGGTGCCTGTCGTCCCTCAAGGATGAGAGAGTGCAGGCCAGTAAGCTGCTG
gi|28585716|gb|BX263+ GTGTTTGCACGGTGCCTGTCGTCCCTCAAGGATGAGAGAGTGCAGGCCAGTAAGCTGCTG
____________________________________________________________
consensus GTGTTTGCACGGTGCCTGTCGTCCCTCAAGGATGAGAGAGTGCAGGCCAGTAAGCTGCTG
. : . : . : . : . : . :
gi|33491161|gb|CF257+ AATGGGCCTAAATTGACT-CAATTT-AGTGGGAACAAGAAGGCATTTCTTGAG-GACATA
gi|25848797|gb|BU340+ AATGGGCCTAAATTGACT-CAATTT-AGTGGGAACAAGAAGGCATTTCTTGAG-GACATA
gi|25848172|gb|BU340+ AATGGGCCTAAATTGACT-CAATTTTAGTGGGAACAAGAAGGCATTTCTTGAG-GACATA
gi|25529269|gb|BU261+ AATGGGCCTAAATTGACT-CAATTT-AGTGGGAACAAGAAGGCATTTCTTGAG-GACATA
gi|25895934|gb|BU387+ AATGGGCCTAAATTGACT-CAATTT-AGTGGGAACAAGAAGGCATTTCTTGAG-GACATA
gi|32286662|gb|CD735+ AATGGGCCTAAATTGACT-CAATTT-AGTGGGAACAAGAAGGCATTTCTTGAG-GACATA
gi|25328512|gb|BU119+ AATGGGCCTAAATTGACT-CAATTT-AGTGGGAACAAGAAGGCATTTCTTGAG-GACATA
gi|28594847|gb|BX272+ AATGGGCCTAAATTGACT-CAATTT-AGTGGGAACAAGAAGGCATTTCTTGAG-GACATA
gi|25862694|gb|BU354+ AATGGGCCTAAATTGACT-CAATTT-AGTGGGAACAAGAAGGCATTTCTTGAG-GATATA
gi|28585438|gb|BX262+ AATGGGCCTAAATTGACT-CAATTT-AGTGGGAACAAGAAGGCATTTCTTGAG-GACATA
gi|28589005|gb|BX266+ AATGGGCCTAAATTGACT-CAATTT-AGTGGGAACAAGAAGGCATTTCTTGAG-GACATA
gi|25945855|gb|BU456+ CCTAAATTGACT-CAATAT-AGTGGGAACAAGAAGGCATTTCTTGAG-GACATA
gi|25494212|gb|BU246+ AATGGGCCTAAATTGACT-CAATTT-AGTGGGAACAAGAAGGCATTTCTTGAG-GACATA
gi|25753639|gb|BU303+ AATGGGCCTAAATTGACT-CAATTT-AGTGGGAACAAGAAGGCATTTCTTGAG-GACATA
gi|25742223|gb|BU292+ AATGGGCCTAAATTGACT-CAATTT-AGTGGGAACAAGAAGGCATTTCTTGAG-GACATA
gi|25966977|gb|BU473+ AATGGGCCTAAATTGACT-CAATTT-AGTGGGAACAAGAAGGCATTTCTTGAG-GACATA
gi|25965517|gb|BU471+ AATGGGCCTAAATTGACT-CAATTT-AGTGGGAACAAGAAGGCATTTCTTGAG-GACATA
gi|41331966|gb|CK610+ AATGGGCCTAAATTGACT-CAATTT-AGTGGGAACAAGAAGGCATTTCTTGAG-GACATA
gi|25829674|gb|BU321+ AATGGGCCTAAATTGACT-CAATTT-AGTGGGAACAAGAAGGCATTTCTTGAG-GACATA
gi|25767238|gb|BU398+ AATGGGCCTAAATTGACT-CAATTT-AGTGGGAACAAGAAGGCATTTCTTGAG-GACATA
gi|25871604|gb|BU363+ AATGGGCCTAAATTGACT-CAATTT-AGTGGGAACAAGAAGGCATTTCTTGAG-GACATA
gi|25853302|gb|BU345+ AATGGGCCTAAATTGACT-CAATTT-AGTGGGAACAAGAAGGCATTTCTTGAG-GACATA
gi|13163699|gb|AL584+ AATGGGCCTAAATTGACT-CAATTT-AGTGGGAACAAGAAGGCATTTCTTGAG-GACATA
gi|25516018|gb|BU256+ AATGGGCCTAAATTGACT-CAATTT-AGTGGGAACAAGAAGGCATTTCTTGAG-GACATA
gi|25863519|gb|BU355+ AATGGGCCTAAATTGACT-CAATTT-AGTGGGAACAAGAAGGCATTTCTTGAG-GACATA
gi|28585716|gb|BX263+ AATGGGCCTAAATTGACT-CAATTT-AGTGGGAACAAGAAGGCATTTCTTGAGAGACATA
gi|25964859|gb|BU471+ GGGCCTAAATTGACTACAATTA-TGTGGGAACAAGAAGGCATTTCTTGAG-GACATA
____________________________________________________________
consensus AATGGGCCTAAATTGACT-CAATTT-AGTGGGAACAAGAAGGCATTTCTTGAG-GACATA
. : . : . : . : . : . :
gi|33491161|gb|CF257+ CGCAAGGCCCTGTATGCTTCCAAGATTATCTCCTATGCTCA-GGCTTCATGCTGCTGAGA
gi|25848797|gb|BU340+ CGCAAGGCCCTGTATGCTTCCAAGATTATCTCCTATGCTCAAGGCTTCATGCTGCTGAGA
gi|25848172|gb|BU340+ CGCAAGGCCCTGTATGCTTCCAAGATTATCTCCTATGCTCAAGGCTTCATGCTGCTGAGA
gi|25529269|gb|BU261+ CGCAAGGCCCTGTATGCTTCCAAGATTATCTCCTATGCTCAAGGCTTCATGCTGCTGAGA
