References

[Chu89]

G.A. Churchill. Stochastic models for heterogenous DNA sequences. Bulletin of Mathematical Biology, 51(1):79--94, 1989.

[Chu92]

G.A. Churchill. Hidden Markov chains and the analysis of genome structure. Computers Chem., 16(2):107--115, 1992.

[Gué00]

L. Guéguen. Partitionnement maximalement prédictif sous contrainte d'ordre total. Applications aux séquences génétiques. Thèse, Université Pierre et Marie Curie - Paris VI, janvier 2000.

[LGLP92]

F. Larsen, G. Gundersen, R. Lopez, and H. Prydz. CpG islands as gene markers in the human genome. Genomics, 13(4):1095--107, 1992.

[PDM01]

L. Ponger, L. Duret, and D. Mouchiroud. Determinants of cpg islands: expression in early embryo and isochore structure. Genome Res., 11(11):1854--1860, 2001.

[PM01]

L. Ponger and D. Mouchiroud. CpGProD: identifying CpG islands associated with transcription start sites in large genomic mammalian sequences. Bioinformatics, 18:631--633, 2001.

[TJ02]

D. Takai and P.A. Jones. Comprehensive analysis of cpg islands in human chromosomes 21 and 22. PNAS, 99(6):3740--3745, 2002.