genewise output Score 864.52 bits over entire alignment Scores as bits over a synchronous coding model Warning: The bits scores is not probablistically correct for single seqs See WWW help for more info pir|G01922 1 MAQADIALIGLAVMGQNLILNMNDHGFV + +ADIALIGLAVMGQNLILNMNDHGFV LPRADIALIGLAVMGQNLILNMNDHGFV poulet2 676 ccaggagtagcggagcacacaaagcgtgGTAAGTG Intron 1 tcgcatcttgtcttgaatttataaagtt<0-----[760 : 1165] tcatttggcagcggtgcgtgcgctcccg pir|G01922 29 VCAFNRTVSKVDDFLANEAKGTKVVGAQSLKEMVSKLKKPRRIILL VCAFNRTVSKVDDFLANEAKGTKV+GA SL+EMVSKLKKPRRIILL VCAFNRTVSKVDDFLANEAKGTKVIGAHSLEEMVSKLKKPRRIILL poulet2 1163 CAGgtgtaaagtagggtcgaggagaagaggcacggagtacaacccaatc -0>tgctagctcataattcaacagcattgcagtaattcataacggtttt ccttcggtcagtctgctgcaacagcttccggggcgggggtacccgg pir|G01922 75 VKAGQAVDDFIEKL VPLLDTGDIIID VKAG AVDDFI KL VPLL+TGDIIID VKAGSAVDDFINKL VPLLETGDIIID poulet2 1304 gaggaggggtaaatGTGAGGC Intron 2 CAGgcttgaggaaag tacggctaattaat<0-----[1346 : 1471]-0>tcttacgattta ggtatagttcctaa gggggtaccatt pir|G01922 101 GGNSEYRDTT RRCRDLKGKGILFVGS GGNSEYRDTT RRC++L KG+LFVGS GGNSEYRDTT RRCKELLQKGLLFVGS poulet2 1508 ggatgtagaaGTAAGCC Intron 3 CAGactagcccagcttgga ggacaagacc<0-----[1538 : 2710]-0>gggaattaagttttgg tgttgtatcg actggggaaccattat pir|G01922 127 GVSGGEEGPRYGPSLMPGGNKEA GVSGGEEG RYGPSLMPGG+KEA GVSGGEEGARYGPSLMPGGSKEA W:W[tgg] poulet2 2759 ggaggggggatgctcacggtaggTGGTAAGTG Intron 4 CAGG gtgggaagcgagccttcggcaac <2-----[2830 : 3555]-2> ttttagggcatttacgaaacaac pir|G01922 151 PHIKTIFQGIAAKVGTGEPCCDW VGD PHIKTIFQ IAAKVG+GEPCCDW VG+ PHIKTIFQSIAAKVGSGEPCCDW VGE poulet2 3557 ccaaaatcaaggaggtggcttgtGTAAATA Intron 5 CAGggg catacttagtccatgcgacggag<0-----[3626 : 3981]-0>tga atcgcatactttagatgatttcg aag pir|G01922 177 EGAGHFVKMVHNGIEYGDMQLICEAYHLMKDVLGMAQDEMAQ EGAGHFVKMVHNGIEYGDMQLICEAYHLMKDV+GM DEM+Q EGAGHFVKMVHNGIEYGDMQLICEAYHLMKDVVGMDHDEMSQ poulet2 3991 ggggctgaagcagagtggactatggtccaaggggagcggatc agcgattattaagtaagatattgacaattaattgtaaaatca gtcactggggctgtatacgggctgcccggattgcgcctggag pir|G01922 219 AFEDWNKTELDSFLIEITANILKFQD FE+WN TELDSFLIEITANILKF+D VFEEWNNTELDSFLIEITANILKFKD poulet2 4117 GTGATTT Intron 6 CAGgtggtaaagcgttcagaagaacatag <0-----[4117 : 4560]-0>ttaagaacatactttatccattataa ataagtctagctcgtacacttcacat pir|G01922 245 TDGKHLLPKIRDSAGQKGTGKWTAISALEYGVPVTLI DGK+LLPKIRDSAGQKGTGKWTAISALEYGVPVTLI KDGKYLLPKIRDSAGQKGTGKWTAISALEYGVPVTLI poulet2 4639 aggatcccaaagaggcagagatagatgcgtggcgaca aagaattcatgagcgaagcgagcctcctaagtctctt gtcacccagcgctaaaacgggggattcgatactctca pir|G01922 282 EAVFARCLSSLKDERIQASKKLK EAVFARCLSSLKDER+QASK L G:G[ggt] EAVFARCLSSLKDERVQASKLLN poulet2 4750 GGTAAATG Intron 7 AAGGTgggtgctcttcaggagcgaacca <1-----[4751 : 6599]-1> acttcggtcctaaagtacgatta gtgtagcggccgtgaggctgggt pir|G01922 306 GPQKFQFDGDKKSFLEDIRK ALYASK GP+ QF G+KK+FLEDIRK ALYASK GPKLTQFSGNKKAFLEDIRK ALYASK poulet2 6671 gcatactagaaagtcggacaGTGAGTC Intron 8 TAGgctgta gcatcatggaaacttaatga<0-----[6731 : 6872]-0>ctacca gtagtattgcggattgcacg cgttcg pir|G01922 332 IISYAQGFMLLRQAATEFGWTLNYGGIALMWRGGCIIR IISYAQGFMLLRQAA EFGWTLNYGGIALMWRGGCIIR IISYAQGFMLLRQAAKEFGWTLNYGGIALMWRGGCIIR poulet2 6891 aattgcgtaccacggagtgtacatggagcataggtaaa ttcacagttttgaccaatggctaaggtcttgggggttg tccttaccgggaaacaaccgggtttctaggggacccca pir|G01922 370 VFLGKIKDAFDRNPELQNLLLDD VFLGKIKDAFDRNPELQNLLLDD S:S[agt] VFLGKIKDAFDRNPELQNLLLDD poulet2 7005 AGGTAATTG Intron 9 TAGTgtcgaaaggtgcacgccatctgg <2-----[7007 : 7307]-2> tttgataactagacataatttaa gcgaacactttactatgtgggtt pir|G01922 394 FFKSAVENCQ DSWRRAVSTGVQAGIP FFK+AVE CQ DSWR +STGVQ GIP FFKTAVEKCQ DSWRHVISTGVQHGIP poulet2 7378 ttaagggatcGTGAGTT Intron 10 CAGgttccgaaaggccgac ttacctaaga<0-----[7408 : 8780]-0>acggattgcgtaagtc ctgataaacg ccgacacttacgtttt pir|G01922 420 MPCFTTALSFYDGYRHEMLPASLIQ A MPCFTTALSFYDGYRHE+LPA+LIQ A MPCFTTALSFYDGYRHEVLPANLIQ A poulet2 8829 acttaagctttggtacggccgacacGTAGGTG Intron 11 TAGg tcgtccctctaagagaattccatta<0-----[8904 : 9515]-0>c gccctaatctttacataggatcgcg t pir|G01922 446 QRDYFGAHTYELLAKPGQFIHTNWTGHGGTVSSSSYN QRDYFGAHTYELL+KPG FIHTNWTGHGG VSSS+YN QRDYFGAHTYELLSKPGVFIHTNWTGHGGNVSSSAYN poulet2 9519 ccgttggcatgtttacggtacaatagcggagtttgta agaatgcacaattcacgtttacagcgaggatccccaa gttcttatatggaggatatcttcgactaatgcttcct // Gene 1 Gene 676 9629 Exon 676 759 Exon 1166 1345 Exon 1472 1537 Exon 2711 2829 