gi|25895934|gb|BU387+ CGCAAGGCCCTGTATGCTTCCAAGATTATCTCCTATGCTCAAGGCTTCATGCTGCTGAGA
gi|32286662|gb|CD735+ CGCAAGGCCCTGTATGCTTCCAAGATTATCTCCTATGCTCAAGGCTTCATGCTGCTGAGA
gi|25328512|gb|BU119+ CGCAAGGCCCTGTATGCTTCCAAGATTATCTCCTATGCTCAAGGCTTCATGCTGCTGAGA
gi|28594847|gb|BX272+ CGCAAGGCCCTGTATGCTTCCAAGATTATTTCCTATGCTCAAGGCTTCATGCTGCTGAGA
gi|25862694|gb|BU354+ CGCAAGGCCCTGTATGCTTCCAAGATTATCTCCTATGCTCAAGGCTTCATGCTGCTGAGA
gi|28585438|gb|BX262+ CGCAAGGCCCTGTATGCTTCCAAGATTATCTCCTATGCTCAAGGCTTCATGCTGCTGAGA
gi|28589005|gb|BX266+ CGCAAGGCCCTGTATGCTTCCAAGATTATCTCCTATGCTCAAGGCTTCATGCTGCTGAGA
gi|25858518|gb|BU350+ CTCCTATGCTCAAGGCTTCATGCTGCTGAGA
gi|25945855|gb|BU456+ CGCAAGGCCCTGTATGCTTCCAAGATTATCTCCTATGCTCAAGGCTTCATGCTGCTGAGA
gi|25494212|gb|BU246+ CGCAAGGCCCTGTATGCTTCCAAGATTATCTCCTATGCTCAAGGCTTCATGCTGCTGAGA
gi|25753639|gb|BU303+ CGCAAGGCCCTGTATGCTTCCAAGATTATCTCCTATGCTCAAGGCTTCATGCTGCTGAGA
gi|25742223|gb|BU292+ CGCAAGGCCCTGTATGCTTCCAAGATTATCTCCTATGCTCAAGGCTTCATGCTGCTGAGA
gi|25966977|gb|BU473+ CGCAAGGCCCTGTATGCTTCCAAGATTATCTCCTATGCTCAAGGCTTCATGCTGCTGAGA
gi|25965517|gb|BU471+ CGCAAGGCCCTGTATGCTTCCAAGATTATCTCCTATGCTCAAGGCTTCATGCTGCTGAGA
gi|41331966|gb|CK610+ CGCAAGGCCCTGTATGCTTCCAAGATTATTTCCTATGCTCAAGGCTTCATGCTGCTGAGA
gi|25829674|gb|BU321+ CGCAAGGCCCTGTATGCTTCCAAGATTATCTCCTATGCTCAAGGCTTCATGCTGCTGAGA
gi|25767238|gb|BU398+ CGCAAGGCCCTGTATGCTTCCAAGATTATCTCCTATGCTCAAGGCTTCATGCTGCTGAGA
gi|25871604|gb|BU363+ CGCAAGGCCCTGTATGCTTCCAAGATTATCTCCTATGCTCAAGGCTTCATGCTGCTGAGA
gi|25853302|gb|BU345+ CGCAAGGCCCTGTATGCTTCCAAGATTATCTCCTATGCTCAAGGCTTCATGCTGCTGAGA
gi|13163699|gb|AL584+ CGCAAGGCCCTGTATGCTTCCAAGATTATCTCCTATGCTCAAGGCTTCATGCTGCTGAGA
gi|25516018|gb|BU256+ CGCAAGGCCCTGTATGCTTCCAAGATTATCTCCTATGCTCAAGGCTTCATGCTGCTGAGA
gi|25863519|gb|BU355+ CGCAAGGCCCTGTATGCTTCCAAGATTATCTCCTATGCTCAAGGCTTCATGCTGCTGAGA
gi|28585716|gb|BX263+ CGCAAGGCCCTGTATGCTTCCAAGATTATCTCCTTTGCTCAAGGCTTCATGCTGCTGAGA
gi|25964859|gb|BU471+ CGCAAGGCCCTGTATGCTTCCAAGATTATCTCCTATGCTCAAGGCTTCATGCTGCTGAGA
gi|28589004|gb|BX266- GCTTCATGCTGCTGAGA
gi|7130413|gb|AJ3974+ CTGAGA
gi|28585437|gb|BX262- GCTGCTGAGA
gi|28585715|gb|BX263- TTATCTCCTTTGCTCAAGGCTTCATGCTGCTGAGA
____________________________________________________________
consensus CGCAAGGCCCTGTATGCTTCCAAGATTATCTCCTATGCTCAAGGCTTCATGCTGCTGAGA
. : . : . : . : . : . :
gi|33491161|gb|CF257+ CAAGCACCCAA-GAATTCGGCTGGACGCTGAATTATGGTGGCATTGCACTGATGTGGAGG
gi|25848797|gb|BU340+ CAAGCAGCCA
gi|25848172|gb|BU340+ CAAGCAG
gi|25529269|gb|BU261+ CAAGCAGCCA
gi|25895934|gb|BU387+ CAAGCAGCCAAAGAATTCGGCTGGACGCTGAATTATGGTGGCATTGCACTGATGTGGAGG
gi|25328512|gb|BU119+ CAAGCAGCCAAAGAATTCGGCTGGACGCTGAATTATGGTGGCATTGCACTGATGTGGAGG
gi|28594847|gb|BX272+ CAAGCAGCCAAAGAATTCGGCTGGACGCTGAATTATGGTGGCATTGCACTGATGTGGAGG
gi|25862694|gb|BU354+ CAAGCAGCCAAAGAATTTGGCTGGACGCTGAATTATGGTGGCATTGCACTGATGTGGAGG
gi|28585438|gb|BX262+ CAAGCAGCCAAAGAATTCGGCTGGACGCTGAATTATGGTGGCATTGCACTGATGTGGAGG
gi|28589005|gb|BX266+ CAAGCAGCCAAAGAATTCGGCTGGACGCTGAATTATGGTGGCATTGCACTGATGTGGAGG
