Databases : Genomes
| Name | Platform | Description | Link | |
 |
AcinetoCyc | Genoscope |
A pathway genome database dedicated to Acinetobacter baylyi ADP1 | AcinetoCyc online |
| Bacillus Subtilis complete genome | Pasteur Paris |
Pasteur’s webpage | ||
| Borrelia burgdorferi complete genome | Pasteur Paris |
Pasteur’s webpage | ||
| Caenorhabditis elegans complete genome | Pasteur Paris |
Pasteur’s webpage | ||
| Chlamydia pneumoniae complete genome | Pasteur Paris |
Pasteur’s webpage | ||
|
EMGLib | PRABI |
database devoted to the completely sequenced bacterial genomes and the yeast genome. | website |
| Ensembl | Lille |
a software system which produces and maintains automatic annotation on selected eukaryotic genomes | ENSEMBL website | |
|
Ensembl for SIGENAE | Ensembl : Sigenae EST ContigBrowser (Bos taurus, Gallus gallus, Oncorhynchus mykiss, Sus scrofa, Oryctolagus cuniculus) | Sigenae EST ContigBrowser | |
| Escherichia coli complete genome | Pasteur Paris |
Pasteur’s webpage | ||
|
FLAGdb++ | Integrative database around plant genomes | homepage | |
|
GeM | PRABI |
a comparative mapping database dedicated to all vertebrate complete genome including SNP data detected from ESTs | GeM homepage |
|
Genolevures | Bordeaux |
tools and data relative to 4 complete genome sequences and 10 partial genome sequences | website |
|
GenoList genome browser | Pasteur Paris |
a browser for 21 bacterial genomes | Pasteur’s webpage |
| Helicobacter pylori complete genome | Pasteur Paris |
Pasteur’s webpage | ||
|
Homolens | PRABI |
a database of homologous genes from Ensembl fully sequenced organisms, it allows one to visualize multiple alignments and phylogenetic trees. | Homolens homepage |
|
Human Genome Browser | Lille |
Databases in Lille | |
|
IMGT/GENE-DB | Montpellier |
Database of immunoglobulin and T cell receptor genes | webpage |
|
MaGe | Genoscope |
Magnifying Genomes - Microbial Genome Annotation System | MaGe homepage |
|
MICADO | MIG Jouy |
microbial genomes and functional analysis of Bacillus subtilis | website |
|
MolliGen | Bordeaux |
a database dedicated to the comparative genomics of Mollicutes | webpage |
|
MOSAIC | MIG Jouy |
a relational database and web interface developed to compare closely related bacterial genomes | Mosaic online |
| Mycobacterium tuberculosis complete genome | Pasteur Paris |
Pasteur’s webpage | ||
| Mycoplasma Genitalium complete genome | Pasteur Paris |
Pasteur’s webpage | ||
| Mycoplasma Pneumoniae complete genome | Pasteur Paris |
Pasteur’s webpage | ||
|
Paramecium genome browser | Genoscope |
Paramecium server | |
| Ralstonia solanacearum Strain GMI1000 | Toulouse |
website | ||
|
RicBase | Marseille |
Rickettsia genome database | website |
| Sinorhizobium meliloti strain 1021 | Toulouse |
website | ||
|
Tetraodon genome browser | Genoscope |
browse the smallest genome known to date in the vertebrates | Tetraodon genome browser |
| Tropheryma whipplei genome database | Marseille |
human pathogen Tropheryma whipplei is the only known reduced genome species (<1 Mb) among the Actinobacteria | website | |
| Yeast chromosomes | Pasteur Paris |
Pasteur’s webpage | ||
| Yersinia pestis unfinished genome | Pasteur Paris |
Pasteur’s webpage |
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