Exon 3556 3625 Exon 3982 4116 Exon 4561 4750 Exon 6600 6730 Exon 6873 7006 Exon 7308 7407 Exon 8781 8903 Exon 9516 9629 // >poulet2.pep LPRADIALIGLAVMGQNLILNMNDHGFVCAFNRTVSKVDDFLANEAKGTKVIGAHSLEEM VSKLKKPRRIILLVKAGSAVDDFINKLPLLETGDIIIDGGNSEYRDTTRCKELLQKGLLF VGSGVSGGEEGARYGPSLMPGGSKEAWPHIKTIFQSIAAKVGSGEPCCDWGEEGAGHFVK MVHNGIEYGDMQLICEAYHLMKDVVGMDHDEMSQFEEWNNTELDSFLIEITANILKFKDK DGKYLLPKIRDSAGQKGTGKWTAISALEYGVPVTLIGEAVFARCLSSLKDERVQASKLLN GPKLTQFSGNKKAFLEDIRKLYASKIISYAQGFMLLRQAAKEFGWTLNYGGIALMWRGGC IIRSVFLGKIKDAFDRNPELQNLLLDDFFKTAVEKCQSWRHVISTGVQHGIPMPCFTTAL SFYDGYRHEVLPANLIQQRDYFGAHTYELLSKPGVFIHTNWTGHGGNVSSSAYN // >poulet2.[676:9629].sp CTTCCCAGAGCTGATATTGCGTTGATCGGACTGGCCGTGATGGGTCAGAACCTGATTCTG AACATGAACGATCACGGCTTCGTGGTCTGCGCTTTTAACAGGACGGTTTCCAAAGTGGAT GACTTTCTGGCCAATGAGGCCAAAGGAACCAAAGTGATCGGTGCTCACAGCCTGGAGGAG ATGGTCTCGAAGCTGAAGAAGCCTCGACGCATCATCTTGCTGGTGAAGGCTGGAAGTGCA GTGGATGATTTCATCAATAAATTAGTGCCGTTGTTGGAGACTGGAGACATCATAATTGAT GGTGGGAATTCTGAGTATAGAGATACCACGAGACGCTGTAAGGAGCTGCTGCAAAAAGGC CTCTTATTTGTTGGAAGTGGTGTTAGTGGTGGAGAGGAGGGGGCCAGATATGGTCCTTCA CTCATGCCAGGAGGATCCAAAGAAGCCTGGCCACATATCAAGACCATATTTCAAAGCATT GCTGCTAAAGTGGGATCTGGGGAACCTTGTTGTGACTGGGTAGGAGAGGAGGGTGCCGGA CACTTTGTGAAGATGGTGCACAATGGGATTGAATATGGAGACATGCAGTTGATCTGTGAG GCCTACCACCTGATGAAAGATGTTGTGGGCATGGACCACGATGAGATGTCACAGGTATTT GAAGAATGGAATAACACTGAACTGGACTCTTTCCTGATTGAAATCACAGCCAATATTCTC AAATTCAAAGATAAGGATGGCAAATACCTCCTCCCAAAGATCAGGGACAGTGCAGGACAA AAAGGCACGGGGAAGTGGACGGCAATTTCTGCCCTGGAATATGGAGTCCCTGTCACTCTC ATAGGTGAGGCTGTGTTTGCACGGTGCCTGTCGTCCCTCAAGGATGAGAGAGTGCAGGCC AGTAAGCTGCTGAATGGGCCTAAATTGACTCAATTTAGTGGGAACAAGAAGGCATTTCTT GAGGACATACGCAAGGCCCTGTATGCTTCCAAGATTATCTCCTATGCTCAAGGCTTCATG CTGCTGAGACAAGCAGCCAAAGAATTCGGCTGGACGCTGAATTATGGTGGCATTGCACTG ATGTGGAGGGGAGGCTGCATCATCAGAAGTGTGTTCCTGGGAAAAATCAAAGACGCTTTT GATCGAAACCCTGAACTTCAGAATTTGCTGTTGGATGATTTCTTTAAGACAGCTGTAGAA AAATGCCAGGACTCCTGGCGACACGTAATCAGTACTGGAGTCCAGCATGGTATTCCTATG CCCTGCTTCACTACAGCACTTTCCTTTTATGATGGATACAGACATGAAGTGCTGCCAGCT AACCTGATCCAGGCTCAGCGTGATTACTTTGGTGCACATACATATGAGTTGTTATCGAAG CCAGGTGTATTTATCCATACTAACTGGACAGGCCATGGAGGAAATGTGTCCTCTTCTGCC TACAAT //