gi|25858518|gb|BU350+ CAAGCAGCCAAAGAATTCGGCTGGACGCTGAATTATGGTGGCATTGCACTGATGTGGAGG
gi|25945855|gb|BU456+ CAAGCAGCCAAAGAATTCGGCTGGACGCTGAATTATGGTGGCATTGCACTGATGTGGAGG
gi|25494212|gb|BU246+ CAAGCAGCCAAAGAATTCGGCTGGACGCTGAATTATGGTGGCAT-GCACTGATGTGGAGG
gi|25753639|gb|BU303+ CAAGCAGCCAAAGAATTCGGCTGGACGCTGAATTATGGTGGCATTGCACTGATGTGGAGG
gi|25742223|gb|BU292+ CAAGCAGCCAAAGAATTCGGCTGGACGCTGAATTATGGTGGCATTGCACTGATGTGGAGG
gi|25966977|gb|BU473+ CAAGCAGCCAAAGAATTCGGCTGGACGCTGAATTATGGTGGCATTGCACTGATGTGGAGG
gi|25965517|gb|BU471+ CAAGCAGCCAAAGAATTCGGCTGGACGCTGAATTATGGTGGCATTGCACTGATGTGGAGG
gi|41331966|gb|CK610+ CAAGCAGCCAAAGAATTCGGCTGGACGCTGAATTATGGTGGCATTGCACTGATGTGGAGG
gi|25829674|gb|BU321+ CAAGCAGCCAAAGAATTCGGCTGGACGCTGAATTATGGTGGCATTGCACTGATGTGGAGG
gi|25767238|gb|BU398+ CAAGCAGCCAAAGAATTCGGCTGGACGCTGAATTATGGTGGCATTGCACTGATGTGGAGG
gi|25871604|gb|BU363+ CAAGCAGCCAAAGAATTCGGCTGGACGCTGAATTATGGTGGCATTGCACTGATGTGGAGG
gi|25853302|gb|BU345+ CAAGCAGCCAAAGAATTCGGCTGGACGCTGAATTATGGTGGCATTGCACTGATGTGGAGG
gi|13163699|gb|AL584+ CAAGCAGCCAAAGAATTCGGCTGGACGCTGAATTATGGTGGCATTGCACTGATGTGGAGG
gi|25516018|gb|BU256+ CAAGCAGCCAAAGAATTCGGCTGGACGCTGAATTATGGTGGCATTGCACTGATGTGGAGG
gi|25863519|gb|BU355+ CAAGCAGCCAAAGAATTCGGCTGGACGCTGAATTATGGTGGCATTGCACTGATGTGGAGG
gi|28585716|gb|BX263+ CAAGCAGCCAAAGAATTCGGCTGGACGCTGAATTATGGTGGCATTGCACTGATGTGGAGG
gi|13192056|gb|AL587+ CAAGCAGCCAAAGAATTCGGCTGGACGCTGAATTATGGTGGCATTGCACTGATGTGGAGG
gi|25964859|gb|BU471+ CAAGCAGCCAAAGAATTCGGCTGGACGCTGAATTATGGTGGCATTGCACTGATGTGGAGG
gi|28589004|gb|BX266- CAAGCAGCCAAAGAATTCGGCTGGACGCTGAATTATGGTGGCATTGCACTGATGTGGAGG
gi|25390361|gb|BU214+ AAGAATTCGGCTGGACGCTGAATTATGGTGGCATTGCACTGATGTGGAGG
gi|7130413|gb|AJ3974+ CAAGCAGCCAAAGAATTCGGCTGGACGCTGAATTATGGTGGCATTGCACTGATGTGGAGG
gi|28585437|gb|BX262- CAAGCAGCCAAAGAATTCGGCTGGACGCTGAATTATGGTGGCATTGCACTGATGTGGAGG
gi|28585715|gb|BX263- CAAGCAGCCAAAGAATTCGGCTGGACGCTGAATTATGGTGGCATTGCACTGATGTGGAGG
____________________________________________________________
consensus CAAGCAGCCAAAGAATTCGGCTGGACGCTGAATTATGGTGGCATTGCACTGATGTGGAGG
. : . : . : . : . : . :
gi|33491161|gb|CF257+ GG-AGGCTGCATCATCAGAAGTGTGTTCCTG
gi|25895934|gb|BU387+ GG-AGGCTGCATCATCAGAAGTGTGTTCCTGGGAACAAATCAAAGACGCTTTTTGATCGA
gi|25328512|gb|BU119+ GGGAGGCTGCATCATCAGAAGTGTGTTCCTGGGAA-AAATCAAAGACGCTTTT-GATCGA
gi|28594847|gb|BX272+ GG-AGGCTGCATCATCAGAAGTGTGTTCCTGGGAA-AAATCAAAGACGCTTTT-GATCGA
gi|25862694|gb|BU354+ GG-AGGCTGCATCATCAGAAGTGTGTTCCTGGGAA-AAATCAAAGACGCTTTT-GATCGA
gi|28585438|gb|BX262+ GG-AGGCTGCATCATCAGAAGTGTGTTCCTGGGAA-AAATCAAAGACGCTTTT-GATCGA
gi|28589005|gb|BX266+ GG-AGGCTGCATCATCAGAAGTGTGTTCCTGGGAA-AAATCAAAGACGCTTTT-GATCGA
gi|25858518|gb|BU350+ GG-AGGCTGCATCATCAGAAGTGTGTTCCTGGGAA-AAATCAAAGACGCTTTT-GATCGA
gi|25945855|gb|BU456+ GG-AGGCTGCATCATCAGAAGTGTGTTCCTGGGAA-AAATCAAAGACGCTTGTTGATCGA
gi|25494212|gb|BU246+ GG-AGGCTGCATCATCAGAAGTGTGTTCCTGGGAA-AAATCAAAGACGCTTTT-GATCGA
gi|25753639|gb|BU303+ GG-AGGCTGCATCATCAGAAGTGTGTTCCTGGGAA-AAATCAAAGACGCTTTT-GATCGA
