Tidying and Visualizing Animal Pedigrees


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Documentation for package ‘visPedigree’ version 1.0.1

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big_family_size_ped A large pedigree with big family sizes
deep_ped A deep pedigree
expand_pedmat Expand a Compact Pedigree Matrix to Full Dimensions
inbreed Calculate inbreeding coefficients
loop_ped A pedigree with loops
pedmat Genetic Relationship Matrices and Inbreeding Coefficients
plot.tidyped Plot a tidy pedigree
print.summary.tidyped Print method for summary.tidyped
print.tidyped Print method for tidyped pedigree
query_relationship Query Relationship Coefficients from a Pedigree Matrix
simple_ped A simple pedigree
small_ped A small pedigree
splitped Split Pedigree into Disconnected Groups
summary.tidyped Summary method for tidyped objects
summary_pedmat Summary Statistics for Pedigree Matrices
tidyped Tidy and prepare a pedigree using graph theory
vismat Visualize Relationship Matrices
visped Visualize a tidy pedigree