Training Set Determination for Genomic Selection
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Documentation for package ‘TSDFGS’ version 3.0.0
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| TSDFGS-package | TSDFGS: Training Set Determination for Genomic Selection |
| aopt_score | A-optimality score |
| avg_grm_minmax_score | Avg_GRM_MinMax score |
| avg_grm_score | Avg_GRM score |
| avg_grm_self_score | Avg_GRM_self score |
| cdmax_score | CDmax score |
| cdmean2_score | CDmean(v2) score |
| cdmean_score | CDmean score (GBLUP form) |
| cd_score | CD-score |
| criteria | List of training set criteria |
| dopt_score | D-optimality score |
| eopt_score | E-optimality score |
| FGCM | Fit logistic growth curve model |
| geno | Genotype information |
| gopt_score | G-optimality score (GOPTPEV) |
| gv_average_score | GVaverage score |
| gv_overall_score | GVoverall score |
| mspe_score | MSPE score of ridge regression |
| nt2r | Simulate r-scores of each training set size |
| optTrain | Optimal training set determination |
| pam_score | PAM (k-medoids) cost |
| pevmax_score | PEVmax score |
| pev_score | PEV score |
| r_score | r-score |
| SSDFGS | Sample size determination for genomic selection |
| subpop | Sub-population information |
| TSDFGS | TSDFGS: Training Set Determination for Genomic Selection |