gi|25742223|gb|BU292+ GG-AGGCTGCATCATCAGAAGTGTGTTCCTGGGAA-AAATCAAAGACGCTTTT-GATCGA
gi|25966977|gb|BU473+ GG-AGGCTGCATCATCAGAAGTGTGTTCCTGGGAA-AAATCAAAGACGCTTTT-GATCGA
gi|25965517|gb|BU471+ GG-AGGCTGCATCATCAGAAGTGTGTTCCTGGGAA-AAATCAAAGACGCTTTT-GATCGA
gi|41331966|gb|CK610+ GG-AGGCTGCATCATCAGAAGTGTGTTCCTGGGAA-AAATCAAAGACGCTTTT-GATCGA
gi|25829674|gb|BU321+ GG-AGGCTGCATCATCAGAAGTGTGTTCCTGGGAA-AAATCAAAGACGCTTTT-GATCGA
gi|25767238|gb|BU398+ GG-AGGCTGCATCATCAGAAGTGTGTTCCTGGGAA-AAATCAAAGACGCCTTT-GATCGA
gi|25871604|gb|BU363+ GG-AGGCTGCATCATCAGAAGTGTGTTCCTGGGAA-AAATCAAAGACGCTTTT-GATCGA
gi|25853302|gb|BU345+ GG-AGGCTGCATCATCAGAAGTGTGTTCCTGGGAA-AAATCAAAGACGCTTTT-GATCGA
gi|13163699|gb|AL584+ GG-AGGCTGCATCATCAGAAGTGTGTTCCTGGGAA-AAATCAAAGACGCTTTT-GATCGA
gi|25516018|gb|BU256+ GG-AGGCTGCATCATCAGAAGTGTGTTCCTGGGAA-AAATCAAAGACGCTTTT-GATCGA
gi|25863519|gb|BU355+ GG-AGGCTGCATCATCAGAAGTGTGTTCCTGGGAA-AAATCAAAGACGCTTTT-GATCGA
gi|28585716|gb|BX263+ GG-AGGCTGCATCATCAGAAGTGTGTTCCTGGGAA-AAATCAAAGACGCTTTT-GATCGA
gi|13192056|gb|AL587+ GG-AGGCTGCATCATCAGAAGTGTGTTCCTGGGAA-AAATCAAAGACGCTTTT-GATCGA
gi|25964859|gb|BU471+ GG-AGGCTGCATCATCAGAAGTGTGTTCCTGGGAA-AAATCAAAGACGCTTTT-GATCGA
gi|28594846|gb|BX272- GTTCCTGGGAA-AAATCAAAGACGCTTTT-GATCGA
gi|28589004|gb|BX266- GG-AGGCTGCATCATCAGAAGTGTGTTCCTGGGAA-AAATCAAAGACGCTTTT-GATCGA
gi|25390361|gb|BU214+ GG-AGGCTGCATCATCAGAAGTGTGTTCCTGGGAA-AAATCAAAGACGCTTTT-GATCGA
gi|7130413|gb|AJ3974+ GG-AGGCTGCATCATCAGAAGTGTGTTCCTGGGAA-AAATCAAAGACGCTTTT-GATCGA
gi|28585437|gb|BX262- GG-AGGCTGCATCATCAGAAGTGTGTTCCTGGGAA-AAATCAAAGACGCTTTT-GATCGA
gi|28585715|gb|BX263- GG-AGGCTGCATCATCAGAAGTGTGTTCCTGGGAA-AAATCAAAGACGCTTTT-GATCGA
____________________________________________________________
consensus GG-AGGCTGCATCATCAGAAGTGTGTTCCTGGGAA-AAATCAAAGACGCTTTT-GATCGA
. : . : . : . : . : . :
gi|25895934|gb|BU387+ AAACCCTGAACTTCAGAATTTGGCTGTTGGATTGATTTTCTTTAA-GACA-GCTGTGAAA
gi|25328512|gb|BU119+ AA-CCCTGAACTTCAGAATTTG-CTGTTGGAT-GATTT-CTTTAA-GACAAGCTGTAGAA
gi|28594847|gb|BX272+ AA-CCCTGAACTTCAGAATTTG-CTGTTGGAT-GATTT-CTTTAA-GACA-GCTGTAGAA
gi|25862694|gb|BU354+ AA-CCCTGAACTTCAGAATTTG-CTGTTGGAT-GATTT-CTTTAA-GACA-GCTGTAGAA
gi|28585438|gb|BX262+ AA-CCCTGAACTTCAGAATTTG-CTGTTGGAT-GATTT-CTTTAA-GACA-GCTGTAGAA
gi|28589005|gb|BX266+ AA-CCCTGAACTTCAGAATTTG-CTGTTGGAT-GATTT-CTTTAA-GACA-GCTGTAGAA
gi|25858518|gb|BU350+ AA-CCCTGAACTTCAGAATTTG-CTGTTGGAT-GATTT-CTTTAA-GACA-GCTGTAGAA
gi|25945855|gb|BU456+ AA-CCCTGAACTTCAGAATTTG-CTGTTGGCATGATTT-CTTTAA-GACA-GCTGTAGAA
gi|25494212|gb|BU246+ AA-CCCTGAACTTCAGAATTTG-CTGTTGGAT-GATTT-CTTTAA-GACA-GCTGTAGAA
gi|25753639|gb|BU303+ AA-CCCTGAACTTCAGAATTTG-CTGTTGGAT-GATTT-CTTTAA-GACA-GCTGTAGAA
gi|25742223|gb|BU292+ AA-CCCTGAACTTCAGAATTTG-CTGTTGGAT-GATTT-CTTTAA-GACA-GCTGTAGAA
gi|25966977|gb|BU473+ AA-CCCTGAACTTCAGAATTTG-CTGTTGGAT-GATTT-CTTTAA-GACA-GCTGTAGAA
gi|25965517|gb|BU471+ AA-CCCTGAACTTCAGAATTTG-CTGTTGGAT-GATTT-CTTTAA-GACA-GCTGTAGAA
gi|41331966|gb|CK610+ AA-CCCTGAACTTCAGAATTTG-CTGTTGGAT-GATTT-CTTTAA-GACA-GCTGTAGAA
gi|25829674|gb|BU321+ AA-CCCTGAACTTCAGAATTTG-CTGTTGGAT-GATTT-CTTTAA-GACA-GCTGTAGAA
