Proteomics and two-dimensional electrophoresis databases
The Geneva Proteome Network
Http://www.expasy.ch/
Definition
Biological paradigm
Proteomics goals
Proteome data analysis
First dimension
Second dimension
Gel image
Computer analysis
Visual comparison
Spot detection
Spot quantification
Automatic comparison
Data analysis
Data analysis results
Spot identification
Query database
Experimental data
Protein identification
E. coli master
SWISS-2DPAGE
Federated 2-DE database
Publishing 2-DE data: Make2ddb
Make2ddb: requirements
Master maps
Annotation example
Textual query
Graphical query
Query result
Database structure
Acknowledgements
Messagerie: Christine.Hoogland@isb-sib.ch