Package: ct
Type: Package
Title: Camera Trap Data Management and Multi-Method Ecological Analysis
Version: 0.5.0
Date: 2026-10-20
Imports: activity (>= 1.3.4), dplyr (>= 1.1.4), camtrapdp, cli (>=
        3.6.3), Distance (>= 2.0.0), ggplot2 (>= 3.5.2), lubridate,
        magrittr (>= 2.0.3), methods, nloptr, overlap (>= 0.3.9), rlang
        (>= 1.1.5), sbd (>= 0.1.0), tibble, tidyr (>= 1.3.1),
        tidyselect, Rcpp (>= 1.0.8)
Authors@R: c(
    person(given = "Stanislas Mahussi", family = "Gandaho", 
           email = "stangandaho@gmail.com", role = c("aut", "cre"),
           comment = c(ORCID = "0009-0003-4969-1252")
           ),
    person(given = "Pablo", family = "Palencia", 
           email = "palencia.pablo.m@gmail.com", role = c("ctb", "rev"),
           comment = c(ORCID = "0000-0002-2928-4241")
           ),
    person("R Consortium", role = "fnd")
    )
Maintainer: Stanislas Mahussi Gandaho <stangandaho@gmail.com>
Description: Tools for the complete camera trap data workflow in wildlife
    monitoring and ecological research. Reads and edits media metadata, filters
    independent detections, and standardises records for analysis. Measures diel
    activity and overlap (Ridout and Linkie (2009) <doi:10.1198/jabes.2009.08038>),
    directed short-term association between species with an encounter-response
    model (Hawkes (1971) <doi:10.1093/biomet/58.1.83>), seasonal shifts in
    activity, spatial coverage of detections, and species diversity. Estimates
    density or abundance of unmarked
    populations with several methods, including the random encounter model,
    camera trap distance sampling, time-to-event, space-to-event, instantaneous
    sampling, and the random encounter and staying-time model (see
    Rowcliffe et al. (2008) <doi:10.1111/j.1365-2664.2008.01473.x>,
    Howe et al. (2017) <doi:10.1111/2041-210X.12790>,
    Moeller et al. (2018) <doi:10.1002/ecs2.2331>, and
    Nakashima et al. (2018) <doi:10.1111/1365-2664.13059>).
License: MIT + file LICENSE
Encoding: UTF-8
LazyData: true
RoxygenNote: 7.3.2
Suggests: assertr, iNEXT (>= 3.0.2), httr2, glmmTMB, kableExtra (>=
        1.4.0), knitr (>= 1.50), leaflet (>= 2.2.2), lme4, MASS,
        MCMCvis, msm, nimble, coda, progress, rmarkdown, sf, shiny (>=
        1.10.0), terra, testthat (>= 3.0.0), vegan (>= 2.6-6.1), xml2
Config/testthat/edition: 3
URL: https://stangandaho.github.io/ct/
BugReports: https://github.com/stangandaho/ct/issues
Depends: R (>= 3.5)
Config/Needs/website: rmarkdown
LinkingTo: Rcpp
NeedsCompilation: yes
Packaged: 2026-10-21 00:58:35 UTC; ganda
Author: Stanislas Mahussi Gandaho [aut, cre] (ORCID:
    <https://orcid.org/0009-0003-4969-1252>),
  Pablo Palencia [ctb, rev] (ORCID:
    <https://orcid.org/0000-0002-2928-4241>),
  R Consortium [fnd]
Repository: CRAN
Date/Publication: 2026-10-21 17:40:02 UTC
Built: R 4.6.1; x86_64-apple-darwin20; 2026-10-21 20:40:45 UTC; unix
Archs: ct.so.dSYM