gi|25767238|gb|BU398+ AA-CCCTGAACTTCAGAATTTG-CTGTTGGAT-GATTT-CTTTAA-GACA-GCTGTAGAA
gi|25871604|gb|BU363+ AA-CCCTGAACTTCAGAATTTG-CTGTTGGAT-GATTT-CTTTAA-GACA-GCTGTAGAA
gi|25853302|gb|BU345+ AA-CCCTGAACTTCAGAATTTG-CTGTTGGAT-GATTT-CTTTAA-GACA-GCTGTAGAA
gi|13163699|gb|AL584+ AA-CCCTGAACTTCAGAATTTG-CTGTTGGAT-GATTT-CTTTAA-GACA-GCTGTAGAA
gi|25516018|gb|BU256+ AA-CCCTGAACTTCAGAATTTG-CTGTTGGAT-GATTT-CTTTAA-GACA-GCTGTAGAA
gi|25863519|gb|BU355+ AA-CCCTGAACTTCAGAATTTG-CTGTTGGAT-GATTT-CTTTAAAGACA-GCTGTAGAA
gi|28585716|gb|BX263+ AA-CCCTGAACTTCAGAATTTG-CTGTTGGAT-GATTT-CTTTAA-GACA-GCTGTAGAA
gi|13192056|gb|AL587+ AA-CCCTGAACTTCAGAATTTG-CTGTTGGAT-GATTT-CTTTAA-GACA-GCTGTAGAA
gi|25964859|gb|BU471+ AA-CCCTGAACTTCAGAATTTG-CTGTTGGAT-GATTT-CTTTAA-GACA-GCTGTAGAA
gi|28594846|gb|BX272- AA-CCCTGAACTTCAGAATTTG-CTGTTGGAT-GATTT-CTTTAA-GACA-GCTGTAGAA
gi|28589004|gb|BX266- AA-CCCTGAACTTCAGAATTTG-CTGTTGGAT-GATTT-CTTTAA-GACA-GCTGTAGAA
gi|25390361|gb|BU214+ AA-CCCTGAACTTCAGAATTTG-CTGTTGGAT-GATTT-CTTTAA-GACA-GCTGTAGAA
gi|7130413|gb|AJ3974+ AA-CCCTGAACTTCAGAATTTG-CTGTTGGAT-GATTT-CTTTAA-GACA-GCTGTAGAA
gi|28585437|gb|BX262- AA-CCCTGAACTTCAGAATTTG-CTGTTGGAT-GATTT-CTTTAA-GACA-GCTGTAGAA
gi|28585715|gb|BX263- AA-CCCTGAACTTCAGAATTTG-CTGTTGGAT-GATTT-CTTTAA-GACA-GCTGTAGAA
____________________________________________________________
consensus AA-CCCTGAACTTCAGAATTTG-CTGTTGGAT-GATTT-CTTTAA-GACA-GCTGTAGAA
. : . : . : . : . : . :
gi|25895934|gb|BU387+ AAA-TGCCAGGACTCC-GGGCGACACGTAAATCAGTACCGGAGT
gi|25328512|gb|BU119+ AAA-TGCCAGGACTCCTGGGCGACACGTAA-TCAGTACTGGAGTCCAGCATGGTAATCC-
gi|25862694|gb|BU354+ AAA-TGCCAGGACTCCTGG-CGACACGTAA-TCAGTACTGGAGTCCAGCATGGTATTCCC
gi|28585438|gb|BX262+ AAA-TGCCAGGACTCCTGG-CGACACGTAA-TCAGTACTGGAGTCCAGCATGGTATTCC-
gi|28589005|gb|BX266+ AAA-TGCCAGGACTCCTGG-CGACACGTAA-TCAGTACTGGAGTCCAGCATGGTATTCC-
gi|25858518|gb|BU350+ AAA-TGCCAGGACTCCTGG-CGACACGTAA-TCAGTACTGGAGTCCAGCATGGTATTCC-
gi|25945855|gb|BU456+ AAA-TGCCAGGACTCCTGGCTGACACGTAA-TCAGTACTGGAGTCCAGCATGGTATTCC-
gi|25494212|gb|BU246+ AAA-TGCCAGGACTCCTGG-CGACACGTAA-TCAGTACTGGAGTCCAGCATGGTATTCC-
gi|25753639|gb|BU303+ AAA-TGCCAGGACTCCTGG-CGACACGTAA-TCAGTACTGGAGTCCAGCATGGTATTCC-
gi|25742223|gb|BU292+ AAA-TGCCAGGACTCCTGG-CGACACGTAA-TCAGTACTGGAGTCCAGCATGGTATTCC-
gi|25966977|gb|BU473+ AAA-TGCCAGGACTCCTGG-CGACACGTAA-TCAGTACTGGAGTCCAGCATGGTATTCC-
gi|25965517|gb|BU471+ AAA-TGCCAGGACTCCTGG-CGACACGTAA-TCAGTACTGGAGTCCAGCATGGTATTCC-
gi|41331966|gb|CK610+ AAA-TGCCAGGACTCCTGG-CGACACGTAA-TCAGTACTGGAGTCCAGCATGGTATTCC-
gi|25829674|gb|BU321+ AAA-TGCCAGGACTCCTGG-CGACACGTAA-TCAGTACTGGAGTCCAGCATGGTATTCC-
gi|25767238|gb|BU398+ AAA-TGCCAGGACTCCTGG-CGACACGTAA-TCAGTACTGGAGTCCAGCATGGTATTCC-
gi|25871604|gb|BU363+ AAA-TGCCAGGACTCCTGG-CGACACGTAA-TCAGTACTGGAGTCCAGCATGGTATTCC-
gi|25853302|gb|BU345+ AAA-TGCCAGGACTCCTGG-CGACACGTAA-TCAGTACTGGAGTCCAGCATGGTATTCC-
gi|13163699|gb|AL584+ AAA-TGCCAGGACTCCTGG-CGACACGTAA-TCAGTACTGGAGTCCAGCATGGTATTCC-
gi|25516018|gb|BU256+ AAA-TGCCAGGACTCCTGG-CGACACGTAA-TCAGTACTGGAGTCCAGCATGGTATTCC-
