ReNaBI : Tools - Sequencing and cartography

Tools : Sequencing and cartography

Name	Platform	Description	Link
AGMIAL	MIG Jouy	an integrated system for bacterial genome annotation.	webpage
BioMercator	Genoplante-Info	graphical map browser which performs automatic compilations of several genetic maps and computes meta-analysis of QTLs	Homepage
CAP CAP2 CAP3	OUEST-genopole PRABI	Contig assembly program	cap3 home
Cassis	PRABI	methods for precise detection of genomic rearrangement breakpoints	Download Cassis
Consed	MIG Jouy	viewing, editing, and finishing sequence assemblies created with phrap	Consed webpage
CRH_server	OUEST-genopole	Comparative and Radiation Hybrid Server for the Canine Genome	Server homepage
ISLAND	MIG Jouy	Program to simulate the progress of an STS mapping project	webpage
MCQTL	Genoplante-Info	A software application for QTL (Quantitative Trait Loci) mapping in multi-cross design.	webpage
MuGeN	MIG Jouy	a software package for the visual exploration of multiple annotated genome portions.	webpage
Phrap	MIG Jouy	a program for assembling shotgun DNA sequence data	webpage

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