Diagnostic Test Accuracy Meta-Analysis using Template Model
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Documentation for package ‘dtametaTMB’ version 0.1.1
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| dtametaTMB-package | dtametaTMB: Diagnostic Test Accuracy Meta-Analysis using Template Model Builder |
| anaemia | Anaemia (synthetic data set) |
| anova.dtametaTMB | Likelihood Ratio Tests for Diagnostic Test Accuracy Models |
| anova.Reitsma | Likelihood Ratio Tests for Diagnostic Test Accuracy Models |
| anova.ReitsmaLCA | Likelihood Ratio Tests for Diagnostic Test Accuracy Models |
| anova.ReitsmaSubgroup | Likelihood Ratio Tests for Diagnostic Test Accuracy Models |
| anova.ReitsmaSubgroupLCA | Likelihood Ratio Tests for Diagnostic Test Accuracy Models |
| anova.RutterGatsonis | Likelihood Ratio Tests for Diagnostic Test Accuracy Models |
| anova.RutterGatsonisLCA | Likelihood Ratio Tests for Diagnostic Test Accuracy Models |
| anova.RutterGatsonisReg | Likelihood Ratio Tests for Diagnostic Test Accuracy Models |
| anova.RutterGatsonisSubgroup | Likelihood Ratio Tests for Diagnostic Test Accuracy Models |
| anova.RutterGatsonisSubgroupLCA | Likelihood Ratio Tests for Diagnostic Test Accuracy Models |
| anticcp | Anticcp dataset |
| as_revman | Export Model Results for RevMan |
| as_revman.dtametaTMB | Export Model Results for RevMan |
| as_revman.Reitsma | Export Model Results for RevMan |
| as_revman.ReitsmaLCA | Export Model Results for RevMan |
| as_revman.ReitsmaSubgroup | Export Model Results for RevMan |
| as_revman.ReitsmaSubgroupLCA | Export Model Results for RevMan |
| as_revman.RutterGatsonis | Export Model Results for RevMan |
| as_revman.RutterGatsonisLCA | Export Model Results for RevMan |
| as_revman.RutterGatsonisSubgroup | Export Model Results for RevMan |
| as_revman.RutterGatsonisSubgroupLCA | Export Model Results for RevMan |
| diabetes | Diabetes dataset |
| dtametaTMB | dtametaTMB: Diagnostic Test Accuracy Meta-Analysis using Template Model Builder |
| FENO | FENO dataset |
| fitHoyer | Fit Threshold-Based Bivariate Time-to-Event Model (Hoyer) |
| fitHoyerAFT | Fit Threshold-Based Bivariate Time-to-Event Model (Hoyer AFT) |
| fitReitsma | Fit Reitsma Model |
| fitReitsmaLCA | Fit Reitsma LCA Model |
| fitReitsmaSubgroup | Fit Reitsma Subgroup Model |
| fitReitsmaSubgroupLCA | Fit Reitsma Subgroup LCA Model |
| fitRutterGatsonis | Fit the Rutter and Gatsonis (HSROC) model |
| fitRutterGatsonisLCA | Fit Rutter and Gatsonis LCA Model |
| fitRutterGatsonisReg | Fit the Rutter and Gatsonis Regression Model |
| fitRutterGatsonisSubgroup | Fit the Rutter and Gatsonis Subgroup Model |
| fitRutterGatsonisSubgroupLCA | Fit the Rutter and Gatsonis Subgroup LCA Model |
| forest | Forest plot generic |
| forest.Cochrane | Coupled Forest plot for diagnostic test accuracy meta-analysis |
| forest.CochraneLCA | Coupled Forest plot for latent class diagnostic test accuracy meta-analysis |
| forest.CochraneSubgroup | Coupled Forest plot for diagnostic test accuracy meta-analysis |
| forest.CochraneSubgroupLCA | Coupled Forest plot for latent class diagnostic test accuracy meta-analysis |
| initHoyerAFT | Compute Initial Parameter Values for Hoyer AFT Models |