gi|25863519|gb|BU355+ AAAATGCCAGGACTCCTGG-CGACACGTAA-TCAGTACTGGAGTCCAGCATGGTATTCC-
gi|28585716|gb|BX263+ AAA-TGCCAGGACTCCTGG-CGACACGTAA-TCAGTACTGGAGTCCAGCATGGTATTCC-
gi|13192056|gb|AL587+ AAA-TGCCAGGACTCCTGG-CGACACGTAA-TCAGTACTGGAGTCCAGCATGGTATTCC-
gi|25964859|gb|BU471+ AAA-TGCCAGGACTCCTGG-CGACACGTAA-TCAGTACTGGAGTCCAGCATGGTATTCC-
gi|28594846|gb|BX272- AAA-TGCCAGGACTCCTGG-CGACACGTAA-TCAGTACTGGAGTCCAGCATGGTATTCC-
gi|28589004|gb|BX266- AAA-TGCCAGGACTCCTGG-CGACACGTAA-TCAGTACTGGAGTCCAGCATGGTATTCC-
gi|25390361|gb|BU214+ AAA-TGCCAGGACTCCTGG-CGACACGTAA-TCAGTACTGGAGTCCAGCATGGTATTCC-
gi|7130413|gb|AJ3974+ AAA-TGCCAGGACTCCTGG-CGACACGTAA-TCAGTACTGGAGTCCAGCATGGTATTCC-
gi|28585437|gb|BX262- AAA-TGCCAGGACTCCTGG-CGACACGTAA-TCAGTACTGGAGTCCAGCATGGTATTCC-
gi|28585715|gb|BX263- AAA-TGCCAGGACTCCTGG-CGACACGTAA-TCAGTACTGGAGTCCAGCATGGTATTCC-
____________________________________________________________
consensus AAA-TGCCAGGACTCCTGG-CGACACGTAA-TCAGTACTGGAGTCCAGCATGGTATTCC-
. : . : . : . : . : . :
gi|25328512|gb|BU119+ TATGCCCTG--TTCACTACAGCACCTTCCTTTTAT-GATGGATACAGACTTGAAG-TGCT
gi|25862694|gb|BU354+ TATGCCCTGC-TTCACTACAGCACTTTCCTTTTAT-GATGGATACAGACATGAAG-TGCT
gi|28585438|gb|BX262+ TATGCCCTGC-TTCACTACAG
gi|28589005|gb|BX266+ TATGCCCTGC-TTCACTACAGCACTTTCCTTTTAT-GATGGATACAGACATGAAG-TGCT
gi|25858518|gb|BU350+ TATGCCCTGC-TTCACTACAGCACTTTCCTTTTAT-GATGGATACAGACATGAAG-TGCT
gi|25945855|gb|BU456+ TATGCCCTGCGTTCACTACAGCACTTTCCTTTTAT-GATGGATACAGACATGAAG-TGCT
gi|25494212|gb|BU246+ TATGCCCTGC-TTCACTACAGCACTTTCCTTTTAT-GATGGATACAGACATGAAG-TGCT
gi|25753639|gb|BU303+ TATGCCCTGC-TTCACTACAGCACTTTCCTTTTAT-GATGGATACAGACATGAAG-TGCT
gi|25742223|gb|BU292+ TATGCCCTGC-TTCACTACAGCACTTTCCTTTTAT-GATGGATACAGACATGAAG-TGCT
gi|25966977|gb|BU473+ TATGCCCTGC-TTCACTACAGCACTTTCCTTTTAT-GATGGATACAGACATGAAG-TGCT
gi|25965517|gb|BU471+ TATGCCCTGC-TTCACTACAGCACTTTCCTTTTAT-GATGGATACAGACATGAAG-TGCT
gi|41331966|gb|CK610+ TATGCCCTGC-TTCACTACAGCACTTTCC
gi|25829674|gb|BU321+ TATGCCCTGC-TTCACTACAGCACTTTCCTTTTATTGATGGATACAGACATGAAG-TGCT
gi|25767238|gb|BU398+ TATGCCCTGC-TTCACTACAGCACTTTCCTTTTAT-GATGGATACAGACATGAAG-TGCT
gi|25871604|gb|BU363+ TATGCCCTGC-TTCACTACAGCACTTTCCTTTTAT-GATGGATACAGACATGAAG-TGCT
gi|25853302|gb|BU345+ TATGCCCTGC-TTCACTACAGCACTTTCCTTTTAT-GATGGATACAGACATGAAG-TGCT
gi|13163699|gb|AL584+ TATGCCCTGC-TTCACTACAGCACTTTCCTTTTAT-GATGGATACAGACATGAAG-TGCT
gi|25516018|gb|BU256+ TATGCCCTGC-TTCACTACAGCACTTTCCTTTTAT-GATGGATACAGACATGAAG-TGCT
gi|25863519|gb|BU355+ TATGCCCTG--TTCACTACAGCACTTTCCTTTTAT-GATGGATACAGACATGAAGGTGCT
gi|28585716|gb|BX263+ TATGCCCTGC-TTCACTACAGCACTTTCCTTTTAT-GATGGATACAGACATGAAG-TGCT
gi|13192056|gb|AL587+ TATGCCCTGC-TTCACTACAGCACTTTCCTTTTAT-GATGGATACAGACATGAAG-TGCT
gi|25964859|gb|BU471+ TATGCCCTGC-TTCACTACAGCACTTTCCTTTTAT-GATGGATACAGACATGAAG-TGCT
gi|28594846|gb|BX272- TATGCCCTGC-TTCACTACAGCACTTTCCTTTTAT-GATGGATACAGACATGAAG-TGCT
gi|28589004|gb|BX266- TATGCCCTGC-TTCACTACAGCACTTTCCTTTTAT-GATGGATACAGACATGAAG-TGCT
gi|25390361|gb|BU214+ TATGCCCTGC-TTCACTACAGCACTTTCCTTTTAT-GATGGATACAGACATGAAG-TGCT
