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Structural bioinformatics : Databases

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NMR

Name Description Link
made in France NMRb a repository for raw NMR datasets

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Specialized structural databases

Name Description Link
made in France IMGT/3Dstructure-DB immunoglobulins, T receptors and major histocompatibility complex gene and allele identification; Colliers de Perles of PDB data
made in France Rotamer libraries Backbone (in)dependent rotamer libraries homepage
made in France SA-Search search for 3D fragments similar to (fragments of) a query structure SA-Search online
made in France Small compounds project involving the screening of databases of small chemical compounds Project homepage
made in France The knottins web Knottins are small proteins characterized by a very special "disulfide through disulfide knot"
made in France YAKUSA Fast scan of protein structure databases Yakusa online

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PDB

Name Description Link
made in France EBGM PDBdb Yet another tool to explore PDB data... use EBGM-PDBdb online
PDB at MIG
PDB at Pasteur Paris
PDB in Strasbourg
PDB via NPS@
made in France PDBpy A python parser for PDB files homepage
made in France YAKUSA Fast scan of protein structure databases Yakusa online

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