| logLik.dtametaTMB | Extract Log-Likelihood from Diagnostic Test Accuracy Models |
| logLik.HoyerAFT | Extract Log-Likelihood from Diagnostic Test Accuracy Models |
| logLik.Reitsma | Extract Log-Likelihood from Diagnostic Test Accuracy Models |
| logLik.ReitsmaLCA | Extract Log-Likelihood from Diagnostic Test Accuracy Models |
| logLik.ReitsmaSubgroup | Extract Log-Likelihood from Diagnostic Test Accuracy Models |
| logLik.ReitsmaSubgroupLCA | Extract Log-Likelihood from Diagnostic Test Accuracy Models |
| logLik.RutterGatsonis | Extract Log-Likelihood from Diagnostic Test Accuracy Models |
| logLik.RutterGatsonisLCA | Extract Log-Likelihood from Diagnostic Test Accuracy Models |
| logLik.RutterGatsonisReg | Extract Log-Likelihood from Diagnostic Test Accuracy Models |
| logLik.RutterGatsonisSubgroup | Extract Log-Likelihood from Diagnostic Test Accuracy Models |
| logLik.RutterGatsonisSubgroupLCA | Extract Log-Likelihood from Diagnostic Test Accuracy Models |
| pap | pap dataset |
| plot.HoyerAFT | Plot Results from a Hoyer Model |
| plot.Reitsma | Plot Results from a Reitsma Model |
| plot.ReitsmaLCA | Plot Results from a Reitsma LCA Model |
| plot.ReitsmaSubgroup | Plot Results from a Reitsma Subgroup Model |
| plot.ReitsmaSubgroupLCA | Plot Results from a Reitsma Subgroup LCA Model |
| plot.RutterGatsonis | Plot Results from a Rutter and Gatsonis Model |
| plot.RutterGatsonisLCA | Plot Results from a Rutter and Gatsonis LCA Model |
| plot.RutterGatsonisSubgroup | Plot Results from a Rutter and Gatsonis Subgroup Model |
| plot.RutterGatsonisSubgroupLCA | Plot Results from a Rutter and Gatsonis Subgroup LCA Model |
| print.HoyerAFT | Print Hoyer AFT Model Object |
| print.Reitsma | Print Method for Reitsma Objects |
| print.ReitsmaLCA | Print Method for ReitsmaLCA Objects |
| print.ReitsmaSubgroup | Print Method for ReitsmaSubgroup Objects |
| print.ReitsmaSubgroupLCA | Print Method for ReitsmaSubgroupLCA Objects |
| print.RutterGatsonis | Print Method for RutterGatsonis Objects |
| print.RutterGatsonisLCA | Print Method for RutterGatsonisLCA Objects |
| print.RutterGatsonisReg | Print Method for RutterGatsonisReg Objects |
| print.RutterGatsonisSubgroup | Print Method for RutterGatsonisSubgroup Objects |
| print.RutterGatsonisSubgroupLCA | Print Method for RutterGatsonisSubgroupLCA Objects |
| restructure_data | Construct Interval Data for Threshold-Based Bivariate Time-to-Event Models |
| RF | RF dataset |
| schuetz | Schuetz dataset |
| summary.HoyerAFT | Summary Method for HoyerAFT Objects |
| summary.Reitsma | Summary Method for Reitsma Objects |
| summary.ReitsmaLCA | Summary Method for ReitsmaLCA Objects |
| summary.ReitsmaSubgroup | Summary Method for ReitsmaSubgroup Objects |
| summary.ReitsmaSubgroupLCA | Summary Method for ReitsmaSubgroupLCA Objects |
| summary.RutterGatsonis | Summary Method for RutterGatsonis Objects |
| summary.RutterGatsonisLCA | Summary Method for RutterGatsonisLCA Objects |
| summary.RutterGatsonisReg | Summary Method for RutterGatsonisReg Objects |
| summary.RutterGatsonisSubgroup | Summary Method for RutterGatsonisSubgroup Objects |
| summary.RutterGatsonisSubgroupLCA | Summary Method for RutterGatsonisSubgroupLCA Objects |
| tub | tub dataset |