gi|7130413|gb|AJ3974+ TATGCCCTGC-TTCACTACAGCACTTTCCTTTTAT-GATGGATACAGACATGAAG-TGCT
gi|28585437|gb|BX262- TATGCCCTGC-TTCACTACAGCACTTTCCTTTTAT-GATGGATACAGACATGAAG-TGCT
gi|28585715|gb|BX263- TATGCCCTGC-TTCACTACAGCACTTTCCTTTTAT-GATGGATACAGACATGAAG-TGCT
____________________________________________________________
consensus TATGCCCTGC-TTCACTACAGCACTTTCCTTTTAT-GATGGATACAGACATGAAG-TGCT
. : . : . : . : . : . :
gi|25328512|gb|BU119+ TGCCAGCTAACCTGATCCAGGC
gi|28589005|gb|BX266+ -GCCAGCTAACCTGATCCAGGC-TCAGCG-TGATTACTTTGGTGCACAT-ACATATGAGT
gi|13163699|gb|AL584+ -GCCAGCTAACCTGATCCAGGC-TCAGCG-TGATTACTTTGGTGCACAT-ACATATGAGT
gi|25516018|gb|BU256+ -GCCAGCTAACCTGATCCAGGC-TCAGCG-TGATTACTTTGGTGCACATTACATATGAGT
gi|25863519|gb|BU355+ -GCCAGCTAACCTGATCCAGGCCTCAGCG-TGATTACTTTGGTGCACAT-ACATATGAGT
gi|28585716|gb|BX263+ -GCCAGCTAACCTGATCCAGGC-TCAGCG-TGATTACTTTGGTGCACAT-ACATATGAGT
gi|13192056|gb|AL587+ -GCCAGCTAACCTGATCCAGGC-TCAGCG-TGATTACTTTGGTGCACAT-ACATATGAGT
gi|25964859|gb|BU471+ AGCCAGCTAACCTGATCCAGGGCTCAGCGGTGATTACTTTGGTGCACAT-ACATATGAGT
gi|28594846|gb|BX272- -GCCAGCTAACCTGATCCAGGC-TCAGCG-TGATTACTTTGGTGCACAT-ACATATGAGT
gi|28589004|gb|BX266- -GCCAGCTAACCTGATCCAGGC-TCAGCG-TGATTACTTTGGTGCACAT-ACATATGAGT
gi|25835882|gb|BU327+ ATATGAGT
gi|7130413|gb|AJ3974+ -GCCAGCTAACCTGATCCAGGC-TCAGCG-TGATTACTTTGGTGCACAT-ACATATGAGT
gi|28585437|gb|BX262- -GCCAGCTAACCTGATCCAGGC-TCAGCG-TGATTACTTTGGTGCACAT-ACATATGAGT
gi|28585715|gb|BX263- -GCCAGCTAACCTGATCCAGGC-TCAGCG-TGATTACTTTGGTGCACAT-ACATATGAGT
____________________________________________________________
consensus -GCCAGCTAACCTGATCCAGGC-TCAGCG-TGATTACTTTGGTGCACAT-ACATATGAGT
. : . : . : . : . : . :
gi|28589005|gb|BX266+ TGTTATCGAA-GCCAGG-TGTATTT-ATCCATACTAA-CTGG-ACAG-GCCATGGAGGAA
gi|13163699|gb|AL584+ TGTTATCGAA-GCCAGG-TGTATTT-ATCCATACTAA
gi|25516018|gb|BU256+ TGTTATCGAA-GCCAGG-TGTATTT-ATCCATACTAA-CTGG-ACAG-GCCATGGAGGAA
gi|25863519|gb|BU355+ TGTTATCGAAAGCCAGG-TGTATTTTATCCATACTAA-CTGGGACAGTGCCATGGAGGAA
gi|28585716|gb|BX263+ TGTTATCGAA-GCCAGG-TGTATTT-ATCCATACTAA-CTGG-ACAG-GCCATGGAGGAA
gi|13192056|gb|AL587+ TGTTATCGAA-GCCAGG-TGTATTT-ATCCATACTAA-CTGG-ACAG-GCCATGGAGGAA
gi|25964859|gb|BU471+ TGTTATCGAA-GCCAGGGTGTATTT-ATCCATACTAAACTGG-ACAG-GCCATGGAGGAA
gi|28594846|gb|BX272- TGTTATCGAA-GCCAGG-TGTATTT-ATCCATACTAA-CTGG-ACAG-GCCATGGAGGAA
gi|28589004|gb|BX266- TGTTATCGAA-GCCAGG-TGTATTT-ATCCATACTAA-CTGG-ACAG-GCCATGGAGGAA
gi|25835882|gb|BU327+ TGTTATCGAA-GCCAGG-TGTATTT-ATCCATACTAA-CTGG-ACAG-GCCATGGAGGAA
gi|7130413|gb|AJ3974+ TGTTATCGAA-GCCAGG-TGTATTT-ATCCATACTAA-CTGG-ACAG-GCCATGGAGGAA
gi|28585437|gb|BX262- TGTTATCGAA-GCCAGG-TGTATTT-ATCCATACTAA-CTGG-ACAG-GCCATGGAGGAA
gi|28585715|gb|BX263- TGTTATCGAA-GCCAGG-TGTATTT-ATCCATACTAA-CTGG-ACAG-GCCATGGAGGAA
____________________________________________________________
consensus TGTTATCGAA-GCCAGG-TGTATTT-ATCCATACTAA-CTGG-ACAG-GCCATGGAGGAA
. : . : . : . : . : . :
gi|28589005|gb|BX266+ ATGT-GTCCTCTTCTGCCT
gi|25516018|gb|BU256+ ATGT-GTCCTCTTCTGCCTACAAT-GTCTAATGGAAAACATTCCCTCTTGA
