AutoDock is a suite of automated docking tools. It is designed to predict how small molecules, such as substrates or drug candidates, bind to a receptor of known 3D structure.

It has applications in:
  X-ray crystallography;
  structure-based drug design;
  lead optimization;
  virtual screening (HTS)
  combinatorial library design
  protein-protein docking
  chemical mechanism studies

You can find it on the MIG platform