gi|25863519|gb|BU355+ ATGTTGTCCTCTTCTGCCTACCATTGTCTAATGGAAA-CATTCCCTCTTGAAGGCTGAGA
gi|28585716|gb|BX263+ ATGT-GTCCTCTTCTGCCTACAAT-GTCTAATGGAAA-CATTCCCTCTTGAAG-CTGAGA
gi|13192056|gb|AL587+ ATGT-GTCCTCTTCTGCCTACAAT-GTCTAATGGAAA-CATTCCCTCTTGAAG-CTGAGA
gi|25964859|gb|BU471+ ATGT-GTCCTCTTCTGCCTACAATGGTCTAATGGAAA-CATTCCCTCTTGAAG-CTGAGA
gi|28594846|gb|BX272- ATGT-GTCCTCTTCTGCCTACAAT-GTCTAATGGAAA-CATTCCCTCTTGAAG-CTGAGA
gi|28589004|gb|BX266- ATGT-GTCCTCTTCTGCCTACAAT-GTCTAATGGAAA-CATTCCCTCTTGAAG-CTGAGA
gi|25835882|gb|BU327+ ATGT-GTCCTCTTCTGCCTACAAT-GTCTAATGGAAA-CATTCCCTCTTGAAG-CTGAGA
gi|7130413|gb|AJ3974+ ATGT-GTCCTCTTCTGCCTACAAT-GTCTAATGGAAA-CATTCCCTCTTGAAG-CTGAGA
gi|28585437|gb|BX262- ATGT-GTCCTCTTCTGCCTACAAT-GTCTAATGGAAA-CATTCCCTCTTGAAG-CTGAGA
gi|28585715|gb|BX263- ATGT-GTCCTCTTCTGCCTACAAT-GTCTAATGGAAA-CATTCCCTCTTGAAG-CTGAGA
____________________________________________________________
consensus ATGT-GTCCTCTTCTGCCTACAAT-GTCTAATGGAAA-CATTCCCTCTTGAAG-CTGAGA
. : . : . : . : . : . :
gi|25863519|gb|BU355+ TACTATAGAATCTC
gi|28585716|gb|BX263+ TACTATAGA-TCT
gi|13192056|gb|AL587+ TACTATAG
gi|25964859|gb|BU471+ TACTATAGGATCTCACGTATACCCTCTGTGAACGGCCCCTTTTTTACTGGTACTGTTAGA
gi|28594846|gb|BX272- TACTATAGA-TCTCACGTATTCC-TCTGTGAACGCCCC--TTTTTACTG-TACTGTTAGA
gi|28589004|gb|BX266- TACTATAGA-TCTCACATATTCC-TCTGTGAACGCCCC--TTTTTACTG-TACTGTTAGA
gi|25835882|gb|BU327+ TACTATAGA-TCTCACATATTCC-TCTGTGAACGCCCC--TTTTTACTG-TACTGTTAGA
gi|7130413|gb|AJ3974+ TACTATAGA-TCTCACATATTCC-TCTGTGAACGCCCC--TTTTTACTG-TACTGTTAGA
gi|28585437|gb|BX262- TACTATAGA-TCTCACATATTCC-TCTGTGAACACCCC--TTTTTACTG-TACTGTTAGA
gi|28585715|gb|BX263- TACTATAGA-TCTCACATATTCC-TCTGTGAACGCCCC--TTTTTACTG-TACTGTTAGA
____________________________________________________________
consensus TACTATAGA-TCTCACATATTCC-TCTGTGAACGCCCC--TTTTTACTG-TACTGTTAGA
. : . : . : . : . : . :
gi|25964859|gb|BU471+ ACTTAGCATATAGCACACTTTTTGGTAATAAACTTGGTGGGGTATTATTTCACATTATTA
gi|28594846|gb|BX272- ACTT-GCATTT-GCACACTTTT--GTAATAA-CTTGT--GGGTAT-ATTTCACATA--TA
gi|28589004|gb|BX266- ACTT-GCATTT-GCACACTTTT--GTAATAA-CTTGT--GGGTAT-ATTTCACATA--TA
gi|25835882|gb|BU327+ ACTT-GCATTT-GCACACTTTT--GTAATAA-CTTGT--GGGTAT-ATTTCACATA--TA
gi|7130413|gb|AJ3974+ ACTT-GCATTT-GCACACTTTT--GTAATAA-CTTGT--GGGTAT-ATTTCACATA--TA
gi|28585437|gb|BX262- ACTT-GCATTT-GCACACTTTT--GTAATAA-CTTGT--GGGTAT-ATTTCACATA--TA
gi|28585715|gb|BX263- ACTT
____________________________________________________________
consensus ACTT-GCATTT-GCACACTTTT--GTAATAA-CTTGT--GGGTAT-ATTTCACATA--TA
. : . : . : . : . : . :
gi|25964859|gb|BU471+ TAAGAAAGCCTAAAGTAAACCCTGGTTGATTACGGTGCCTAAAAAC
gi|28594846|gb|BX272- TAAGAAAGC-TAAA-TAAACC-TGCTTG--TACG-TACAAAAAA
gi|28589004|gb|BX266- TAAGAAAGC-TAAA-TAAACC-TGCTTG--TACG-TAAAAAAAA
gi|25835882|gb|BU327+ TAAGAAAGC-TAAA-TAAACC-TGCTTG--TACG-TA
gi|7130413|gb|AJ3974+ TAAGAAAGC
gi|28585437|gb|BX262- TAAGAAAGC-TAAA-TAAACC-TGCTTG--TACG-TAAAAAAAA
____________________________________________________________
consensus TAAGAAAGC-TAAA-TAAACC-TGCTTG--TACG-TACAAAAAAAC